RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 TMPOP42166 694 aaKnown RBP19.34■□□□□ 0.69
TSC2-222ENST00000568454 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
TSC2-222ENST00000568454 NFE2L2Q16236 605 aa19.34■□□□□ 0.69
TSC2-222ENST00000568454 DHX37Q8IY37 1157 aaKnown RBP19.34■□□□□ 0.69
TSC2-222ENST00000568454 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.69
TSC2-222ENST00000568454 LIMCH1Q9UPQ0 1083 aa19.33■□□□□ 0.69
TSC2-222ENST00000568454 TIGD1Q96MW7 591 aa19.33■□□□□ 0.69
TSC2-222ENST00000568454 SEPT11Q9NVA2 429 aaKnown RBP19.33■□□□□ 0.69
TSC2-222ENST00000568454 BAG4O95429 457 aaKnown RBP19.33■□□□□ 0.68
TSC2-222ENST00000568454 TMEM132AQ24JP5 1023 aa19.33■□□□□ 0.68
TSC2-222ENST00000568454 LRPPRCP42704 1394 aaKnown RBP19.33■□□□□ 0.68
TSC2-222ENST00000568454 ABCC11Q96J66 1382 aa19.33■□□□□ 0.68
TSC2-222ENST00000568454 PRAM1Q96QH2 718 aa19.33■□□□□ 0.68
TSC2-222ENST00000568454 U3KPZ7 1027 aaPredicted RBP19.33■□□□□ 0.68
TSC2-222ENST00000568454 PAFAH1B1P43034 410 aa19.32■□□□□ 0.68
TSC2-222ENST00000568454 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
TSC2-222ENST00000568454 PRPF40BQ6NWY9 871 aaKnown RBP19.32■□□□□ 0.68
TSC2-222ENST00000568454 CCDC91Q7Z6B0 441 aa19.32■□□□□ 0.68
TSC2-222ENST00000568454 ABTB2Q8N961 1025 aa19.32■□□□□ 0.68
TSC2-222ENST00000568454 EXOC6BQ9Y2D4 811 aa19.32■□□□□ 0.68
TSC2-222ENST00000568454 FKBP15Q5T1M5 1219 aa19.32■□□□□ 0.68
TSC2-222ENST00000568454 TRMT1Q9NXH9 659 aaKnown RBP19.32■□□□□ 0.68
TSC2-222ENST00000568454 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
TSC2-222ENST00000568454 FKBP4Q02790 459 aaKnown RBP eCLIP19.31■□□□□ 0.68
TSC2-222ENST00000568454 NUTM1Q86Y26 1132 aa19.31■□□□□ 0.68
TSC2-222ENST00000568454 CEP126Q9P2H0 1117 aa19.31■□□□□ 0.68
TSC2-222ENST00000568454 SNW1Q13573 536 aaKnown RBP19.31■□□□□ 0.68
TSC2-222ENST00000568454 STX1AQ16623 288 aa19.31■□□□□ 0.68
TSC2-222ENST00000568454 LUZP1Q86V48 1076 aa19.31■□□□□ 0.68
TSC2-222ENST00000568454 KRT222Q8N1A0 295 aa19.31■□□□□ 0.68
TSC2-222ENST00000568454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.31■□□□□ 0.68
TSC2-222ENST00000568454 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.31■□□□□ 0.684e-9■■■■■ 33.2
TSC2-222ENST00000568454 TRERF1Q96PN7 1200 aa19.3■□□□□ 0.68
TSC2-222ENST00000568454 USO1O60763 962 aaKnown RBP19.3■□□□□ 0.68
TSC2-222ENST00000568454 SMC1AQ14683 1233 aaKnown RBP19.3■□□□□ 0.68
TSC2-222ENST00000568454 RNF187Q5TA31 235 aaPredicted RBP19.3■□□□□ 0.68
TSC2-222ENST00000568454 WWC2Q6AWC2 1192 aa19.3■□□□□ 0.68
TSC2-222ENST00000568454 TBC1D32Q96NH3 1257 aa19.3■□□□□ 0.68
TSC2-222ENST00000568454 TIAM1Q13009 1591 aa19.3■□□□□ 0.68
TSC2-222ENST00000568454 SSBP05455 408 aaKnown RBP eCLIP19.3■□□□□ 0.68
TSC2-222ENST00000568454 HMGB1P09429 215 aaKnown RBP19.3■□□□□ 0.68
TSC2-222ENST00000568454 TDO2P48775 406 aa19.3■□□□□ 0.68
TSC2-222ENST00000568454 CCDC171Q6TFL3 1326 aa19.3■□□□□ 0.68
TSC2-222ENST00000568454 CKAP2LQ8IYA6 745 aa19.3■□□□□ 0.68
TSC2-222ENST00000568454 CETN2P41208 172 aa19.29■□□□□ 0.68
TSC2-222ENST00000568454 CEP135Q66GS9 1140 aa19.29■□□□□ 0.68
TSC2-222ENST00000568454 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
TSC2-222ENST00000568454 CCDC150Q8NCX0 1101 aa19.29■□□□□ 0.68
TSC2-222ENST00000568454 ATAD2Q6PL18 1390 aa19.29■□□□□ 0.68
TSC2-222ENST00000568454 YEATS4O95619 227 aa19.29■□□□□ 0.68
TSC2-222ENST00000568454 IFFO1Q0D2I5 559 aa19.29■□□□□ 0.68
TSC2-222ENST00000568454 TATP17735 454 aaPredicted RBP19.28■□□□□ 0.68
TSC2-222ENST00000568454 BMP2KLQ5H9B9 411 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 ZNF530Q6P9A1 599 aaPredicted RBP19.28■□□□□ 0.68
TSC2-222ENST00000568454 SSH1Q8WYL5 1049 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 C8orf76Q96K31 380 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 ARHGAP5Q13017 1502 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 RAI14Q9P0K7 980 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 C9orf84Q5VXU9 1444 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 SPDYE4A6NLX3 237 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 UBE2HP62256 183 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 LRSAM1Q6UWE0 723 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 CDK19Q9BWU1 502 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 CABP1Q9NZU7 370 aa19.28■□□□□ 0.68
TSC2-222ENST00000568454 GCOM1H8Y6P7 765 aaPredicted RBP19.27■□□□□ 0.68
TSC2-222ENST00000568454 MYZAPP0CAP1 466 aa19.27■□□□□ 0.68
TSC2-222ENST00000568454 LMAN1P49257 510 aa19.27■□□□□ 0.68
TSC2-222ENST00000568454 GOLGA6L10A0A0M3HER8 536 aa19.27■□□□□ 0.68
TSC2-222ENST00000568454 ZSCAN23Q3MJ62 389 aa19.27■□□□□ 0.68
TSC2-222ENST00000568454 NAA15Q9BXJ9 866 aaKnown RBP19.27■□□□□ 0.68
TSC2-222ENST00000568454 VPS36Q86VN1 386 aa19.27■□□□□ 0.68
TSC2-222ENST00000568454 TMC6Q7Z403 805 aa19.27■□□□□ 0.67
TSC2-222ENST00000568454 SKAP1Q86WV1 359 aa19.27■□□□□ 0.67
TSC2-222ENST00000568454 PPP1R12BO60237 982 aaPredicted RBP19.26■□□□□ 0.67
TSC2-222ENST00000568454 CTR9Q6PD62 1173 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 CCDC113Q9H0I3 377 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 CCDC175P0C221 793 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 ZNF165P49910 485 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 KLHL10Q6JEL2 608 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 ATF3P18847 181 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 FSIP1Q8NA03 581 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 STX6O43752 255 aa19.26■□□□□ 0.67
TSC2-222ENST00000568454 CACNA2D4Q7Z3S7 1137 aa19.25■□□□□ 0.67
TSC2-222ENST00000568454 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
TSC2-222ENST00000568454 FGFR1OPO95684 399 aaKnown RBP19.25■□□□□ 0.67
TSC2-222ENST00000568454 CCDC196A0A1B0GTZ2 297 aa19.25■□□□□ 0.67
TSC2-222ENST00000568454 SMARCA5O60264 1052 aaPredicted RBP19.25■□□□□ 0.67
TSC2-222ENST00000568454 NUP88Q99567 741 aaPredicted RBP19.25■□□□□ 0.67
TSC2-222ENST00000568454 DESP17661 470 aa19.24■□□□□ 0.67
TSC2-222ENST00000568454 TSG101Q99816 390 aa19.24■□□□□ 0.67
TSC2-222ENST00000568454 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
TSC2-222ENST00000568454 TICAM2Q86XR7 235 aa19.24■□□□□ 0.67
TSC2-222ENST00000568454 OSCARQ8IYS5 282 aa19.24■□□□□ 0.67
TSC2-222ENST00000568454 GPATCH11Q8N954 259 aa19.24■□□□□ 0.67
TSC2-222ENST00000568454 MPHOSPH8Q99549 860 aa19.24■□□□□ 0.67
TSC2-222ENST00000568454 PAF1Q8N7H5 531 aa19.23■□□□□ 0.67
TSC2-222ENST00000568454 CNNM3Q8NE01 707 aa19.23■□□□□ 0.67
TSC2-222ENST00000568454 XRCC6P12956 609 aaKnown RBP eCLIP19.23■□□□□ 0.67
TSC2-222ENST00000568454 ALS2CR12Q96Q35 445 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms