RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 KRT27Q7Z3Y8 459 aa20.27■□□□□ 0.83
SNHG20-204ENST00000566583 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
SNHG20-204ENST00000566583 CDCA7LQ96GN5 454 aa20.26■□□□□ 0.83
SNHG20-204ENST00000566583 IFT57Q9NWB7 429 aa20.26■□□□□ 0.83
SNHG20-204ENST00000566583 CHL1O00533 1208 aa20.25■□□□□ 0.83
SNHG20-204ENST00000566583 TAF7Q15545 349 aaPredicted RBP20.25■□□□□ 0.83
SNHG20-204ENST00000566583 CFAP44Q96MT7 982 aa20.25■□□□□ 0.83
SNHG20-204ENST00000566583 FAM182BQ5T319 152 aa20.24■□□□□ 0.83
SNHG20-204ENST00000566583 BABAM1Q9NWV8 329 aa20.24■□□□□ 0.83
SNHG20-204ENST00000566583 TEFQ10587 303 aa20.23■□□□□ 0.83
SNHG20-204ENST00000566583 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
SNHG20-204ENST00000566583 E9PSI1 815 aa20.22■□□□□ 0.83
SNHG20-204ENST00000566583 GNAI1P63096 354 aa20.22■□□□□ 0.83
SNHG20-204ENST00000566583 TNS1Q9HBL0 1735 aaKnown RBP20.21■□□□□ 0.83
SNHG20-204ENST00000566583 CABP4P57796 275 aa20.21■□□□□ 0.83
SNHG20-204ENST00000566583 DUSP27Q5VZP5 1158 aa20.21■□□□□ 0.83
SNHG20-204ENST00000566583 LY75O60449 1722 aa20.21■□□□□ 0.83
SNHG20-204ENST00000566583 KCPQ6ZWJ8 1503 aa20.2■□□□□ 0.82
SNHG20-204ENST00000566583 PRIM1P49642 420 aaKnown RBP20.2■□□□□ 0.82
SNHG20-204ENST00000566583 FAM196AQ6ZSG2 479 aa20.2■□□□□ 0.82
SNHG20-204ENST00000566583 PIGBQ92521 554 aa20.2■□□□□ 0.82
SNHG20-204ENST00000566583 MBIPQ9NS73 344 aa20.2■□□□□ 0.82
SNHG20-204ENST00000566583 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
SNHG20-204ENST00000566583 FANCIQ9NVI1 1328 aa20.2■□□□□ 0.82
SNHG20-204ENST00000566583 ZNF831Q5JPB2 1677 aa20.19■□□□□ 0.82
SNHG20-204ENST00000566583 KCNQ2O43526 872 aa20.19■□□□□ 0.82
SNHG20-204ENST00000566583 ACSBG1Q96GR2 724 aa20.19■□□□□ 0.82
SNHG20-204ENST00000566583 C5P01031 1676 aa20.19■□□□□ 0.82
SNHG20-204ENST00000566583 HEG1Q9ULI3 1381 aa20.18■□□□□ 0.82
SNHG20-204ENST00000566583 PTF1AQ7RTS3 328 aa20.18■□□□□ 0.82
SNHG20-204ENST00000566583 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
SNHG20-204ENST00000566583 TMOD3Q9NYL9 352 aa20.18■□□□□ 0.82
SNHG20-204ENST00000566583 MIS18AQ9NYP9 233 aa20.18■□□□□ 0.82
SNHG20-204ENST00000566583 KCNQ3O43525 872 aa20.17■□□□□ 0.82
SNHG20-204ENST00000566583 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
SNHG20-204ENST00000566583 BTBD11A6QL63 1104 aa20.16■□□□□ 0.82
SNHG20-204ENST00000566583 TSPYL4Q9UJ04 414 aa20.16■□□□□ 0.82
SNHG20-204ENST00000566583 LAS1LQ9Y4W2 734 aaKnown RBP20.16■□□□□ 0.82
SNHG20-204ENST00000566583 LAMB4A4D0S4 1761 aa20.16■□□□□ 0.82
SNHG20-204ENST00000566583 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
SNHG20-204ENST00000566583 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
SNHG20-204ENST00000566583 ATG3Q9NT62 314 aa20.15■□□□□ 0.82
SNHG20-204ENST00000566583 TJP1Q07157 1748 aa20.15■□□□□ 0.82
SNHG20-204ENST00000566583 CACNA1FO60840 1977 aa20.15■□□□□ 0.82
SNHG20-204ENST00000566583 RGPD3A6NKT7 1758 aaPredicted RBP20.14■□□□□ 0.81
SNHG20-204ENST00000566583 RGPD4Q7Z3J3 1758 aa20.14■□□□□ 0.81
SNHG20-204ENST00000566583 EIF4A1P60842 406 aaKnown RBP20.14■□□□□ 0.81
SNHG20-204ENST00000566583 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
SNHG20-204ENST00000566583 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
SNHG20-204ENST00000566583 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
SNHG20-204ENST00000566583 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
SNHG20-204ENST00000566583 COL5A3P25940 1745 aaPredicted RBP20.11■□□□□ 0.81
SNHG20-204ENST00000566583 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
SNHG20-204ENST00000566583 KRT24Q2M2I5 525 aa20.1■□□□□ 0.81
SNHG20-204ENST00000566583 C8orf58Q8NAV2 365 aa20.1■□□□□ 0.81
SNHG20-204ENST00000566583 ZNF496Q96IT1 587 aaPredicted RBP20.1■□□□□ 0.81
SNHG20-204ENST00000566583 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
SNHG20-204ENST00000566583 TRIM37O94972 964 aa20.08■□□□□ 0.81
SNHG20-204ENST00000566583 SLC4A9Q96Q91 983 aa20.08■□□□□ 0.81
SNHG20-204ENST00000566583 EP400Q96L91 3159 aa20.08■□□□□ 0.8
SNHG20-204ENST00000566583 MYH14Q7Z406 1995 aaKnown RBP20.07■□□□□ 0.8
SNHG20-204ENST00000566583 RREB1Q92766 1687 aa20.07■□□□□ 0.8
SNHG20-204ENST00000566583 PALLDQ8WX93 1383 aa20.07■□□□□ 0.8
SNHG20-204ENST00000566583 SOS1Q07889 1333 aaPredicted RBP20.07■□□□□ 0.8
SNHG20-204ENST00000566583 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
SNHG20-204ENST00000566583 TTC5Q8N0Z6 440 aa20.06■□□□□ 0.8
SNHG20-204ENST00000566583 SMARCC1Q92922 1105 aaPredicted RBP20.06■□□□□ 0.8
SNHG20-204ENST00000566583 FMNL2Q96PY5 1086 aa20.06■□□□□ 0.8
SNHG20-204ENST00000566583 VAMP4O75379 141 aa20.05■□□□□ 0.8
SNHG20-204ENST00000566583 HOXB7P09629 217 aa20.05■□□□□ 0.8
SNHG20-204ENST00000566583 CT47B1P0C2W7 299 aaPredicted RBP20.04■□□□□ 0.8
SNHG20-204ENST00000566583 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
SNHG20-204ENST00000566583 PRAMEF22A3QJZ6 481 aa20.03■□□□□ 0.8
SNHG20-204ENST00000566583 TWISTNBQ3B726 338 aaPredicted RBP20.03■□□□□ 0.8
SNHG20-204ENST00000566583 PTCD1O75127 700 aaKnown RBP20.02■□□□□ 0.8
SNHG20-204ENST00000566583 SNRPA1P09661 255 aaKnown RBP20.02■□□□□ 0.8
SNHG20-204ENST00000566583 LOC102724428A0A0B4J2F2 783 aa20.02■□□□□ 0.79
SNHG20-204ENST00000566583 ELL2O00472 640 aaPredicted RBP20.02■□□□□ 0.79
SNHG20-204ENST00000566583 PLSCR1O15162 318 aa20.02■□□□□ 0.79
SNHG20-204ENST00000566583 SIK1P57059 783 aa20.02■□□□□ 0.79
SNHG20-204ENST00000566583 ZNF428Q96B54 188 aa20■□□□□ 0.79
SNHG20-204ENST00000566583 RBM42Q9BTD8 480 aaKnown RBP20■□□□□ 0.79
SNHG20-204ENST00000566583 USP16Q9Y5T5 823 aa20■□□□□ 0.79
SNHG20-204ENST00000566583 ITPK1Q13572 414 aa19.99■□□□□ 0.79
SNHG20-204ENST00000566583 DNAJC10Q8IXB1 793 aa19.99■□□□□ 0.79
SNHG20-204ENST00000566583 RARSP54136 660 aaKnown RBP19.98■□□□□ 0.79
SNHG20-204ENST00000566583 PROM2Q8N271 834 aa19.98■□□□□ 0.79
SNHG20-204ENST00000566583 C4BP0C0L5 1744 aa19.97■□□□□ 0.79
SNHG20-204ENST00000566583 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
SNHG20-204ENST00000566583 NUP188Q5SRE5 1749 aa19.96■□□□□ 0.79
SNHG20-204ENST00000566583 UBR3Q6ZT12 1888 aa19.96■□□□□ 0.79
SNHG20-204ENST00000566583 APBA3O96018 575 aa19.96■□□□□ 0.79
SNHG20-204ENST00000566583 CYP19A1P11511 503 aaPredicted RBP19.96■□□□□ 0.79
SNHG20-204ENST00000566583 ALDH1L2Q3SY69 923 aa19.96■□□□□ 0.79
SNHG20-204ENST00000566583 ILDR2Q71H61 639 aa19.96■□□□□ 0.79
SNHG20-204ENST00000566583 LRRC4BQ9NT99 713 aa19.96■□□□□ 0.79
SNHG20-204ENST00000566583 ATP6V1AP38606 617 aa19.95■□□□□ 0.78
SNHG20-204ENST00000566583 BRPF1P55201 1214 aaPredicted RBP19.95■□□□□ 0.78
SNHG20-204ENST00000566583 PDIA6Q15084 440 aa19.95■□□□□ 0.78
SNHG20-204ENST00000566583 HDGFL1Q5TGJ6 251 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms