RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 AKAP4Q5JQC9 854 aa27.14■■□□□ 1.94
ABCA3-206ENST00000569062 LINC00116Q8NCU8 138 aa27.14■■□□□ 1.94
ABCA3-206ENST00000569062 HMGB2P26583 209 aaKnown RBP27.13■■□□□ 1.93
ABCA3-206ENST00000569062 ATP6V1AP38606 617 aa27.13■■□□□ 1.93
ABCA3-206ENST00000569062 MTHFSDQ2M296 383 aaKnown RBP27.12■■□□□ 1.93
ABCA3-206ENST00000569062 AMIGO3Q86WK7 504 aa27.12■■□□□ 1.93
ABCA3-206ENST00000569062 NFATC2IPQ8NCF5 419 aa27.12■■□□□ 1.93
ABCA3-206ENST00000569062 ARXQ96QS3 562 aa27.12■■□□□ 1.93
ABCA3-206ENST00000569062 AK7Q96M32 723 aa27.11■■□□□ 1.93
ABCA3-206ENST00000569062 FHDC1Q9C0D6 1143 aaPredicted RBP27.11■■□□□ 1.93
ABCA3-206ENST00000569062 ZNF831Q5JPB2 1677 aa27.11■■□□□ 1.93
ABCA3-206ENST00000569062 SMIM5Q71RC9 77 aa27.1■■□□□ 1.93
ABCA3-206ENST00000569062 CFAP53Q96M91 514 aa27.1■■□□□ 1.93
ABCA3-206ENST00000569062 SLC4A9Q96Q91 983 aa27.1■■□□□ 1.93
ABCA3-206ENST00000569062 RBM42Q9BTD8 480 aaKnown RBP27.1■■□□□ 1.93
ABCA3-206ENST00000569062 LGR6Q9HBX8 967 aa27.1■■□□□ 1.93
ABCA3-206ENST00000569062 COL5A3P25940 1745 aaPredicted RBP27.08■■□□□ 1.93
ABCA3-206ENST00000569062 SYT17Q9BSW7 474 aa27.08■■□□□ 1.93
ABCA3-206ENST00000569062 ADAMTS7Q9UKP4 1686 aa27.08■■□□□ 1.92
ABCA3-206ENST00000569062 POLD1P28340 1107 aa27.07■■□□□ 1.92
ABCA3-206ENST00000569062 FLAD1Q8NFF5 587 aa27.07■■□□□ 1.92
ABCA3-206ENST00000569062 RNMTO43148 476 aaKnown RBP27.06■■□□□ 1.92
ABCA3-206ENST00000569062 PHF14O94880 888 aa27.06■■□□□ 1.92
ABCA3-206ENST00000569062 MSL1Q68DK7 614 aa27.05■■□□□ 1.92
ABCA3-206ENST00000569062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.04■■□□□ 1.92
ABCA3-206ENST00000569062 SLC52A2Q9HAB3 445 aa27.04■■□□□ 1.92
ABCA3-206ENST00000569062 MRC1P22897 1456 aa27.04■■□□□ 1.92
ABCA3-206ENST00000569062 GNPATO15228 680 aa27.03■■□□□ 1.92
ABCA3-206ENST00000569062 PTCD1O75127 700 aaKnown RBP27.03■■□□□ 1.92
ABCA3-206ENST00000569062 TJP1Q07157 1748 aa27.02■■□□□ 1.92
ABCA3-206ENST00000569062 SSFA2P28290 1259 aa27.01■■□□□ 1.91
ABCA3-206ENST00000569062 RSPH6AQ9H0K4 717 aa27.01■■□□□ 1.91
ABCA3-206ENST00000569062 NUDCQ9Y266 331 aa27.01■■□□□ 1.91
ABCA3-206ENST00000569062 MYH14Q7Z406 1995 aaKnown RBP27■■□□□ 1.91
ABCA3-206ENST00000569062 MAP3K5Q99683 1374 aa27■■□□□ 1.91
ABCA3-206ENST00000569062 PRKAR2BP31323 418 aa27■■□□□ 1.91
ABCA3-206ENST00000569062 KLHL34Q8N239 644 aa27■■□□□ 1.91
ABCA3-206ENST00000569062 PHACTR3Q96KR7 559 aa26.99■■□□□ 1.91
ABCA3-206ENST00000569062 CICQ96RK0 1608 aaPredicted RBP26.98■■□□□ 1.91
ABCA3-206ENST00000569062 U2AF1L5P0DN76 240 aaPredicted RBP26.98■■□□□ 1.91
ABCA3-206ENST00000569062 U2AF1Q01081 240 aaKnown RBP eCLIP26.98■■□□□ 1.91
ABCA3-206ENST00000569062 GAS2L2Q8NHY3 880 aa26.98■■□□□ 1.91
ABCA3-206ENST00000569062 DDX10Q13206 875 aaKnown RBP26.97■■□□□ 1.91
ABCA3-206ENST00000569062 SLC39A6Q13433 755 aa26.97■■□□□ 1.91
ABCA3-206ENST00000569062 CNTNAP4Q9C0A0 1308 aa26.96■■□□□ 1.91
ABCA3-206ENST00000569062 DCAF8L1A6NGE4 600 aa26.96■■□□□ 1.91
ABCA3-206ENST00000569062 GNAT3A8MTJ3 354 aa26.96■■□□□ 1.91
ABCA3-206ENST00000569062 SIPA1L3O60292 1781 aaPredicted RBP26.95■■□□□ 1.9
ABCA3-206ENST00000569062 RC3H1Q5TC82 1133 aaKnown RBP26.95■■□□□ 1.9
ABCA3-206ENST00000569062 RTCBQ9Y3I0 505 aaKnown RBP26.95■■□□□ 1.9
ABCA3-206ENST00000569062 UTRNP46939 3433 aa26.95■■□□□ 1.9
ABCA3-206ENST00000569062 IL17REQ8NFR9 667 aa26.94■■□□□ 1.9
ABCA3-206ENST00000569062 KCPQ6ZWJ8 1503 aa26.94■■□□□ 1.9
ABCA3-206ENST00000569062 UBR2Q8IWV8 1755 aa26.93■■□□□ 1.9
ABCA3-206ENST00000569062 FCHSD2O94868 740 aa26.92■■□□□ 1.9
ABCA3-206ENST00000569062 TRAPPC3LQ5T215 181 aa26.92■■□□□ 1.9
ABCA3-206ENST00000569062 C4AP0C0L4 1744 aa26.92■■□□□ 1.9
ABCA3-206ENST00000569062 RPS6KA4O75676 772 aa26.91■■□□□ 1.9
ABCA3-206ENST00000569062 CRKLP46109 303 aaKnown RBP26.91■■□□□ 1.9
ABCA3-206ENST00000569062 NLGN2Q8NFZ4 835 aa26.91■■□□□ 1.9
ABCA3-206ENST00000569062 DNAJC10Q8IXB1 793 aa26.9■■□□□ 1.9
ABCA3-206ENST00000569062 ARHGEF1Q92888 912 aaKnown RBP26.89■■□□□ 1.9
ABCA3-206ENST00000569062 TEFQ10587 303 aa26.88■■□□□ 1.89
ABCA3-206ENST00000569062 CEMIPQ8WUJ3 1361 aa26.87■■□□□ 1.89
ABCA3-206ENST00000569062 ADRA2BP18089 450 aa26.87■■□□□ 1.89
ABCA3-206ENST00000569062 RALBP1Q15311 655 aa26.86■■□□□ 1.89
ABCA3-206ENST00000569062 INTS5Q6P9B9 1019 aaKnown RBP26.86■■□□□ 1.89
ABCA3-206ENST00000569062 GOLGB1Q14789 3259 aaKnown RBP26.86■■□□□ 1.89
ABCA3-206ENST00000569062 RFC4P35249 363 aa26.84■■□□□ 1.89
ABCA3-206ENST00000569062 TTC5Q8N0Z6 440 aa26.84■■□□□ 1.89
ABCA3-206ENST00000569062 DLG5Q8TDM6 1919 aa26.84■■□□□ 1.89
ABCA3-206ENST00000569062 CYP19A1P11511 503 aaPredicted RBP26.83■■□□□ 1.89
ABCA3-206ENST00000569062 YY1P25490 414 aa26.82■■□□□ 1.88
ABCA3-206ENST00000569062 ZNF790Q6PG37 636 aa26.82■■□□□ 1.88
ABCA3-206ENST00000569062 VSIG10Q8N0Z9 540 aa26.82■■□□□ 1.88
ABCA3-206ENST00000569062 CCDC87Q9NVE4 849 aa26.82■■□□□ 1.88
ABCA3-206ENST00000569062 GYS1P13807 737 aa26.81■■□□□ 1.88
ABCA3-206ENST00000569062 GPR162Q16538 588 aa26.81■■□□□ 1.88
ABCA3-206ENST00000569062 MCM10Q7L590 875 aa26.81■■□□□ 1.88
ABCA3-206ENST00000569062 CD2APQ9Y5K6 639 aa26.81■■□□□ 1.88
ABCA3-206ENST00000569062 MMP10P09238 476 aa26.8■■□□□ 1.88
ABCA3-206ENST00000569062 DCTN1Q14203 1278 aa26.8■■□□□ 1.88
ABCA3-206ENST00000569062 PELP1Q8IZL8 1130 aaKnown RBP26.8■■□□□ 1.88
ABCA3-206ENST00000569062 NLGN1Q8N2Q7 840 aa26.8■■□□□ 1.88
ABCA3-206ENST00000569062 ZNF496Q96IT1 587 aaPredicted RBP26.8■■□□□ 1.88
ABCA3-206ENST00000569062 RTF1Q92541 710 aaKnown RBP26.79■■□□□ 1.88
ABCA3-206ENST00000569062 PLEKHF1Q96S99 279 aa26.79■■□□□ 1.88
ABCA3-206ENST00000569062 SRP68Q9UHB9 627 aaKnown RBP26.79■■□□□ 1.88
ABCA3-206ENST00000569062 CHD4Q14839 1912 aa26.78■■□□□ 1.88
ABCA3-206ENST00000569062 BTBD11A6QL63 1104 aa26.78■■□□□ 1.88
ABCA3-206ENST00000569062 KCNQ3O43525 872 aa26.78■■□□□ 1.88
ABCA3-206ENST00000569062 ZBTB1Q9Y2K1 713 aa26.78■■□□□ 1.88
ABCA3-206ENST00000569062 HEG1Q9ULI3 1381 aa26.77■■□□□ 1.88
ABCA3-206ENST00000569062 SOS1Q07889 1333 aaPredicted RBP26.77■■□□□ 1.88
ABCA3-206ENST00000569062 USP42Q9H9J4 1324 aaKnown RBP26.77■■□□□ 1.88
ABCA3-206ENST00000569062 ZEB1P37275 1124 aaPredicted RBP26.77■■□□□ 1.88
ABCA3-206ENST00000569062 MYBBP1AQ9BQG0 1328 aaKnown RBP26.76■■□□□ 1.87
ABCA3-206ENST00000569062 KIF13BQ9NQT8 1826 aa26.75■■□□□ 1.87
ABCA3-206ENST00000569062 HTATSF1O43719 755 aaKnown RBP26.75■■□□□ 1.87
ABCA3-206ENST00000569062 NEFMP07197 916 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms