RNA–Protein interactions for RNA: ENST00000569769.1

SPSB3-212, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-212ENST00000569769 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
SPSB3-212ENST00000569769 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
SPSB3-212ENST00000569769 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
SPSB3-212ENST00000569769 KDRP35968 1356 aa16.99■□□□□ 0.31
SPSB3-212ENST00000569769 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
SPSB3-212ENST00000569769 SIK1P57059 783 aa16.98■□□□□ 0.31
SPSB3-212ENST00000569769 SULT6B1Q6IMI4 303 aa16.98■□□□□ 0.31
SPSB3-212ENST00000569769 MYH14Q7Z406 1995 aaKnown RBP16.97■□□□□ 0.31
SPSB3-212ENST00000569769 DIAPH1O60610 1272 aaKnown RBP16.97■□□□□ 0.31
SPSB3-212ENST00000569769 ITPK1Q13572 414 aa16.97■□□□□ 0.31
SPSB3-212ENST00000569769 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
SPSB3-212ENST00000569769 COL5A3P25940 1745 aaPredicted RBP16.96■□□□□ 0.31
SPSB3-212ENST00000569769 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.96■□□□□ 0.31
SPSB3-212ENST00000569769 ATG3Q9NT62 314 aa16.96■□□□□ 0.31
SPSB3-212ENST00000569769 SCN11AQ9UI33 1791 aa16.95■□□□□ 0.3
SPSB3-212ENST00000569769 YBX3P16989 372 aaKnown RBP eCLIP16.95■□□□□ 0.3
SPSB3-212ENST00000569769 ATP6V1AP38606 617 aa16.95■□□□□ 0.3
SPSB3-212ENST00000569769 FLAD1Q8NFF5 587 aa16.95■□□□□ 0.3
SPSB3-212ENST00000569769 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
SPSB3-212ENST00000569769 HMOX1P09601 288 aa16.94■□□□□ 0.3
SPSB3-212ENST00000569769 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
SPSB3-212ENST00000569769 GNPATO15228 680 aa16.93■□□□□ 0.3
SPSB3-212ENST00000569769 CFAP53Q96M91 514 aa16.93■□□□□ 0.3
SPSB3-212ENST00000569769 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
SPSB3-212ENST00000569769 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
SPSB3-212ENST00000569769 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
SPSB3-212ENST00000569769 SLC4A9Q96Q91 983 aa16.92■□□□□ 0.3
SPSB3-212ENST00000569769 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
SPSB3-212ENST00000569769 WWC3Q9ULE0 1092 aa16.92■□□□□ 0.3
SPSB3-212ENST00000569769 C4AP0C0L4 1744 aa16.92■□□□□ 0.3
SPSB3-212ENST00000569769 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
SPSB3-212ENST00000569769 SSFA2P28290 1259 aa16.91■□□□□ 0.3
SPSB3-212ENST00000569769 N4BP2Q86UW6 1770 aaPredicted RBP16.9■□□□□ 0.3
SPSB3-212ENST00000569769 ERVV-2B6SEH9 535 aa16.9■□□□□ 0.3
SPSB3-212ENST00000569769 HMGB2P26583 209 aaKnown RBP16.9■□□□□ 0.3
SPSB3-212ENST00000569769 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
SPSB3-212ENST00000569769 AMOTQ4VCS5 1084 aa16.89■□□□□ 0.29
SPSB3-212ENST00000569769 TJP1Q07157 1748 aa16.89■□□□□ 0.29
SPSB3-212ENST00000569769 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
SPSB3-212ENST00000569769 CABP4P57796 275 aa16.88■□□□□ 0.29
SPSB3-212ENST00000569769 RALBP1Q15311 655 aa16.88■□□□□ 0.29
SPSB3-212ENST00000569769 CD2APQ9Y5K6 639 aa16.88■□□□□ 0.29
SPSB3-212ENST00000569769 KIF13BQ9NQT8 1826 aa16.88■□□□□ 0.29
SPSB3-212ENST00000569769 C1orf141Q5JVX7 400 aa16.87■□□□□ 0.29
SPSB3-212ENST00000569769 KIAA1551Q9HCM1 1747 aa16.87■□□□□ 0.29
SPSB3-212ENST00000569769 PTCD1O75127 700 aaKnown RBP16.86■□□□□ 0.29
SPSB3-212ENST00000569769 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
SPSB3-212ENST00000569769 GRIN3BO60391 1043 aa16.85■□□□□ 0.29
SPSB3-212ENST00000569769 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
SPSB3-212ENST00000569769 NUDCQ9Y266 331 aa16.85■□□□□ 0.29
SPSB3-212ENST00000569769 MMP10P09238 476 aa16.84■□□□□ 0.29
SPSB3-212ENST00000569769 U2AF1L5P0DN76 240 aaPredicted RBP16.84■□□□□ 0.29
SPSB3-212ENST00000569769 U2AF1Q01081 240 aaKnown RBP eCLIP16.84■□□□□ 0.29
SPSB3-212ENST00000569769 MTHFSDQ2M296 383 aaKnown RBP16.84■□□□□ 0.29
SPSB3-212ENST00000569769 RSPH6AQ9H0K4 717 aa16.84■□□□□ 0.29
SPSB3-212ENST00000569769 RTCBQ9Y3I0 505 aaKnown RBP16.84■□□□□ 0.29
SPSB3-212ENST00000569769 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
SPSB3-212ENST00000569769 CEP350Q5VT06 3117 aa16.83■□□□□ 0.29
SPSB3-212ENST00000569769 PRKAR2BP31323 418 aa16.83■□□□□ 0.28
SPSB3-212ENST00000569769 TRAPPC3LQ5T215 181 aa16.83■□□□□ 0.28
SPSB3-212ENST00000569769 PRKRIP1Q9H875 184 aaPredicted RBP16.83■□□□□ 0.28
SPSB3-212ENST00000569769 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
SPSB3-212ENST00000569769 AKAP4Q5JQC9 854 aa16.82■□□□□ 0.28
SPSB3-212ENST00000569769 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
SPSB3-212ENST00000569769 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
SPSB3-212ENST00000569769 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
SPSB3-212ENST00000569769 PHACTR3Q96KR7 559 aa16.81■□□□□ 0.28
SPSB3-212ENST00000569769 LGR6Q9HBX8 967 aa16.81■□□□□ 0.28
SPSB3-212ENST00000569769 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
SPSB3-212ENST00000569769 C1QTNF8P60827 252 aa16.8■□□□□ 0.28
SPSB3-212ENST00000569769 RC3H1Q5TC82 1133 aaKnown RBP16.8■□□□□ 0.28
SPSB3-212ENST00000569769 MRC1P22897 1456 aa16.8■□□□□ 0.28
SPSB3-212ENST00000569769 ATP10DQ9P241 1426 aa16.79■□□□□ 0.28
SPSB3-212ENST00000569769 GYS1P13807 737 aa16.79■□□□□ 0.28
SPSB3-212ENST00000569769 RFC4P35249 363 aa16.79■□□□□ 0.28
SPSB3-212ENST00000569769 CRKLP46109 303 aaKnown RBP16.79■□□□□ 0.28
SPSB3-212ENST00000569769 PXDNLA1KZ92 1463 aa16.79■□□□□ 0.28
SPSB3-212ENST00000569769 GIGYF1O75420 1035 aaPredicted RBP16.78■□□□□ 0.28
SPSB3-212ENST00000569769 SLC39A6Q13433 755 aa16.78■□□□□ 0.28
SPSB3-212ENST00000569769 SRP68Q9UHB9 627 aaKnown RBP16.78■□□□□ 0.28
SPSB3-212ENST00000569769 UBR2Q8IWV8 1755 aa16.78■□□□□ 0.28
SPSB3-212ENST00000569769 SENP3-EIF4A1A0A087X0R7 540 aa16.77■□□□□ 0.28
SPSB3-212ENST00000569769 RNMTO43148 476 aaKnown RBP16.77■□□□□ 0.28
SPSB3-212ENST00000569769 FCHSD2O94868 740 aa16.77■□□□□ 0.28
SPSB3-212ENST00000569769 ADRA2BP18089 450 aa16.77■□□□□ 0.28
SPSB3-212ENST00000569769 GAS2L2Q8NHY3 880 aa16.77■□□□□ 0.28
SPSB3-212ENST00000569769 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
SPSB3-212ENST00000569769 C10orf71Q711Q0 1435 aa16.77■□□□□ 0.27
SPSB3-212ENST00000569769 AFDNP55196 1824 aaKnown RBP16.77■□□□□ 0.27
SPSB3-212ENST00000569769 KCPQ6ZWJ8 1503 aa16.76■□□□□ 0.27
SPSB3-212ENST00000569769 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
SPSB3-212ENST00000569769 NLGN1Q8N2Q7 840 aa16.76■□□□□ 0.27
SPSB3-212ENST00000569769 ZNF526Q8TF50 670 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-212ENST00000569769 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-212ENST00000569769 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
SPSB3-212ENST00000569769 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
SPSB3-212ENST00000569769 ADCY9O60503 1353 aa16.75■□□□□ 0.27
SPSB3-212ENST00000569769 ARFGEF1Q9Y6D6 1849 aa16.75■□□□□ 0.27
SPSB3-212ENST00000569769 GNAT3A8MTJ3 354 aa16.74■□□□□ 0.27
SPSB3-212ENST00000569769 FKBP8Q14318 412 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms