RNA–Protein interactions for RNA: ENST00000565605.5

CNOT1-207, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-207ENST00000565605 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
CNOT1-207ENST00000565605 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
CNOT1-207ENST00000565605 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
CNOT1-207ENST00000565605 KLHL34Q8N239 644 aa13.1□□□□□ -0.31
CNOT1-207ENST00000565605 DDX54Q8TDD1 881 aaKnown RBP13.1□□□□□ -0.31
CNOT1-207ENST00000565605 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
CNOT1-207ENST00000565605 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
CNOT1-207ENST00000565605 CEP350Q5VT06 3117 aa13.09□□□□□ -0.31
CNOT1-207ENST00000565605 CHD4Q14839 1912 aa13.09□□□□□ -0.31
CNOT1-207ENST00000565605 SLC27A3Q5K4L6 730 aa13.08□□□□□ -0.32
CNOT1-207ENST00000565605 NBPF6Q5VWK0 638 aa13.08□□□□□ -0.32
CNOT1-207ENST00000565605 SLC16A10Q8TF71 515 aa13.08□□□□□ -0.32
CNOT1-207ENST00000565605 NBPF4Q96M43 638 aa13.08□□□□□ -0.32
CNOT1-207ENST00000565605 NPC1L1Q9UHC9 1359 aa13.07□□□□□ -0.32
CNOT1-207ENST00000565605 POLD1P28340 1107 aa13.07□□□□□ -0.32
CNOT1-207ENST00000565605 PRIM1P49642 420 aaKnown RBP13.07□□□□□ -0.32
CNOT1-207ENST00000565605 USHBP1Q8N6Y0 703 aa13.07□□□□□ -0.32
CNOT1-207ENST00000565605 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
CNOT1-207ENST00000565605 TFCP2L1Q9NZI6 479 aa13.07□□□□□ -0.32
CNOT1-207ENST00000565605 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
CNOT1-207ENST00000565605 CNGB1Q14028 1251 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-207ENST00000565605 SYTL4Q96C24 671 aaPredicted RBP13.06□□□□□ -0.32
CNOT1-207ENST00000565605 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-207ENST00000565605 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.325e-11■■■□□ 16.6
CNOT1-207ENST00000565605 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
CNOT1-207ENST00000565605 MAP2P11137 1827 aaKnown RBP13.04□□□□□ -0.32
CNOT1-207ENST00000565605 MEGF6O75095 1541 aa13.04□□□□□ -0.32
CNOT1-207ENST00000565605 EIF4A2Q14240 407 aaKnown RBP13.04□□□□□ -0.32
CNOT1-207ENST00000565605 COL24A1Q17RW2 1714 aa13.04□□□□□ -0.32
CNOT1-207ENST00000565605 MAMSTRQ6ZN01 415 aa13.03□□□□□ -0.32
CNOT1-207ENST00000565605 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
CNOT1-207ENST00000565605 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
CNOT1-207ENST00000565605 EYA1Q99502 592 aa13.03□□□□□ -0.32
CNOT1-207ENST00000565605 KAT6BQ8WYB5 2073 aa13.03□□□□□ -0.32
CNOT1-207ENST00000565605 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.32
CNOT1-207ENST00000565605 RGPD2P0DJD1 1756 aa13.02□□□□□ -0.32
CNOT1-207ENST00000565605 MTHFSP49914 203 aa13.02□□□□□ -0.33
CNOT1-207ENST00000565605 CCNL1Q9UK58 526 aaPredicted RBP13.02□□□□□ -0.33
CNOT1-207ENST00000565605 QSER1Q2KHR3 1735 aa13.02□□□□□ -0.33
CNOT1-207ENST00000565605 TUBGCP6Q96RT7 1819 aa13.02□□□□□ -0.33
CNOT1-207ENST00000565605 POTEJP0CG39 1038 aa13.01□□□□□ -0.33
CNOT1-207ENST00000565605 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
CNOT1-207ENST00000565605 IGSF1Q8N6C5 1336 aa13□□□□□ -0.33
CNOT1-207ENST00000565605 MSL1Q68DK7 614 aa13□□□□□ -0.33
CNOT1-207ENST00000565605 PCDH11XQ9BZA7 1347 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 PCDH11YQ9BZA8 1340 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 C7P10643 843 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 IFFO2Q5TF58 517 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 SLC39A7Q92504 469 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 LY75O60449 1722 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 DOT1LQ8TEK3 1739 aa12.99□□□□□ -0.33
CNOT1-207ENST00000565605 GRIN3BO60391 1043 aa12.98□□□□□ -0.33
CNOT1-207ENST00000565605 LCE2DQ5TA82 110 aaPredicted RBP12.98□□□□□ -0.33
CNOT1-207ENST00000565605 IL13P35225 146 aa12.97□□□□□ -0.33
CNOT1-207ENST00000565605 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
CNOT1-207ENST00000565605 PLEKHG2Q9H7P9 1386 aa12.96□□□□□ -0.33
CNOT1-207ENST00000565605 DIAPH1O60610 1272 aaKnown RBP12.96□□□□□ -0.33
CNOT1-207ENST00000565605 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.33
CNOT1-207ENST00000565605 CFAP53Q96M91 514 aa12.96□□□□□ -0.33
CNOT1-207ENST00000565605 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.333e-12■■□□□ 14.3
CNOT1-207ENST00000565605 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
CNOT1-207ENST00000565605 PPP2R1AP30153 589 aa12.95□□□□□ -0.34
CNOT1-207ENST00000565605 SULT6B1Q6IMI4 303 aa12.95□□□□□ -0.34
CNOT1-207ENST00000565605 SMIM5Q71RC9 77 aa12.95□□□□□ -0.34
CNOT1-207ENST00000565605 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
CNOT1-207ENST00000565605 PKD1L3Q7Z443 1732 aa12.94□□□□□ -0.34
CNOT1-207ENST00000565605 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-207ENST00000565605 ASTLQ6HA08 431 aaPredicted RBP12.94□□□□□ -0.34
CNOT1-207ENST00000565605 CD2APQ9Y5K6 639 aa12.94□□□□□ -0.34
CNOT1-207ENST00000565605 COL3A1P02461 1466 aaPredicted RBP12.93□□□□□ -0.34
CNOT1-207ENST00000565605 CYP27B1O15528 508 aa12.93□□□□□ -0.34
CNOT1-207ENST00000565605 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
CNOT1-207ENST00000565605 AEBP1Q8IUX7 1158 aa12.93□□□□□ -0.34
CNOT1-207ENST00000565605 KDRP35968 1356 aa12.93□□□□□ -0.34
CNOT1-207ENST00000565605 U2SURPO15042 1029 aaKnown RBP12.92□□□□□ -0.34
CNOT1-207ENST00000565605 ATMINO43313 823 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-207ENST00000565605 HMOX1P09601 288 aa12.92□□□□□ -0.34
CNOT1-207ENST00000565605 MPRIPQ6WCQ1 1025 aa12.92□□□□□ -0.34
CNOT1-207ENST00000565605 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
CNOT1-207ENST00000565605 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
CNOT1-207ENST00000565605 WWC3Q9ULE0 1092 aa12.92□□□□□ -0.34
CNOT1-207ENST00000565605 ADCY9O60503 1353 aa12.92□□□□□ -0.34
CNOT1-207ENST00000565605 PALLDQ8WX93 1383 aa12.92□□□□□ -0.34
CNOT1-207ENST00000565605 PHKG2P15735 406 aa12.91□□□□□ -0.34
CNOT1-207ENST00000565605 MS4A3Q96HJ5 214 aa12.91□□□□□ -0.34
CNOT1-207ENST00000565605 GPBP1L1Q9HC44 474 aaPredicted RBP12.91□□□□□ -0.34
CNOT1-207ENST00000565605 NUDCQ9Y266 331 aa12.91□□□□□ -0.34
CNOT1-207ENST00000565605 HSP90AB1P08238 724 aaKnown RBP12.9□□□□□ -0.34
CNOT1-207ENST00000565605 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-207ENST00000565605 RALBP1Q15311 655 aa12.9□□□□□ -0.34
CNOT1-207ENST00000565605 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
CNOT1-207ENST00000565605 ZNF530Q6P9A1 599 aaPredicted RBP12.9□□□□□ -0.34
CNOT1-207ENST00000565605 C5P01031 1676 aa12.89□□□□□ -0.35
CNOT1-207ENST00000565605 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
CNOT1-207ENST00000565605 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
CNOT1-207ENST00000565605 PHF14O94880 888 aa12.88□□□□□ -0.35
CNOT1-207ENST00000565605 HSPA6P17066 643 aa12.88□□□□□ -0.35
CNOT1-207ENST00000565605 PIGBQ92521 554 aa12.88□□□□□ -0.35
CNOT1-207ENST00000565605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms