RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 THUMPD2Q9BTF0 503 aaKnown RBP19.35■□□□□ 0.69
SPG7-213ENST00000566221 SF3B2Q13435 895 aaKnown RBP19.34■□□□□ 0.69
SPG7-213ENST00000566221 WDR63Q8IWG1 891 aa19.34■□□□□ 0.69
SPG7-213ENST00000566221 SLC52A2Q9HAB3 445 aa19.34■□□□□ 0.69
SPG7-213ENST00000566221 TNS1Q9HBL0 1735 aaKnown RBP19.34■□□□□ 0.69
SPG7-213ENST00000566221 IL16Q14005 1332 aa19.33■□□□□ 0.69
SPG7-213ENST00000566221 FAM196AQ6ZSG2 479 aa19.33■□□□□ 0.68
SPG7-213ENST00000566221 DEFB132Q7Z7B7 95 aa19.33■□□□□ 0.68
SPG7-213ENST00000566221 CABP4P57796 275 aa19.32■□□□□ 0.68
SPG7-213ENST00000566221 FAM182BQ5T319 152 aa19.32■□□□□ 0.68
SPG7-213ENST00000566221 TMOD3Q9NYL9 352 aa19.31■□□□□ 0.68
SPG7-213ENST00000566221 GOLGA2Q08379 1002 aa19.3■□□□□ 0.68
SPG7-213ENST00000566221 IFT57Q9NWB7 429 aa19.3■□□□□ 0.68
SPG7-213ENST00000566221 GNAI1P63096 354 aa19.29■□□□□ 0.68
SPG7-213ENST00000566221 TAF7Q15545 349 aaPredicted RBP19.29■□□□□ 0.68
SPG7-213ENST00000566221 SYTL4Q96C24 671 aaPredicted RBP19.29■□□□□ 0.68
SPG7-213ENST00000566221 ACSBG1Q96GR2 724 aa19.29■□□□□ 0.68
SPG7-213ENST00000566221 PRIM1P49642 420 aaKnown RBP19.28■□□□□ 0.68
SPG7-213ENST00000566221 NFATC2IPQ8NCF5 419 aa19.28■□□□□ 0.68
SPG7-213ENST00000566221 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
SPG7-213ENST00000566221 BABAM1Q9NWV8 329 aa19.28■□□□□ 0.68
SPG7-213ENST00000566221 RGPD3A6NKT7 1758 aaPredicted RBP19.28■□□□□ 0.68
SPG7-213ENST00000566221 RGPD4Q7Z3J3 1758 aa19.28■□□□□ 0.68
SPG7-213ENST00000566221 LY75O60449 1722 aa19.28■□□□□ 0.68
SPG7-213ENST00000566221 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.67
SPG7-213ENST00000566221 LAMB4A4D0S4 1761 aa19.27■□□□□ 0.67
SPG7-213ENST00000566221 CICQ96RK0 1608 aaPredicted RBP19.26■□□□□ 0.67
SPG7-213ENST00000566221 PSDA5PKW4 1024 aaPredicted RBP19.26■□□□□ 0.67
SPG7-213ENST00000566221 E9PSI1 815 aa19.26■□□□□ 0.67
SPG7-213ENST00000566221 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
SPG7-213ENST00000566221 PIGBQ92521 554 aa19.26■□□□□ 0.67
SPG7-213ENST00000566221 MYH16Q9H6N6 1097 aa19.26■□□□□ 0.67
SPG7-213ENST00000566221 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
SPG7-213ENST00000566221 BTBD11A6QL63 1104 aa19.25■□□□□ 0.67
SPG7-213ENST00000566221 CHL1O00533 1208 aa19.25■□□□□ 0.67
SPG7-213ENST00000566221 KCNQ2O43526 872 aa19.25■□□□□ 0.67
SPG7-213ENST00000566221 TSPYL4Q9UJ04 414 aa19.25■□□□□ 0.67
SPG7-213ENST00000566221 KCPQ6ZWJ8 1503 aa19.25■□□□□ 0.67
SPG7-213ENST00000566221 C5P01031 1676 aa19.24■□□□□ 0.67
SPG7-213ENST00000566221 BCL11BQ9C0K0 894 aaPredicted RBP19.24■□□□□ 0.67
SPG7-213ENST00000566221 CENPBP07199 599 aaPredicted RBP19.23■□□□□ 0.67
SPG7-213ENST00000566221 SLFN5Q08AF3 891 aa19.23■□□□□ 0.67
SPG7-213ENST00000566221 SPINK5Q9NQ38 1064 aaPredicted RBP19.23■□□□□ 0.67
SPG7-213ENST00000566221 MBIPQ9NS73 344 aa19.23■□□□□ 0.67
SPG7-213ENST00000566221 FANCIQ9NVI1 1328 aa19.23■□□□□ 0.67
SPG7-213ENST00000566221 LRP5O75197 1615 aa19.22■□□□□ 0.67
SPG7-213ENST00000566221 TRIM37O94972 964 aa19.22■□□□□ 0.67
SPG7-213ENST00000566221 ZNF790Q6PG37 636 aa19.22■□□□□ 0.67
SPG7-213ENST00000566221 TTC5Q8N0Z6 440 aa19.22■□□□□ 0.67
SPG7-213ENST00000566221 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
SPG7-213ENST00000566221 TJP1Q07157 1748 aa19.22■□□□□ 0.67
SPG7-213ENST00000566221 TAF1LQ8IZX4 1826 aa19.21■□□□□ 0.67
SPG7-213ENST00000566221 TSR2Q969E8 191 aaKnown RBP19.21■□□□□ 0.67
SPG7-213ENST00000566221 MIS18AQ9NYP9 233 aa19.21■□□□□ 0.67
SPG7-213ENST00000566221 SLC39A6Q13433 755 aa19.2■□□□□ 0.66
SPG7-213ENST00000566221 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
SPG7-213ENST00000566221 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
SPG7-213ENST00000566221 COL5A3P25940 1745 aaPredicted RBP19.2■□□□□ 0.66
SPG7-213ENST00000566221 PALLDQ8WX93 1383 aa19.19■□□□□ 0.66
SPG7-213ENST00000566221 CACNA1FO60840 1977 aa19.19■□□□□ 0.66
SPG7-213ENST00000566221 PTF1AQ7RTS3 328 aa19.19■□□□□ 0.66
SPG7-213ENST00000566221 TRMT2AQ8IZ69 625 aaKnown RBP19.19■□□□□ 0.66
SPG7-213ENST00000566221 ATG3Q9NT62 314 aa19.19■□□□□ 0.66
SPG7-213ENST00000566221 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
SPG7-213ENST00000566221 KCNQ3O43525 872 aa19.17■□□□□ 0.66
SPG7-213ENST00000566221 EIF4A1P60842 406 aaKnown RBP19.17■□□□□ 0.66
SPG7-213ENST00000566221 FMNL2Q96PY5 1086 aa19.17■□□□□ 0.66
SPG7-213ENST00000566221 HEG1Q9ULI3 1381 aa19.16■□□□□ 0.66
SPG7-213ENST00000566221 RREB1Q92766 1687 aa19.15■□□□□ 0.66
SPG7-213ENST00000566221 ZNF496Q96IT1 587 aaPredicted RBP19.15■□□□□ 0.66
SPG7-213ENST00000566221 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
SPG7-213ENST00000566221 YY1P25490 414 aa19.14■□□□□ 0.65
SPG7-213ENST00000566221 BAG6P46379 1132 aa19.14■□□□□ 0.65
SPG7-213ENST00000566221 SOS1Q07889 1333 aaPredicted RBP19.14■□□□□ 0.65
SPG7-213ENST00000566221 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
SPG7-213ENST00000566221 VSIG10Q8N0Z9 540 aa19.13■□□□□ 0.65
SPG7-213ENST00000566221 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
SPG7-213ENST00000566221 LOC102724428A0A0B4J2F2 783 aa19.12■□□□□ 0.65
SPG7-213ENST00000566221 APBA3O96018 575 aa19.12■□□□□ 0.65
SPG7-213ENST00000566221 HOXB7P09629 217 aa19.12■□□□□ 0.65
SPG7-213ENST00000566221 SIK1P57059 783 aa19.12■□□□□ 0.65
SPG7-213ENST00000566221 PLSCR1O15162 318 aa19.11■□□□□ 0.65
SPG7-213ENST00000566221 SNRPA1P09661 255 aaKnown RBP19.11■□□□□ 0.65
SPG7-213ENST00000566221 KRT24Q2M2I5 525 aa19.11■□□□□ 0.65
SPG7-213ENST00000566221 NUP188Q5SRE5 1749 aa19.11■□□□□ 0.65
SPG7-213ENST00000566221 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
SPG7-213ENST00000566221 GIGYF1O75420 1035 aaPredicted RBP19.1■□□□□ 0.65
SPG7-213ENST00000566221 CT47B1P0C2W7 299 aaPredicted RBP19.1■□□□□ 0.65
SPG7-213ENST00000566221 TWISTNBQ3B726 338 aaPredicted RBP19.1■□□□□ 0.65
SPG7-213ENST00000566221 C8orf58Q8NAV2 365 aa19.1■□□□□ 0.65
SPG7-213ENST00000566221 C4BP0C0L5 1744 aa19.1■□□□□ 0.65
SPG7-213ENST00000566221 ATP6V1AP38606 617 aa19.08■□□□□ 0.64
SPG7-213ENST00000566221 R3HDM1Q15032 1099 aaKnown RBP19.08■□□□□ 0.64
SPG7-213ENST00000566221 SLC27A3Q5K4L6 730 aa19.08■□□□□ 0.64
SPG7-213ENST00000566221 TSPYL6Q8N831 410 aa19.08■□□□□ 0.64
SPG7-213ENST00000566221 SLC4A9Q96Q91 983 aa19.08■□□□□ 0.64
SPG7-213ENST00000566221 TEX13AQ9BXU3 409 aaPredicted RBP19.08■□□□□ 0.64
SPG7-213ENST00000566221 CHMP4AQ9BY43 222 aa19.08■□□□□ 0.64
SPG7-213ENST00000566221 CCNL1Q9UK58 526 aaPredicted RBP19.08■□□□□ 0.64
SPG7-213ENST00000566221 ELL2O00472 640 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms