RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 CDC42BPGQ6DT37 1551 aa4□□□□□ -1.77
CHD9-216ENST00000565803 OSBPP22059 807 aa4□□□□□ -1.77
CHD9-216ENST00000565803 NAALADL2Q58DX5 795 aa4□□□□□ -1.77
CHD9-216ENST00000565803 ZFYVE27Q5T4F4 411 aa4□□□□□ -1.77
CHD9-216ENST00000565803 UBXN4Q92575 508 aa4□□□□□ -1.77
CHD9-216ENST00000565803 SECISBP2LQ93073 1101 aaKnown RBP4□□□□□ -1.77
CHD9-216ENST00000565803 BIN2Q9UBW5 565 aaPredicted RBP4□□□□□ -1.77
CHD9-216ENST00000565803 BCL9O00512 1426 aa4□□□□□ -1.77
CHD9-216ENST00000565803 NOS1P29475 1434 aa4□□□□□ -1.77
CHD9-216ENST00000565803 RRBP1Q9P2E9 1410 aaKnown RBP4□□□□□ -1.77
CHD9-216ENST00000565803 OTUD5Q96G74 571 aa4□□□□□ -1.77
CHD9-216ENST00000565803 LARP6Q9BRS8 491 aaKnown RBP4□□□□□ -1.77
CHD9-216ENST00000565803 POLR3EQ9NVU0 708 aa4□□□□□ -1.77
CHD9-216ENST00000565803 COL14A1Q05707 1796 aaKnown RBP3.99□□□□□ -1.77
CHD9-216ENST00000565803 FOXD4Q12950 439 aaPredicted RBP3.99□□□□□ -1.77
CHD9-216ENST00000565803 TSNAXIP1Q2TAA8 658 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 C9orf131Q5VYM1 1079 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 GPR153Q6NV75 609 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 PLPP6Q8IY26 295 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 KIAA1522Q9P206 1035 aaPredicted RBP3.99□□□□□ -1.77
CHD9-216ENST00000565803 TMA7Q9Y2S6 64 aaKnown RBP3.99□□□□□ -1.77
CHD9-216ENST00000565803 PXDNQ92626 1479 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 KNDC1Q76NI1 1749 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 TRPC5Q9UL62 973 aaPredicted RBP3.99□□□□□ -1.77
CHD9-216ENST00000565803 SBF2Q86WG5 1849 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 GCC2Q8IWJ2 1684 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 PAX3P23760 479 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 GTF2F1P35269 517 aaKnown RBP eCLIP3.99□□□□□ -1.77
CHD9-216ENST00000565803 SIRT1Q96EB6 747 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 TANGO6Q9C0B7 1094 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 GDPD2Q9HCC8 539 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 WWC3Q9ULE0 1092 aa3.99□□□□□ -1.77
CHD9-216ENST00000565803 ADAMTS7Q9UKP4 1686 aa3.98□□□□□ -1.77
CHD9-216ENST00000565803 TULP4Q9NRJ4 1543 aa3.98□□□□□ -1.77
CHD9-216ENST00000565803 NUTM2FA1L443 756 aa3.98□□□□□ -1.77
CHD9-216ENST00000565803 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
CHD9-216ENST00000565803 CHMP4BQ9H444 224 aaKnown RBP3.98□□□□□ -1.77
CHD9-216ENST00000565803 CCER2I3L3R5 266 aa3.98□□□□□ -1.77
CHD9-216ENST00000565803 DPH6Q7L8W6 267 aa3.98□□□□□ -1.77
CHD9-216ENST00000565803 METTL14Q9HCE5 456 aaKnown RBP3.98□□□□□ -1.77
CHD9-216ENST00000565803 ADGRL2O95490 1459 aa3.98□□□□□ -1.77
CHD9-216ENST00000565803 ENOX2Q16206 610 aaKnown RBP3.97□□□□□ -1.77
CHD9-216ENST00000565803 PMFBP1Q8TBY8 1022 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 DCBLD2Q96PD2 775 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 SUGT1Q9Y2Z0 365 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 SENP3-EIF4A1A0A087X0R7 540 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 CREB3O43889 395 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 APPP05067 770 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 RGS19P49795 217 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 SLC52A1Q9NWF4 448 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 SLAIN2Q9P270 581 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 ZC3H6P61129 1189 aaKnown RBP3.97□□□□□ -1.77
CHD9-216ENST00000565803 SF3A1Q15459 793 aaKnown RBP3.97□□□□□ -1.77
CHD9-216ENST00000565803 CREBRFQ8IUR6 639 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 PAF1Q8N7H5 531 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 NPDC1Q9NQX5 325 aaPredicted RBP3.97□□□□□ -1.77
CHD9-216ENST00000565803 TNS2Q63HR2 1409 aa3.97□□□□□ -1.77
CHD9-216ENST00000565803 MLLT3P42568 568 aaPredicted RBP3.96□□□□□ -1.77
CHD9-216ENST00000565803 GOLGA2Q08379 1002 aa3.96□□□□□ -1.77
CHD9-216ENST00000565803 HSP90AB2PQ58FF8 381 aa3.96□□□□□ -1.77
CHD9-216ENST00000565803 CCDC181Q5TID7 509 aa3.96□□□□□ -1.77
CHD9-216ENST00000565803 PARP9Q8IXQ6 854 aa3.96□□□□□ -1.77
CHD9-216ENST00000565803 VRTNQ9H8Y1 702 aa3.96□□□□□ -1.77
CHD9-216ENST00000565803 IQSEC3Q9UPP2 1182 aaPredicted RBP3.96□□□□□ -1.77
CHD9-216ENST00000565803 HFM1A2PYH4 1435 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 MYO5BQ9ULV0 1848 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 DUOX2Q9NRD8 1548 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 PHF14O94880 888 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 ERCC5P28715 1186 aaPredicted RBP3.96□□□□□ -1.78
CHD9-216ENST00000565803 GLMNQ92990 594 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 SGSM3Q96HU1 749 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 SOS2Q07890 1332 aaPredicted RBP3.96□□□□□ -1.78
CHD9-216ENST00000565803 ADAMTS13Q76LX8 1427 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 PTPRUQ92729 1446 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 CNGB1Q14028 1251 aaPredicted RBP3.96□□□□□ -1.78
CHD9-216ENST00000565803 MAMSTRQ6ZN01 415 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 PBXIP1Q96AQ6 731 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 EEA1Q15075 1411 aa3.96□□□□□ -1.78
CHD9-216ENST00000565803 ZNF16P17020 682 aaPredicted RBP3.95□□□□□ -1.78
CHD9-216ENST00000565803 ESF1Q9H501 851 aaKnown RBP3.95□□□□□ -1.78
CHD9-216ENST00000565803 ADGRL3Q9HAR2 1447 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 PXDNLA1KZ92 1463 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 TRPM3Q9HCF6 1732 aaPredicted RBP3.95□□□□□ -1.78
CHD9-216ENST00000565803 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 GRIPAP1Q4V328 841 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 COG6Q9Y2V7 657 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 PCDHGA4Q9Y5G9 962 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 CCDC141Q6ZP82 1450 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 TCERG1O14776 1098 aaKnown RBP3.95□□□□□ -1.78
CHD9-216ENST00000565803 POLD1P28340 1107 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 BIRC2Q13490 618 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 MLECQ14165 292 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 MTUS2Q5JR59 1369 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 FTSJ3Q8IY81 847 aaKnown RBP3.95□□□□□ -1.78
CHD9-216ENST00000565803 TRIM52Q96A61 297 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 ALS2Q96Q42 1657 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 SLC4A5Q9BY07 1137 aa3.95□□□□□ -1.78
CHD9-216ENST00000565803 QTRT2Q9H974 415 aaKnown RBP3.95□□□□□ -1.78
CHD9-216ENST00000565803 CASKIN1Q8WXD9 1431 aa3.94□□□□□ -1.78
CHD9-216ENST00000565803 PDE6BP35913 854 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms