RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 CAVIN1Q6NZI2 390 aaKnown RBP8.02□□□□□ -1.13
GINS3-206ENST00000567143 MCM10Q7L590 875 aa8.02□□□□□ -1.13
GINS3-206ENST00000567143 AEBP1Q8IUX7 1158 aa8.02□□□□□ -1.13
GINS3-206ENST00000567143 DDX11L8A8MPP1 907 aa8.02□□□□□ -1.13
GINS3-206ENST00000567143 GBP4Q96PP9 640 aa8.02□□□□□ -1.13
GINS3-206ENST00000567143 POLKQ9UBT6 870 aa8.02□□□□□ -1.13
GINS3-206ENST00000567143 MRE11P49959 708 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 BCL9LQ86UU0 1499 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 ESPNB1AK53 854 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 ZBTB7BO15156 539 aaPredicted RBP8.01□□□□□ -1.13
GINS3-206ENST00000567143 VAMP4O75379 141 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 RNF214Q8ND24 703 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 RBM27Q9P2N5 1060 aaKnown RBP8.01□□□□□ -1.13
GINS3-206ENST00000567143 PARP4Q9UKK3 1724 aaKnown RBP8.01□□□□□ -1.13
GINS3-206ENST00000567143 ACEP12821 1306 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 FSD2A1L4K1 749 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 F6X3S4 739 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 KRT28Q7Z3Y7 464 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 VSIG10Q8N0Z9 540 aa8.01□□□□□ -1.13
GINS3-206ENST00000567143 ZGPATQ8N5A5 531 aaKnown RBP8.01□□□□□ -1.13
GINS3-206ENST00000567143 AATKQ6ZMQ8 1374 aa8□□□□□ -1.13
GINS3-206ENST00000567143 K7ELQ4 463 aaPredicted RBP8□□□□□ -1.13
GINS3-206ENST00000567143 KIF2CQ99661 725 aa8□□□□□ -1.13
GINS3-206ENST00000567143 BCL9O00512 1426 aa8□□□□□ -1.13
GINS3-206ENST00000567143 GSPT1P15170 499 aaKnown RBP8□□□□□ -1.13
GINS3-206ENST00000567143 RTL1A6NKG5 1358 aa8□□□□□ -1.13
GINS3-206ENST00000567143 ESCO1Q5FWF5 840 aa7.99□□□□□ -1.13
GINS3-206ENST00000567143 ONECUT3O60422 494 aaPredicted RBP7.99□□□□□ -1.13
GINS3-206ENST00000567143 PRPF40AO75400 957 aaKnown RBP7.99□□□□□ -1.13
GINS3-206ENST00000567143 RBM10P98175 930 aaKnown RBP7.99□□□□□ -1.13
GINS3-206ENST00000567143 SULT6B1Q6IMI4 303 aa7.99□□□□□ -1.13
GINS3-206ENST00000567143 MRPL50Q8N5N7 158 aaKnown RBP7.99□□□□□ -1.13
GINS3-206ENST00000567143 LARP6Q9BRS8 491 aaKnown RBP7.99□□□□□ -1.13
GINS3-206ENST00000567143 GOLGA6L22H0YM25 854 aa7.99□□□□□ -1.13
GINS3-206ENST00000567143 NASPP49321 788 aaPredicted RBP7.99□□□□□ -1.13
GINS3-206ENST00000567143 AAMPQ13685 434 aa7.99□□□□□ -1.13
GINS3-206ENST00000567143 BMP2KLQ5H9B9 411 aa7.99□□□□□ -1.13
GINS3-206ENST00000567143 RBM33Q96EV2 1170 aaKnown RBP7.99□□□□□ -1.13
GINS3-206ENST00000567143 GLI3P10071 1580 aa7.99□□□□□ -1.13
GINS3-206ENST00000567143 CICQ96RK0 1608 aaPredicted RBP7.98□□□□□ -1.13
GINS3-206ENST00000567143 LTN1O94822 1766 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 HSP90AA2PQ14568 343 aaPredicted RBP7.98□□□□□ -1.13
GINS3-206ENST00000567143 NFE2L2Q16236 605 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 C14orf37Q86TY3 774 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 PEAK1Q9H792 1746 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 FCHSD2O94868 740 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 RBM25P49756 843 aaKnown RBP7.98□□□□□ -1.13
GINS3-206ENST00000567143 ANP32BQ92688 251 aaKnown RBP7.98□□□□□ -1.13
GINS3-206ENST00000567143 MEIS3Q99687 375 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 GDPD2Q9HCC8 539 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 EXOC6BQ9Y2D4 811 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 TTC21BQ7Z4L5 1316 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 RGPD1P0DJD0 1748 aa7.98□□□□□ -1.13
GINS3-206ENST00000567143 FOXO3O43524 673 aa7.97□□□□□ -1.13
GINS3-206ENST00000567143 CDC45O75419 566 aa7.97□□□□□ -1.13
GINS3-206ENST00000567143 RAB3GAP1Q15042 981 aa7.97□□□□□ -1.13
GINS3-206ENST00000567143 NUTM2GQ5VZR2 741 aa7.97□□□□□ -1.13
GINS3-206ENST00000567143 BAG4O95429 457 aaKnown RBP7.97□□□□□ -1.13
GINS3-206ENST00000567143 RGS17Q9UGC6 210 aaPredicted RBP7.97□□□□□ -1.13
GINS3-206ENST00000567143 MAP4K4O95819 1239 aaPredicted RBP7.97□□□□□ -1.13
GINS3-206ENST00000567143 GNAI1P63096 354 aa7.97□□□□□ -1.13
GINS3-206ENST00000567143 PLEKHM2Q8IWE5 1019 aa7.97□□□□□ -1.13
GINS3-206ENST00000567143 RILPL2Q969X0 211 aa7.97□□□□□ -1.13
GINS3-206ENST00000567143 ZNF831Q5JPB2 1677 aa7.96□□□□□ -1.13
GINS3-206ENST00000567143 SLC4A2P04920 1241 aa7.96□□□□□ -1.13
GINS3-206ENST00000567143 CLCN1P35523 988 aa7.96□□□□□ -1.13
GINS3-206ENST00000567143 PIP4K2BP78356 416 aa7.96□□□□□ -1.13
GINS3-206ENST00000567143 CALD1Q05682 793 aaKnown RBP7.96□□□□□ -1.13
GINS3-206ENST00000567143 UBE2Q2Q8WVN8 375 aa7.96□□□□□ -1.13
GINS3-206ENST00000567143 LTV1Q96GA3 475 aaPredicted RBP7.96□□□□□ -1.13
GINS3-206ENST00000567143 UPF3BQ9BZI7 483 aaKnown RBP7.96□□□□□ -1.13
GINS3-206ENST00000567143 TRIM6-TRIM34B2RNG4 842 aa7.96□□□□□ -1.14
GINS3-206ENST00000567143 CT47B1P0C2W7 299 aaPredicted RBP7.96□□□□□ -1.14
GINS3-206ENST00000567143 SDSP20132 328 aa7.96□□□□□ -1.14
GINS3-206ENST00000567143 PLCB2Q00722 1185 aa7.96□□□□□ -1.14
GINS3-206ENST00000567143 GCC1Q96CN9 775 aa7.96□□□□□ -1.14
GINS3-206ENST00000567143 COG3Q96JB2 828 aa7.96□□□□□ -1.14
GINS3-206ENST00000567143 AK9Q5TCS8 1911 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 DISP2A7MBM2 1401 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 NEK4P51957 841 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 XPCQ01831 940 aaPredicted RBP7.95□□□□□ -1.14
GINS3-206ENST00000567143 ALDH1L2Q3SY69 923 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 ZNF772Q68DY9 489 aaPredicted RBP7.95□□□□□ -1.14
GINS3-206ENST00000567143 G2E3Q7L622 706 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 SYCE3A1L190 88 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 HSP90AB2PQ58FF8 381 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 KCNH5Q8NCM2 988 aa7.95□□□□□ -1.14
GINS3-206ENST00000567143 NSFL1CQ9UNZ2 370 aaKnown RBP7.95□□□□□ -1.14
GINS3-206ENST00000567143 COL5A2P05997 1499 aaPredicted RBP7.95□□□□□ -1.14
GINS3-206ENST00000567143 MSNP26038 577 aaKnown RBP7.94□□□□□ -1.14
GINS3-206ENST00000567143 PRIM1P49642 420 aaKnown RBP7.94□□□□□ -1.14
GINS3-206ENST00000567143 KIAA1211Q6ZU35 1233 aa7.94□□□□□ -1.14
GINS3-206ENST00000567143 ANO2Q9NQ90 1003 aa7.94□□□□□ -1.14
GINS3-206ENST00000567143 FAM13BQ9NYF5 915 aa7.94□□□□□ -1.14
GINS3-206ENST00000567143 QSER1Q2KHR3 1735 aa7.94□□□□□ -1.14
GINS3-206ENST00000567143 PKD1L3Q7Z443 1732 aa7.94□□□□□ -1.14
GINS3-206ENST00000567143 DDX54Q8TDD1 881 aaKnown RBP7.94□□□□□ -1.14
GINS3-206ENST00000567143 SNX21Q969T3 373 aa7.94□□□□□ -1.14
GINS3-206ENST00000567143 IL1RAPL2Q9NP60 686 aa7.94□□□□□ -1.14
GINS3-206ENST00000567143 R3HCC1Q9Y3T6 440 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms