RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 YEATS4O95619 227 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 EPS15P42566 896 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 ME1P48163 572 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 ENOX2Q16206 610 aaKnown RBP8.26□□□□□ -1.09
CNOT1-216ENST00000569240 MSL1Q68DK7 614 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 MROH2BQ7Z745 1585 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 EFCAB5A4FU69 1503 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 SLC8A1P32418 973 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 CFAP100Q494V2 611 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 MICALL1Q8N3F8 863 aa8.26□□□□□ -1.09
CNOT1-216ENST00000569240 NPHP1O15259 732 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 LUC7L2Q9Y383 392 aaKnown RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 LRCH2Q5VUJ6 765 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 BLOC1S2Q6QNY1 142 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 CEP120Q8N960 986 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 CTAGE1Q96RT6 745 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 CTNNA3Q9UI47 895 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 GNAI2P04899 355 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 ZFYP08048 801 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 CETN2P41208 172 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 FOXD4L6Q3SYB3 417 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 FOXD4L3Q6VB84 417 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 CACNA2D4Q7Z3S7 1137 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 VCXQ9H320 206 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 RRAGDQ9NQL2 400 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 CEP83Q9Y592 693 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 IFI16Q16666 785 aaKnown RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 DAAM2Q86T65 1068 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.25□□□□□ -1.095e-7■■■■□ 21.4
CNOT1-216ENST00000569240 CFAP57Q96MR6 1250 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 RSPH14Q9UHP6 348 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 VGFO15240 615 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 ZNF165P49910 485 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 HMGB1P1B2RPK0 211 aaPredicted RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 LUC7L3O95232 432 aaKnown RBP8.25□□□□□ -1.09
CNOT1-216ENST00000569240 GOLGA5Q8TBA6 731 aa8.25□□□□□ -1.09
CNOT1-216ENST00000569240 HOOK3Q86VS8 718 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 RPGRIP1Q96KN7 1286 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 LIMCH1Q9UPQ0 1083 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 RAD50Q92878 1312 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 RAB11FIP3O75154 756 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 STAMBPO95630 424 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 CCDC172P0C7W6 258 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 RPGRIP1LQ68CZ1 1315 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 TCP11L2Q8N4U5 519 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 PDRG1Q9NUG6 133 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 FAM184BQ9ULE4 1060 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 UBTFL1P0CB47 393 aaPredicted RBP8.24□□□□□ -1.09
CNOT1-216ENST00000569240 VPS36Q86VN1 386 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 C10orf67Q8IYJ2 551 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 SPATS2LQ9NUQ6 558 aaKnown RBP8.24□□□□□ -1.09
CNOT1-216ENST00000569240 TRIM22Q8IYM9 498 aa8.24□□□□□ -1.09
CNOT1-216ENST00000569240 SPDYE4A6NLX3 237 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 GIGYF1O75420 1035 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-216ENST00000569240 LACTBP83111 547 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-216ENST00000569240 IFFO1Q0D2I5 559 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 BCL2L13Q9BXK5 485 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 IMPACTQ9P2X3 320 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 TICAM2Q86XR7 235 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 FAM76AQ8TAV0 307 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.23□□□□□ -1.095e-7■■□□□ 11.5
CNOT1-216ENST00000569240 IL16Q14005 1332 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 KIAA1107Q9UPP5 1409 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 CLSTN1O94985 981 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 BRD3Q15059 726 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 CCDC40Q4G0X9 1142 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 NCBP3Q53F19 620 aaKnown RBP8.23□□□□□ -1.09
CNOT1-216ENST00000569240 PPFIBP2Q8ND30 876 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 MPHOSPH8Q99549 860 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 FHOD3Q2V2M9 1422 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 SSFA2P28290 1259 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 RNF123Q5XPI4 1314 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 CECR2Q9BXF3 1484 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 SKILP12757 684 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 INPP5BP32019 993 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 ZBTB17Q13105 803 aa8.23□□□□□ -1.09
CNOT1-216ENST00000569240 C9orf78Q9NZ63 289 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-216ENST00000569240 BUB1BO60566 1050 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-216ENST00000569240 FBF1Q8TES7 1133 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 CAMSAP2Q08AD1 1489 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 NBPF7P0C2Y1 421 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-216ENST00000569240 SEPT14Q6ZU15 432 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 NPHP3Q7Z494 1330 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 C14orf37Q86TY3 774 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 KDM4AO75164 1064 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 TSNAXIP1Q2TAA8 658 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 CCDC57Q2TAC2 916 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 EFCAB13Q8IY85 973 aa8.22□□□□□ -1.09
CNOT1-216ENST00000569240 ZKSCAN8Q15776 578 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-216ENST00000569240 KLHL10Q6JEL2 608 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 CEP128Q6ZU80 1094 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 ARHGAP45Q92619 1136 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 COG3Q96JB2 828 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 MED4Q9NPJ6 270 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 FKBP15Q5T1M5 1219 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 NFXL1Q6ZNB6 911 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 CCDC155Q8N6L0 562 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 CDCA7LQ96GN5 454 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 CCDC114Q96M63 670 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 BMP15O95972 392 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms