RNA–Protein interactions for RNA: ENST00000567232.1

TNRC6A-212, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-212ENST00000567232 AK7Q96M32 723 aa12.5□□□□□ -0.41
TNRC6A-212ENST00000567232 NSD2O96028 1365 aa12.5□□□□□ -0.41
TNRC6A-212ENST00000567232 ECE1P42892 770 aa12.49□□□□□ -0.41
TNRC6A-212ENST00000567232 BRCA1P38398 1863 aaKnown RBP12.48□□□□□ -0.41
TNRC6A-212ENST00000567232 ITSN1Q15811 1721 aa12.48□□□□□ -0.41
TNRC6A-212ENST00000567232 THSD7BQ9C0I4 1608 aa12.48□□□□□ -0.41
TNRC6A-212ENST00000567232 EIF3AQ14152 1382 aaKnown RBP12.48□□□□□ -0.41
TNRC6A-212ENST00000567232 ACEP12821 1306 aa12.48□□□□□ -0.41
TNRC6A-212ENST00000567232 IL2RBP14784 551 aa12.48□□□□□ -0.41
TNRC6A-212ENST00000567232 NUDT16Q96DE0 195 aaKnown RBP12.47□□□□□ -0.41
TNRC6A-212ENST00000567232 CCDC87Q9NVE4 849 aa12.47□□□□□ -0.41
TNRC6A-212ENST00000567232 USP47Q96K76 1375 aa12.46□□□□□ -0.41
TNRC6A-212ENST00000567232 PRDM6Q9NQX0 595 aa12.46□□□□□ -0.41
TNRC6A-212ENST00000567232 UNC80Q8N2C7 3258 aa12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 ANKRD36BQ8N2N9 1353 aa12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 DDNO94850 711 aaPredicted RBP12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 CHRNA5P30532 468 aa12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 MAP2K2P36507 400 aa12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 APLP2Q06481 763 aa12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 EAPPQ56P03 285 aaPredicted RBP12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 CLEC11AQ9Y240 323 aa12.45□□□□□ -0.42
TNRC6A-212ENST00000567232 COL9A1P20849 921 aa12.44□□□□□ -0.42
TNRC6A-212ENST00000567232 DSG3P32926 999 aa12.44□□□□□ -0.42
TNRC6A-212ENST00000567232 RAPGEFL1Q9UHV5 662 aa12.44□□□□□ -0.42
TNRC6A-212ENST00000567232 C5P01031 1676 aa12.44□□□□□ -0.42
TNRC6A-212ENST00000567232 NLRP6P59044 892 aa12.43□□□□□ -0.42
TNRC6A-212ENST00000567232 RGL3Q3MIN7 710 aa12.43□□□□□ -0.42
TNRC6A-212ENST00000567232 MAP1SQ66K74 1059 aaPredicted RBP12.43□□□□□ -0.42
TNRC6A-212ENST00000567232 NLRP2Q9NX02 1062 aa12.43□□□□□ -0.42
TNRC6A-212ENST00000567232 TOGARAM1Q9Y4F4 1720 aa12.42□□□□□ -0.42
TNRC6A-212ENST00000567232 SAMD1Q6SPF0 538 aaPredicted RBP12.42□□□□□ -0.42
TNRC6A-212ENST00000567232 CNTROBQ8N137 903 aa12.42□□□□□ -0.42
TNRC6A-212ENST00000567232 TAF1DQ9H5J8 278 aaPredicted RBP12.42□□□□□ -0.42
TNRC6A-212ENST00000567232 VCANP13611 3396 aa12.42□□□□□ -0.42
TNRC6A-212ENST00000567232 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
TNRC6A-212ENST00000567232 SOX12O15370 315 aa12.41□□□□□ -0.42
TNRC6A-212ENST00000567232 SSFA2P28290 1259 aa12.41□□□□□ -0.42
TNRC6A-212ENST00000567232 FMR1Q06787 632 aaKnown RBP eCLIP12.41□□□□□ -0.42
TNRC6A-212ENST00000567232 FAM50AQ14320 339 aaKnown RBP12.41□□□□□ -0.42
TNRC6A-212ENST00000567232 CIAPIN1Q6FI81 312 aa12.41□□□□□ -0.42
TNRC6A-212ENST00000567232 ARHGEF25Q86VW2 580 aa12.41□□□□□ -0.42
TNRC6A-212ENST00000567232 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.42
TNRC6A-212ENST00000567232 CPSF1Q10570 1443 aaKnown RBP12.4□□□□□ -0.42
TNRC6A-212ENST00000567232 MYCNP04198 464 aaPredicted RBP12.4□□□□□ -0.42
TNRC6A-212ENST00000567232 CFAP70Q5T0N1 1121 aa12.4□□□□□ -0.42
TNRC6A-212ENST00000567232 RGPD5Q99666 1765 aa12.4□□□□□ -0.42
TNRC6A-212ENST00000567232 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
TNRC6A-212ENST00000567232 BRPF1P55201 1214 aaPredicted RBP12.39□□□□□ -0.43
TNRC6A-212ENST00000567232 C14orf93Q9H972 538 aaKnown RBP12.39□□□□□ -0.43
TNRC6A-212ENST00000567232 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
TNRC6A-212ENST00000567232 CEP290O15078 2479 aa12.38□□□□□ -0.43
TNRC6A-212ENST00000567232 NFKBIEO00221 500 aa12.38□□□□□ -0.43
TNRC6A-212ENST00000567232 FOXD4L1Q9NU39 408 aa12.38□□□□□ -0.43
TNRC6A-212ENST00000567232 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 RANBP2P49792 3224 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 IQCA1LA6NCM1 817 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 PLA2G5P39877 138 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 TMF1P82094 1093 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 ERFEQ4G0M1 354 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 CTU1Q7Z7A3 348 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 PARP3Q9Y6F1 533 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 BRCA2P51587 3418 aa12.37□□□□□ -0.43
TNRC6A-212ENST00000567232 UBR3Q6ZT12 1888 aa12.36□□□□□ -0.43
TNRC6A-212ENST00000567232 NBPF1Q3BBV0 1214 aa12.36□□□□□ -0.43
TNRC6A-212ENST00000567232 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
TNRC6A-212ENST00000567232 SNX27Q96L92 541 aa12.36□□□□□ -0.43
TNRC6A-212ENST00000567232 SLIT3O75094 1523 aa12.36□□□□□ -0.43
TNRC6A-212ENST00000567232 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
TNRC6A-212ENST00000567232 DOT1LQ8TEK3 1739 aa12.35□□□□□ -0.43
TNRC6A-212ENST00000567232 ZIC5Q96T25 663 aa12.35□□□□□ -0.43
TNRC6A-212ENST00000567232 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
TNRC6A-212ENST00000567232 PALLDQ8WX93 1383 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 PLEKHG3A1L390 1219 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 GNPATO15228 680 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 HMGB2P26583 209 aaKnown RBP12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 OTUD5Q96G74 571 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 TLL2Q9Y6L7 1015 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 TAF1LQ8IZX4 1826 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 CCDC88AQ3V6T2 1871 aa12.34□□□□□ -0.43
TNRC6A-212ENST00000567232 CST9Q5W186 159 aa12.33□□□□□ -0.44
TNRC6A-212ENST00000567232 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
TNRC6A-212ENST00000567232 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
TNRC6A-212ENST00000567232 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
TNRC6A-212ENST00000567232 CDK19Q9BWU1 502 aa12.31□□□□□ -0.44
TNRC6A-212ENST00000567232 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
TNRC6A-212ENST00000567232 L3MBTL3Q96JM7 780 aaPredicted RBP12.3□□□□□ -0.44
TNRC6A-212ENST00000567232 EPHX2P34913 555 aa12.29□□□□□ -0.44
TNRC6A-212ENST00000567232 CCDC24Q8N4L8 307 aa12.29□□□□□ -0.44
TNRC6A-212ENST00000567232 POTEFA5A3E0 1075 aa12.28□□□□□ -0.44
TNRC6A-212ENST00000567232 TRAF5O00463 557 aa12.28□□□□□ -0.44
TNRC6A-212ENST00000567232 GYS1P13807 737 aa12.28□□□□□ -0.44
TNRC6A-212ENST00000567232 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
TNRC6A-212ENST00000567232 HACL1Q9UJ83 578 aa12.28□□□□□ -0.44
TNRC6A-212ENST00000567232 H0YGN5 161 aa12.27□□□□□ -0.45
TNRC6A-212ENST00000567232 TRAPPC3LQ5T215 181 aa12.27□□□□□ -0.45
TNRC6A-212ENST00000567232 MPRIPQ6WCQ1 1025 aa12.27□□□□□ -0.45
TNRC6A-212ENST00000567232 SAPCD2Q86UD0 394 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms