RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 IL13P35225 146 aa18.97■□□□□ 0.63
GTF3C1-211ENST00000569653 KNSTRNQ9Y448 316 aa18.96■□□□□ 0.63
GTF3C1-211ENST00000569653 ZNF530Q6P9A1 599 aaPredicted RBP18.95■□□□□ 0.62
GTF3C1-211ENST00000569653 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.94■□□□□ 0.62
GTF3C1-211ENST00000569653 PHF14O94880 888 aa18.94■□□□□ 0.62
GTF3C1-211ENST00000569653 AK7Q96M32 723 aa18.94■□□□□ 0.62
GTF3C1-211ENST00000569653 TJP1Q07157 1748 aa18.94■□□□□ 0.62
GTF3C1-211ENST00000569653 YBX3P16989 372 aaKnown RBP eCLIP18.93■□□□□ 0.622e-6■■■■□ 23.6
GTF3C1-211ENST00000569653 SULT6B1Q6IMI4 303 aa18.93■□□□□ 0.62
GTF3C1-211ENST00000569653 C4AP0C0L4 1744 aa18.93■□□□□ 0.62
GTF3C1-211ENST00000569653 PLEKHO1Q53GL0 409 aaPredicted RBP18.92■□□□□ 0.62
GTF3C1-211ENST00000569653 ZNF784Q8NCA9 323 aaPredicted RBP18.92■□□□□ 0.62
GTF3C1-211ENST00000569653 COL3A1P02461 1466 aaPredicted RBP18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 ERVV-2B6SEH9 535 aa18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 ATP6V1AP38606 617 aa18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 MTHFSP49914 203 aa18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 GPR162Q16538 588 aa18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 FLAD1Q8NFF5 587 aa18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 DCAF5Q96JK2 942 aa18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
GTF3C1-211ENST00000569653 CICQ96RK0 1608 aaPredicted RBP18.9■□□□□ 0.62
GTF3C1-211ENST00000569653 ADAMTS7Q9UKP4 1686 aa18.9■□□□□ 0.62
GTF3C1-211ENST00000569653 GNPATO15228 680 aa18.9■□□□□ 0.62
GTF3C1-211ENST00000569653 SSFA2P28290 1259 aa18.89■□□□□ 0.61
GTF3C1-211ENST00000569653 AMOTQ4VCS5 1084 aa18.89■□□□□ 0.61
GTF3C1-211ENST00000569653 CC2D1BQ5T0F9 858 aaKnown RBP18.89■□□□□ 0.61
GTF3C1-211ENST00000569653 KIF13BQ9NQT8 1826 aa18.88■□□□□ 0.61
GTF3C1-211ENST00000569653 PELP1Q8IZL8 1130 aaKnown RBP18.88■□□□□ 0.61
GTF3C1-211ENST00000569653 MRC1P22897 1456 aa18.86■□□□□ 0.61
GTF3C1-211ENST00000569653 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
GTF3C1-211ENST00000569653 RBM42Q9BTD8 480 aaKnown RBP18.86■□□□□ 0.61
GTF3C1-211ENST00000569653 HMOX1P09601 288 aa18.85■□□□□ 0.61
GTF3C1-211ENST00000569653 CABP4P57796 275 aa18.85■□□□□ 0.61
GTF3C1-211ENST00000569653 NFATC2IPQ8NCF5 419 aa18.85■□□□□ 0.61
GTF3C1-211ENST00000569653 CD2APQ9Y5K6 639 aa18.85■□□□□ 0.61
GTF3C1-211ENST00000569653 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
GTF3C1-211ENST00000569653 CNTNAP4Q9C0A0 1308 aa18.84■□□□□ 0.61
GTF3C1-211ENST00000569653 LGR6Q9HBX8 967 aa18.84■□□□□ 0.61
GTF3C1-211ENST00000569653 N4BP2Q86UW6 1770 aaPredicted RBP18.83■□□□□ 0.61
GTF3C1-211ENST00000569653 C1orf141Q5JVX7 400 aa18.83■□□□□ 0.6
GTF3C1-211ENST00000569653 PTCD1O75127 700 aaKnown RBP18.82■□□□□ 0.6
GTF3C1-211ENST00000569653 HMGB2P26583 209 aaKnown RBP18.82■□□□□ 0.6
GTF3C1-211ENST00000569653 CNGB1Q14028 1251 aaPredicted RBP18.82■□□□□ 0.6
GTF3C1-211ENST00000569653 KCPQ6ZWJ8 1503 aa18.82■□□□□ 0.6
GTF3C1-211ENST00000569653 UBR2Q8IWV8 1755 aa18.82■□□□□ 0.6
GTF3C1-211ENST00000569653 MTHFSDQ2M296 383 aaKnown RBP18.81■□□□□ 0.6
GTF3C1-211ENST00000569653 RC3H1Q5TC82 1133 aaKnown RBP18.81■□□□□ 0.6
GTF3C1-211ENST00000569653 ARHGEF1Q92888 912 aaKnown RBP18.81■□□□□ 0.6
GTF3C1-211ENST00000569653 WWC3Q9ULE0 1092 aa18.81■□□□□ 0.6
GTF3C1-211ENST00000569653 SIPA1L3O60292 1781 aaPredicted RBP18.81■□□□□ 0.6
GTF3C1-211ENST00000569653 BRCA1P38398 1863 aaKnown RBP18.8■□□□□ 0.6
GTF3C1-211ENST00000569653 MMP10P09238 476 aa18.8■□□□□ 0.6
GTF3C1-211ENST00000569653 AKAP4Q5JQC9 854 aa18.8■□□□□ 0.6
GTF3C1-211ENST00000569653 PXDNLA1KZ92 1463 aa18.79■□□□□ 0.6
GTF3C1-211ENST00000569653 DIAPH1O60610 1272 aaKnown RBP18.79■□□□□ 0.6
GTF3C1-211ENST00000569653 RPS6KA4O75676 772 aa18.79■□□□□ 0.6
GTF3C1-211ENST00000569653 RTCBQ9Y3I0 505 aaKnown RBP18.79■□□□□ 0.6
GTF3C1-211ENST00000569653 RNMTO43148 476 aaKnown RBP18.78■□□□□ 0.6
GTF3C1-211ENST00000569653 GYS1P13807 737 aa18.78■□□□□ 0.6
GTF3C1-211ENST00000569653 CRKLP46109 303 aaKnown RBP18.78■□□□□ 0.6
GTF3C1-211ENST00000569653 TRAPPC3LQ5T215 181 aa18.78■□□□□ 0.6
GTF3C1-211ENST00000569653 SLC52A2Q9HAB3 445 aa18.78■□□□□ 0.6
GTF3C1-211ENST00000569653 C10orf71Q711Q0 1435 aa18.77■□□□□ 0.6
GTF3C1-211ENST00000569653 SLC39A6Q13433 755 aa18.77■□□□□ 0.6
GTF3C1-211ENST00000569653 INTS5Q6P9B9 1019 aaKnown RBP18.77■□□□□ 0.6
GTF3C1-211ENST00000569653 DNAJC10Q8IXB1 793 aa18.76■□□□□ 0.59
GTF3C1-211ENST00000569653 SRP68Q9UHB9 627 aaKnown RBP18.76■□□□□ 0.59
GTF3C1-211ENST00000569653 ADRA2BP18089 450 aa18.75■□□□□ 0.59
GTF3C1-211ENST00000569653 ADCY9O60503 1353 aa18.74■□□□□ 0.59
GTF3C1-211ENST00000569653 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
GTF3C1-211ENST00000569653 USP42Q9H9J4 1324 aaKnown RBP18.73■□□□□ 0.59
GTF3C1-211ENST00000569653 AFDNP55196 1824 aaKnown RBP18.72■□□□□ 0.59
GTF3C1-211ENST00000569653 RFC4P35249 363 aa18.72■□□□□ 0.59
GTF3C1-211ENST00000569653 DDR1Q08345 913 aa18.72■□□□□ 0.59
GTF3C1-211ENST00000569653 FKBP8Q14318 412 aa18.72■□□□□ 0.59
GTF3C1-211ENST00000569653 NLGN1Q8N2Q7 840 aa18.72■□□□□ 0.59
GTF3C1-211ENST00000569653 ATP10DQ9P241 1426 aa18.72■□□□□ 0.59
GTF3C1-211ENST00000569653 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.59
GTF3C1-211ENST00000569653 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
GTF3C1-211ENST00000569653 CYP19A1P11511 503 aaPredicted RBP18.7■□□□□ 0.58
GTF3C1-211ENST00000569653 IL17REQ8NFR9 667 aa18.7■□□□□ 0.58
GTF3C1-211ENST00000569653 PHACTR3Q96KR7 559 aa18.7■□□□□ 0.58
GTF3C1-211ENST00000569653 A0A0G2JLW4 131 aa18.69■□□□□ 0.58
GTF3C1-211ENST00000569653 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
GTF3C1-211ENST00000569653 ARFGEF1Q9Y6D6 1849 aa18.69■□□□□ 0.58
GTF3C1-211ENST00000569653 NRXN2Q9P2S2 1712 aa18.69■□□□□ 0.58
GTF3C1-211ENST00000569653 C1QTNF8P60827 252 aa18.68■□□□□ 0.58
GTF3C1-211ENST00000569653 RSPH6AQ9H0K4 717 aa18.68■□□□□ 0.58
GTF3C1-211ENST00000569653 ZBTB1Q9Y2K1 713 aa18.68■□□□□ 0.58
GTF3C1-211ENST00000569653 CEP350Q5VT06 3117 aa18.68■□□□□ 0.58
GTF3C1-211ENST00000569653 DPEP1P16444 411 aa18.67■□□□□ 0.58
GTF3C1-211ENST00000569653 KCNA3P22001 575 aa18.67■□□□□ 0.58
GTF3C1-211ENST00000569653 PPP2R1AP30153 589 aa18.67■□□□□ 0.58
GTF3C1-211ENST00000569653 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
GTF3C1-211ENST00000569653 CEMIPQ8WUJ3 1361 aa18.66■□□□□ 0.58
GTF3C1-211ENST00000569653 TM4SF1P30408 202 aa18.65■□□□□ 0.58
GTF3C1-211ENST00000569653 PRKAR2BP31323 418 aa18.65■□□□□ 0.58
GTF3C1-211ENST00000569653 USPL1Q5W0Q7 1092 aa18.65■□□□□ 0.58
GTF3C1-211ENST00000569653 COL15A1P39059 1388 aa18.65■□□□□ 0.58
GTF3C1-211ENST00000569653 SCN7AQ01118 1682 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms