RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 ITPK1Q13572 414 aa30.55■■■□□ 2.48
SPG7-217ENST00000568151 LGR6Q9HBX8 967 aa30.55■■■□□ 2.48
SPG7-217ENST00000568151 LINC00116Q8NCU8 138 aa30.54■■■□□ 2.48
SPG7-217ENST00000568151 SLC16A10Q8TF71 515 aa30.54■■■□□ 2.48
SPG7-217ENST00000568151 NUDCQ9Y266 331 aa30.54■■■□□ 2.48
SPG7-217ENST00000568151 ADAMTS7Q9UKP4 1686 aa30.54■■■□□ 2.48
SPG7-217ENST00000568151 ZEB1P37275 1124 aaPredicted RBP30.53■■■□□ 2.48
SPG7-217ENST00000568151 ATP6V1AP38606 617 aa30.53■■■□□ 2.48
SPG7-217ENST00000568151 COL23A1Q86Y22 540 aaPredicted RBP30.53■■■□□ 2.48
SPG7-217ENST00000568151 SLC4A9Q96Q91 983 aa30.53■■■□□ 2.48
SPG7-217ENST00000568151 RSPH6AQ9H0K4 717 aa30.53■■■□□ 2.48
SPG7-217ENST00000568151 COL24A1Q17RW2 1714 aa30.53■■■□□ 2.48
SPG7-217ENST00000568151 ZNF831Q5JPB2 1677 aa30.52■■■□□ 2.48
SPG7-217ENST00000568151 RNMTO43148 476 aaKnown RBP30.52■■■□□ 2.48
SPG7-217ENST00000568151 MRC1P22897 1456 aa30.51■■■□□ 2.48
SPG7-217ENST00000568151 UBR3Q6ZT12 1888 aa30.51■■■□□ 2.47
SPG7-217ENST00000568151 PRKAR2BP31323 418 aa30.5■■■□□ 2.47
SPG7-217ENST00000568151 AMIGO3Q86WK7 504 aa30.5■■■□□ 2.47
SPG7-217ENST00000568151 U2AF1L5P0DN76 240 aaPredicted RBP30.49■■■□□ 2.47
SPG7-217ENST00000568151 U2AF1Q01081 240 aaKnown RBP eCLIP30.49■■■□□ 2.471e-21■■□□□ 12.5
SPG7-217ENST00000568151 PHACTR3Q96KR7 559 aa30.49■■■□□ 2.47
SPG7-217ENST00000568151 AK7Q96M32 723 aa30.49■■■□□ 2.47
SPG7-217ENST00000568151 RBM42Q9BTD8 480 aaKnown RBP30.49■■■□□ 2.47
SPG7-217ENST00000568151 SLC52A2Q9HAB3 445 aa30.49■■■□□ 2.47
SPG7-217ENST00000568151 GAS2L2Q8NHY3 880 aa30.48■■■□□ 2.47
SPG7-217ENST00000568151 MSH5O43196 834 aa30.46■■■□□ 2.47
SPG7-217ENST00000568151 COL5A3P25940 1745 aaPredicted RBP30.45■■■□□ 2.47
SPG7-217ENST00000568151 MAP3K5Q99683 1374 aa30.45■■■□□ 2.47
SPG7-217ENST00000568151 SMIM5Q71RC9 77 aa30.45■■■□□ 2.47
SPG7-217ENST00000568151 FLAD1Q8NFF5 587 aa30.45■■■□□ 2.47
SPG7-217ENST00000568151 RALBP1Q15311 655 aa30.44■■■□□ 2.46
SPG7-217ENST00000568151 PTCD1O75127 700 aaKnown RBP30.43■■■□□ 2.46
SPG7-217ENST00000568151 FCHSD2O94868 740 aa30.43■■■□□ 2.46
SPG7-217ENST00000568151 ARXQ96QS3 562 aa30.43■■■□□ 2.46
SPG7-217ENST00000568151 GNAT3A8MTJ3 354 aa30.42■■■□□ 2.46
SPG7-217ENST00000568151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.41■■■□□ 2.46
SPG7-217ENST00000568151 IL17REQ8NFR9 667 aa30.41■■■□□ 2.46
SPG7-217ENST00000568151 FHDC1Q9C0D6 1143 aaPredicted RBP30.41■■■□□ 2.46
SPG7-217ENST00000568151 TJP1Q07157 1748 aa30.4■■■□□ 2.46
SPG7-217ENST00000568151 GNPATO15228 680 aa30.4■■■□□ 2.46
SPG7-217ENST00000568151 PHF14O94880 888 aa30.4■■■□□ 2.46
SPG7-217ENST00000568151 SSFA2P28290 1259 aa30.4■■■□□ 2.46
SPG7-217ENST00000568151 CICQ96RK0 1608 aaPredicted RBP30.4■■■□□ 2.46
SPG7-217ENST00000568151 POLD1P28340 1107 aa30.39■■■□□ 2.46
SPG7-217ENST00000568151 SLC39A6Q13433 755 aa30.39■■■□□ 2.46
SPG7-217ENST00000568151 MYH14Q7Z406 1995 aaKnown RBP30.39■■■□□ 2.46
SPG7-217ENST00000568151 SIPA1L3O60292 1781 aaPredicted RBP30.37■■■□□ 2.45
SPG7-217ENST00000568151 MSL1Q68DK7 614 aa30.37■■■□□ 2.45
SPG7-217ENST00000568151 CNTNAP4Q9C0A0 1308 aa30.37■■■□□ 2.45
SPG7-217ENST00000568151 RC3H1Q5TC82 1133 aaKnown RBP30.36■■■□□ 2.45
SPG7-217ENST00000568151 SYT17Q9BSW7 474 aa30.36■■■□□ 2.45
SPG7-217ENST00000568151 KCPQ6ZWJ8 1503 aa30.36■■■□□ 2.45
SPG7-217ENST00000568151 CEMIPQ8WUJ3 1361 aa30.35■■■□□ 2.45
SPG7-217ENST00000568151 UBR2Q8IWV8 1755 aa30.34■■■□□ 2.45
SPG7-217ENST00000568151 MYBBP1AQ9BQG0 1328 aaKnown RBP30.32■■■□□ 2.44
SPG7-217ENST00000568151 TEFQ10587 303 aa30.32■■■□□ 2.44
SPG7-217ENST00000568151 RTCBQ9Y3I0 505 aaKnown RBP30.32■■■□□ 2.44
SPG7-217ENST00000568151 RPS6KA4O75676 772 aa30.3■■■□□ 2.44
SPG7-217ENST00000568151 CRKLP46109 303 aaKnown RBP30.3■■■□□ 2.44
SPG7-217ENST00000568151 DNAJC10Q8IXB1 793 aa30.3■■■□□ 2.44
SPG7-217ENST00000568151 PLEKHF1Q96S99 279 aa30.29■■■□□ 2.44
SPG7-217ENST00000568151 TRAPPC3LQ5T215 181 aa30.28■■■□□ 2.44
SPG7-217ENST00000568151 DLG5Q8TDM6 1919 aa30.26■■■□□ 2.44
SPG7-217ENST00000568151 ADRA2BP18089 450 aa30.26■■■□□ 2.43
SPG7-217ENST00000568151 INTS5Q6P9B9 1019 aaKnown RBP30.26■■■□□ 2.43
SPG7-217ENST00000568151 MCM10Q7L590 875 aa30.26■■■□□ 2.43
SPG7-217ENST00000568151 ARHGEF1Q92888 912 aaKnown RBP30.26■■■□□ 2.43
SPG7-217ENST00000568151 C4AP0C0L4 1744 aa30.25■■■□□ 2.43
SPG7-217ENST00000568151 ZNF790Q6PG37 636 aa30.25■■■□□ 2.43
SPG7-217ENST00000568151 TTC5Q8N0Z6 440 aa30.25■■■□□ 2.43
SPG7-217ENST00000568151 VSIG10Q8N0Z9 540 aa30.25■■■□□ 2.43
SPG7-217ENST00000568151 KLHL34Q8N239 644 aa30.25■■■□□ 2.43
SPG7-217ENST00000568151 PRKRIP1Q9H875 184 aaPredicted RBP30.25■■■□□ 2.43
SPG7-217ENST00000568151 CYP19A1P11511 503 aaPredicted RBP30.24■■■□□ 2.43
SPG7-217ENST00000568151 RTF1Q92541 710 aaKnown RBP30.24■■■□□ 2.43
SPG7-217ENST00000568151 HTATSF1O43719 755 aaKnown RBP30.23■■■□□ 2.43
SPG7-217ENST00000568151 DCTN1Q14203 1278 aa30.23■■■□□ 2.43
SPG7-217ENST00000568151 ZNF496Q96IT1 587 aaPredicted RBP30.23■■■□□ 2.43
SPG7-217ENST00000568151 NEFMP07197 916 aa30.22■■■□□ 2.43
SPG7-217ENST00000568151 CCDC87Q9NVE4 849 aa30.22■■■□□ 2.43
SPG7-217ENST00000568151 BTBD11A6QL63 1104 aa30.2■■■□□ 2.43
SPG7-217ENST00000568151 KCNQ3O43525 872 aa30.2■■■□□ 2.43
SPG7-217ENST00000568151 RFC4P35249 363 aa30.2■■■□□ 2.43
SPG7-217ENST00000568151 HEG1Q9ULI3 1381 aa30.19■■■□□ 2.42
SPG7-217ENST00000568151 NFE2L2Q16236 605 aa30.19■■■□□ 2.42
SPG7-217ENST00000568151 NLGN2Q8NFZ4 835 aa30.19■■■□□ 2.42
SPG7-217ENST00000568151 PNNQ9H307 717 aaKnown RBP30.19■■■□□ 2.42
SPG7-217ENST00000568151 DCAF8L1A6NGE4 600 aa30.18■■■□□ 2.42
SPG7-217ENST00000568151 SOS1Q07889 1333 aaPredicted RBP30.17■■■□□ 2.42
SPG7-217ENST00000568151 MAPK8IP3Q9UPT6 1336 aa30.17■■■□□ 2.42
SPG7-217ENST00000568151 ZNF316A6NFI3 1004 aaPredicted RBP30.16■■■□□ 2.42
SPG7-217ENST00000568151 GYS1P13807 737 aa30.16■■■□□ 2.42
SPG7-217ENST00000568151 ZBTB1Q9Y2K1 713 aa30.16■■■□□ 2.42
SPG7-217ENST00000568151 NLGN1Q8N2Q7 840 aa30.15■■■□□ 2.42
SPG7-217ENST00000568151 FMNL2Q96PY5 1086 aa30.15■■■□□ 2.42
SPG7-217ENST00000568151 MMP10P09238 476 aa30.14■■■□□ 2.42
SPG7-217ENST00000568151 SRP68Q9UHB9 627 aaKnown RBP30.14■■■□□ 2.42
SPG7-217ENST00000568151 CD2APQ9Y5K6 639 aa30.14■■■□□ 2.42
SPG7-217ENST00000568151 USP42Q9H9J4 1324 aaKnown RBP30.14■■■□□ 2.42
SPG7-217ENST00000568151 STARD3NLO95772 234 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms