RNA–Protein interactions for RNA: ENST00000569904.5

SCAMP2-212, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 858 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-212ENST00000569904 MSH5O43196 834 aa16.93■□□□□ 0.3
SCAMP2-212ENST00000569904 PLEKHO1Q53GL0 409 aaPredicted RBP16.93■□□□□ 0.3
SCAMP2-212ENST00000569904 LINC00116Q8NCU8 138 aa16.93■□□□□ 0.3
SCAMP2-212ENST00000569904 NLGN2Q8NFZ4 835 aa16.93■□□□□ 0.3
SCAMP2-212ENST00000569904 ADAMTS7Q9UKP4 1686 aa16.92■□□□□ 0.3
SCAMP2-212ENST00000569904 KIF13BQ9NQT8 1826 aa16.92■□□□□ 0.3
SCAMP2-212ENST00000569904 IL13P35225 146 aa16.92■□□□□ 0.3
SCAMP2-212ENST00000569904 ITPK1Q13572 414 aa16.92■□□□□ 0.3
SCAMP2-212ENST00000569904 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 MYH14Q7Z406 1995 aaKnown RBP16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 ATP6V1AP38606 617 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 GPR162Q16538 588 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 MSL1Q68DK7 614 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 AEBP1Q8IUX7 1158 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 CD2APQ9Y5K6 639 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 C4AP0C0L4 1744 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 TJP1Q07157 1748 aa16.9■□□□□ 0.3
SCAMP2-212ENST00000569904 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.29
SCAMP2-212ENST00000569904 SLC4A9Q96Q91 983 aa16.89■□□□□ 0.29
SCAMP2-212ENST00000569904 MRC1P22897 1456 aa16.88■□□□□ 0.29
SCAMP2-212ENST00000569904 SULT6B1Q6IMI4 303 aa16.88■□□□□ 0.29
SCAMP2-212ENST00000569904 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
SCAMP2-212ENST00000569904 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
SCAMP2-212ENST00000569904 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
SCAMP2-212ENST00000569904 PHF14O94880 888 aa16.86■□□□□ 0.29
SCAMP2-212ENST00000569904 MTHFSP49914 203 aa16.86■□□□□ 0.29
SCAMP2-212ENST00000569904 CNTNAP4Q9C0A0 1308 aa16.86■□□□□ 0.29
SCAMP2-212ENST00000569904 COL3A1P02461 1466 aaPredicted RBP16.86■□□□□ 0.29
SCAMP2-212ENST00000569904 GNPATO15228 680 aa16.85■□□□□ 0.29
SCAMP2-212ENST00000569904 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
SCAMP2-212ENST00000569904 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.293e-7■□□□□ 9.4
SCAMP2-212ENST00000569904 C1orf141Q5JVX7 400 aa16.85■□□□□ 0.29
SCAMP2-212ENST00000569904 SMIM5Q71RC9 77 aa16.85■□□□□ 0.29
SCAMP2-212ENST00000569904 ADRA2BP18089 450 aa16.84■□□□□ 0.29
SCAMP2-212ENST00000569904 CABP4P57796 275 aa16.84■□□□□ 0.29
SCAMP2-212ENST00000569904 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
SCAMP2-212ENST00000569904 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
SCAMP2-212ENST00000569904 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
SCAMP2-212ENST00000569904 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
SCAMP2-212ENST00000569904 RTCBQ9Y3I0 505 aaKnown RBP16.82■□□□□ 0.28
SCAMP2-212ENST00000569904 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
SCAMP2-212ENST00000569904 TRAPPC3LQ5T215 181 aa16.81■□□□□ 0.28
SCAMP2-212ENST00000569904 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
SCAMP2-212ENST00000569904 SIPA1L3O60292 1781 aaPredicted RBP16.81■□□□□ 0.28
SCAMP2-212ENST00000569904 KCPQ6ZWJ8 1503 aa16.8■□□□□ 0.28
SCAMP2-212ENST00000569904 N4BP2Q86UW6 1770 aaPredicted RBP16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 DIAPH1O60610 1272 aaKnown RBP16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 PELP1Q8IZL8 1130 aaKnown RBP16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 NLGN1Q8N2Q7 840 aa16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 ARHGEF1Q92888 912 aaKnown RBP16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 SLC52A2Q9HAB3 445 aa16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 C10orf71Q711Q0 1435 aa16.79■□□□□ 0.28
SCAMP2-212ENST00000569904 MMP10P09238 476 aa16.77■□□□□ 0.28
SCAMP2-212ENST00000569904 HMOX1P09601 288 aa16.77■□□□□ 0.28
SCAMP2-212ENST00000569904 GYS1P13807 737 aa16.77■□□□□ 0.28
SCAMP2-212ENST00000569904 PXDNLA1KZ92 1463 aa16.77■□□□□ 0.28
SCAMP2-212ENST00000569904 ADCY9O60503 1353 aa16.77■□□□□ 0.27
SCAMP2-212ENST00000569904 RNMTO43148 476 aaKnown RBP16.76■□□□□ 0.27
SCAMP2-212ENST00000569904 PTCD1O75127 700 aaKnown RBP16.76■□□□□ 0.27
SCAMP2-212ENST00000569904 CRKLP46109 303 aaKnown RBP16.76■□□□□ 0.27
SCAMP2-212ENST00000569904 MTHFSDQ2M296 383 aaKnown RBP16.76■□□□□ 0.27
SCAMP2-212ENST00000569904 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
SCAMP2-212ENST00000569904 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
SCAMP2-212ENST00000569904 RFC4P35249 363 aa16.74■□□□□ 0.27
SCAMP2-212ENST00000569904 TGFB2P61812 414 aa16.74■□□□□ 0.27
SCAMP2-212ENST00000569904 NRXN2Q9P2S2 1712 aa16.73■□□□□ 0.27
SCAMP2-212ENST00000569904 USP42Q9H9J4 1324 aaKnown RBP16.73■□□□□ 0.27
SCAMP2-212ENST00000569904 INTS5Q6P9B9 1019 aaKnown RBP16.73■□□□□ 0.27
SCAMP2-212ENST00000569904 VSIG10Q8N0Z9 540 aa16.73■□□□□ 0.27
SCAMP2-212ENST00000569904 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
SCAMP2-212ENST00000569904 AFDNP55196 1824 aaKnown RBP16.71■□□□□ 0.27
SCAMP2-212ENST00000569904 SOS1Q07889 1333 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-212ENST00000569904 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
SCAMP2-212ENST00000569904 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-212ENST00000569904 DNAJC10Q8IXB1 793 aa16.7■□□□□ 0.26
SCAMP2-212ENST00000569904 CCDC87Q9NVE4 849 aa16.7■□□□□ 0.26
SCAMP2-212ENST00000569904 CEMIPQ8WUJ3 1361 aa16.69■□□□□ 0.26
SCAMP2-212ENST00000569904 SLC39A6Q13433 755 aa16.69■□□□□ 0.26
SCAMP2-212ENST00000569904 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
SCAMP2-212ENST00000569904 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
SCAMP2-212ENST00000569904 DLEC1Q9Y238 1755 aa16.69■□□□□ 0.26
SCAMP2-212ENST00000569904 GIGYF1O75420 1035 aaPredicted RBP16.68■□□□□ 0.26
SCAMP2-212ENST00000569904 FKBP8Q14318 412 aa16.68■□□□□ 0.26
SCAMP2-212ENST00000569904 SCN7AQ01118 1682 aa16.67■□□□□ 0.26
SCAMP2-212ENST00000569904 TM4SF1P30408 202 aa16.67■□□□□ 0.26
SCAMP2-212ENST00000569904 IL17REQ8NFR9 667 aa16.67■□□□□ 0.26
SCAMP2-212ENST00000569904 SRP68Q9UHB9 627 aaKnown RBP16.67■□□□□ 0.26
SCAMP2-212ENST00000569904 COL15A1P39059 1388 aa16.66■□□□□ 0.26
SCAMP2-212ENST00000569904 GNAT3A8MTJ3 354 aa16.66■□□□□ 0.26
SCAMP2-212ENST00000569904 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
SCAMP2-212ENST00000569904 KCNA3P22001 575 aa16.66■□□□□ 0.26
SCAMP2-212ENST00000569904 DDR1Q08345 913 aa16.66■□□□□ 0.26
SCAMP2-212ENST00000569904 RSPH6AQ9H0K4 717 aa16.66■□□□□ 0.26
SCAMP2-212ENST00000569904 A0A0G2JLW4 131 aa16.65■□□□□ 0.26
SCAMP2-212ENST00000569904 POLRMTO00411 1230 aaKnown RBP16.65■□□□□ 0.26
SCAMP2-212ENST00000569904 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
SCAMP2-212ENST00000569904 NARFQ9UHQ1 456 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms