RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 ITPK1Q13572 414 aa25.75■■□□□ 1.71
GTF3C1-207ENST00000567806 PLEKHG2Q9H7P9 1386 aa25.74■■□□□ 1.71
GTF3C1-207ENST00000567806 GNPATO15228 680 aa25.74■■□□□ 1.71
GTF3C1-207ENST00000567806 DCAF5Q96JK2 942 aa25.74■■□□□ 1.71
GTF3C1-207ENST00000567806 KNSTRNQ9Y448 316 aa25.74■■□□□ 1.71
GTF3C1-207ENST00000567806 C1QTNF8P60827 252 aa25.73■■□□□ 1.71
GTF3C1-207ENST00000567806 AMOTQ4VCS5 1084 aa25.73■■□□□ 1.71
GTF3C1-207ENST00000567806 RBM42Q9BTD8 480 aaKnown RBP25.72■■□□□ 1.71
GTF3C1-207ENST00000567806 ZNF530Q6P9A1 599 aaPredicted RBP25.71■■□□□ 1.71
GTF3C1-207ENST00000567806 GOLGB1Q14789 3259 aaKnown RBP25.69■■□□□ 1.7
GTF3C1-207ENST00000567806 CABP4P57796 275 aa25.69■■□□□ 1.7
GTF3C1-207ENST00000567806 GIGYF1O75420 1035 aaPredicted RBP25.68■■□□□ 1.7
GTF3C1-207ENST00000567806 MTHFSP49914 203 aa25.68■■□□□ 1.7
GTF3C1-207ENST00000567806 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
GTF3C1-207ENST00000567806 TRAPPC3LQ5T215 181 aa25.68■■□□□ 1.7
GTF3C1-207ENST00000567806 RTCBQ9Y3I0 505 aaKnown RBP25.68■■□□□ 1.7
GTF3C1-207ENST00000567806 UBR3Q6ZT12 1888 aa25.66■■□□□ 1.7
GTF3C1-207ENST00000567806 SENP3-EIF4A1A0A087X0R7 540 aa25.66■■□□□ 1.7
GTF3C1-207ENST00000567806 RC3H1Q5TC82 1133 aaKnown RBP25.65■■□□□ 1.7
GTF3C1-207ENST00000567806 SULT6B1Q6IMI4 303 aa25.65■■□□□ 1.7
GTF3C1-207ENST00000567806 AEBP1Q8IUX7 1158 aa25.65■■□□□ 1.7
GTF3C1-207ENST00000567806 SLC4A9Q96Q91 983 aa25.64■■□□□ 1.7
GTF3C1-207ENST00000567806 MMP10P09238 476 aa25.63■■□□□ 1.69
GTF3C1-207ENST00000567806 NLGN1Q8N2Q7 840 aa25.63■■□□□ 1.69
GTF3C1-207ENST00000567806 WWC3Q9ULE0 1092 aa25.62■■□□□ 1.69
GTF3C1-207ENST00000567806 KDRP35968 1356 aa25.61■■□□□ 1.69
GTF3C1-207ENST00000567806 ADRA2BP18089 450 aa25.61■■□□□ 1.69
GTF3C1-207ENST00000567806 IL13P35225 146 aa25.61■■□□□ 1.69
GTF3C1-207ENST00000567806 NFATC2IPQ8NCF5 419 aa25.61■■□□□ 1.69
GTF3C1-207ENST00000567806 RFC4P35249 363 aa25.6■■□□□ 1.69
GTF3C1-207ENST00000567806 ARHGEF1Q92888 912 aaKnown RBP25.6■■□□□ 1.69
GTF3C1-207ENST00000567806 PTCD1O75127 700 aaKnown RBP25.59■■□□□ 1.69
GTF3C1-207ENST00000567806 RPS6KA4O75676 772 aa25.59■■□□□ 1.69
GTF3C1-207ENST00000567806 KDM6AO15550 1401 aaPredicted RBP25.59■■□□□ 1.69
GTF3C1-207ENST00000567806 CNTNAP4Q9C0A0 1308 aa25.59■■□□□ 1.69
GTF3C1-207ENST00000567806 AMER1Q5JTC6 1135 aaPredicted RBP25.58■■□□□ 1.69
GTF3C1-207ENST00000567806 TGFB2P61812 414 aa25.55■■□□□ 1.68
GTF3C1-207ENST00000567806 KIF7Q2M1P5 1343 aa25.55■■□□□ 1.68
GTF3C1-207ENST00000567806 ATP10DQ9P241 1426 aa25.54■■□□□ 1.68
GTF3C1-207ENST00000567806 AKAP4Q5JQC9 854 aa25.54■■□□□ 1.68
GTF3C1-207ENST00000567806 GPBP1L1Q9HC44 474 aaPredicted RBP25.54■■□□□ 1.68
GTF3C1-207ENST00000567806 GYS1P13807 737 aa25.53■■□□□ 1.68
GTF3C1-207ENST00000567806 CCDC87Q9NVE4 849 aa25.53■■□□□ 1.68
GTF3C1-207ENST00000567806 PARP3Q9Y6F1 533 aa25.53■■□□□ 1.68
GTF3C1-207ENST00000567806 CRKLP46109 303 aaKnown RBP25.52■■□□□ 1.68
GTF3C1-207ENST00000567806 ZNF831Q5JPB2 1677 aa25.52■■□□□ 1.68
GTF3C1-207ENST00000567806 A0A0G2JLW4 131 aa25.5■■□□□ 1.67
GTF3C1-207ENST00000567806 ZNF526Q8TF50 670 aaPredicted RBP25.5■■□□□ 1.67
GTF3C1-207ENST00000567806 HMOX1P09601 288 aa25.49■■□□□ 1.67
GTF3C1-207ENST00000567806 CC2D1BQ5T0F9 858 aaKnown RBP25.49■■□□□ 1.67
GTF3C1-207ENST00000567806 SLC52A2Q9HAB3 445 aa25.48■■□□□ 1.67
GTF3C1-207ENST00000567806 LGR6Q9HBX8 967 aa25.48■■□□□ 1.67
GTF3C1-207ENST00000567806 BCS1LQ9Y276 419 aa25.48■■□□□ 1.67
GTF3C1-207ENST00000567806 PER1O15534 1290 aaPredicted RBP25.47■■□□□ 1.67
GTF3C1-207ENST00000567806 DIAPH1O60610 1272 aaKnown RBP25.47■■□□□ 1.67
GTF3C1-207ENST00000567806 RNMTO43148 476 aaKnown RBP25.46■■□□□ 1.67
GTF3C1-207ENST00000567806 ADCY9O60503 1353 aa25.45■■□□□ 1.67
GTF3C1-207ENST00000567806 CICQ96RK0 1608 aaPredicted RBP25.45■■□□□ 1.67
GTF3C1-207ENST00000567806 DPEP1P16444 411 aa25.45■■□□□ 1.66
GTF3C1-207ENST00000567806 SRP68Q9UHB9 627 aaKnown RBP25.45■■□□□ 1.66
GTF3C1-207ENST00000567806 PXDNLA1KZ92 1463 aa25.45■■□□□ 1.66
GTF3C1-207ENST00000567806 COL5A3P25940 1745 aaPredicted RBP25.44■■□□□ 1.66
GTF3C1-207ENST00000567806 INTS5Q6P9B9 1019 aaKnown RBP25.44■■□□□ 1.66
GTF3C1-207ENST00000567806 FCHSD2O94868 740 aa25.43■■□□□ 1.66
GTF3C1-207ENST00000567806 MTHFSDQ2M296 383 aaKnown RBP25.43■■□□□ 1.66
GTF3C1-207ENST00000567806 ARHGAP27Q6ZUM4 889 aa25.43■■□□□ 1.66
GTF3C1-207ENST00000567806 DNAJC10Q8IXB1 793 aa25.43■■□□□ 1.66
GTF3C1-207ENST00000567806 C10orf71Q711Q0 1435 aa25.43■■□□□ 1.66
GTF3C1-207ENST00000567806 USP42Q9H9J4 1324 aaKnown RBP25.42■■□□□ 1.66
GTF3C1-207ENST00000567806 ZPR1O75312 459 aa25.42■■□□□ 1.66
GTF3C1-207ENST00000567806 SLC39A6Q13433 755 aa25.42■■□□□ 1.66
GTF3C1-207ENST00000567806 CNGB1Q14028 1251 aaPredicted RBP25.42■■□□□ 1.66
GTF3C1-207ENST00000567806 FKBP8Q14318 412 aa25.42■■□□□ 1.66
GTF3C1-207ENST00000567806 MYH14Q7Z406 1995 aaKnown RBP25.41■■□□□ 1.66
GTF3C1-207ENST00000567806 C4AP0C0L4 1744 aa25.39■■□□□ 1.65
GTF3C1-207ENST00000567806 SCN11AQ9UI33 1791 aa25.39■■□□□ 1.65
GTF3C1-207ENST00000567806 KIF13BQ9NQT8 1826 aa25.38■■□□□ 1.65
GTF3C1-207ENST00000567806 CYP19A1P11511 503 aaPredicted RBP25.38■■□□□ 1.65
GTF3C1-207ENST00000567806 PIM2Q9P1W9 311 aa25.38■■□□□ 1.65
GTF3C1-207ENST00000567806 U2SURPO15042 1029 aaKnown RBP25.37■■□□□ 1.65
GTF3C1-207ENST00000567806 DDR1Q08345 913 aa25.37■■□□□ 1.65
GTF3C1-207ENST00000567806 USPL1Q5W0Q7 1092 aa25.37■■□□□ 1.65
GTF3C1-207ENST00000567806 N4BP2Q86UW6 1770 aaPredicted RBP25.36■■□□□ 1.65
GTF3C1-207ENST00000567806 KCNA3P22001 575 aa25.36■■□□□ 1.65
GTF3C1-207ENST00000567806 TM4SF1P30408 202 aa25.36■■□□□ 1.65
GTF3C1-207ENST00000567806 VSIG10Q8N0Z9 540 aa25.35■■□□□ 1.65
GTF3C1-207ENST00000567806 SOS1Q07889 1333 aaPredicted RBP25.35■■□□□ 1.65
GTF3C1-207ENST00000567806 DALRD3Q5D0E6 543 aaKnown RBP25.34■■□□□ 1.65
GTF3C1-207ENST00000567806 TJP1Q07157 1748 aa25.34■■□□□ 1.65
GTF3C1-207ENST00000567806 NPC1L1Q9UHC9 1359 aa25.33■■□□□ 1.65
GTF3C1-207ENST00000567806 POLRMTO00411 1230 aaKnown RBP25.33■■□□□ 1.65
GTF3C1-207ENST00000567806 TTC5Q8N0Z6 440 aa25.33■■□□□ 1.65
GTF3C1-207ENST00000567806 NARFQ9UHQ1 456 aa25.33■■□□□ 1.65
GTF3C1-207ENST00000567806 KIF3CO14782 793 aa25.32■■□□□ 1.64
GTF3C1-207ENST00000567806 HSPA6P17066 643 aa25.32■■□□□ 1.64
GTF3C1-207ENST00000567806 KIAA1551Q9HCM1 1747 aa25.32■■□□□ 1.64
GTF3C1-207ENST00000567806 STARD3NLO95772 234 aa25.31■■□□□ 1.64
GTF3C1-207ENST00000567806 TEFQ10587 303 aa25.31■■□□□ 1.64
GTF3C1-207ENST00000567806 GAS2L2Q8NHY3 880 aa25.31■■□□□ 1.64
GTF3C1-207ENST00000567806 ZBTB1Q9Y2K1 713 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms