RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FOXN1O15353 648 aa12.82□□□□□ -0.36
VPS9D1-205ENST00000565452 ADRA2BP18089 450 aa12.82□□□□□ -0.36
VPS9D1-205ENST00000565452 ITPK1Q13572 414 aa12.82□□□□□ -0.36
VPS9D1-205ENST00000565452 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
VPS9D1-205ENST00000565452 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
VPS9D1-205ENST00000565452 TMOD3Q9NYL9 352 aa12.82□□□□□ -0.36
VPS9D1-205ENST00000565452 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
VPS9D1-205ENST00000565452 FAM161AQ3B820 660 aa12.81□□□□□ -0.36
VPS9D1-205ENST00000565452 MKRN1Q9UHC7 482 aaKnown RBP12.81□□□□□ -0.36
VPS9D1-205ENST00000565452 ASAP1Q9ULH1 1129 aa12.81□□□□□ -0.36
VPS9D1-205ENST00000565452 DOT1LQ8TEK3 1739 aa12.81□□□□□ -0.36
VPS9D1-205ENST00000565452 C5P01031 1676 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 CD163L1Q9NR16 1453 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 C4BP0C0L5 1744 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 GYS1P13807 737 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 LMNB1P20700 586 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 RC3H1Q5TC82 1133 aaKnown RBP12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 DPY19L2Q6NUT2 758 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 L3MBTL2Q969R5 705 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 SPG7Q9UQ90 795 aa12.8□□□□□ -0.36
VPS9D1-205ENST00000565452 MLLT1Q03111 559 aaPredicted RBP12.79□□□□□ -0.36
VPS9D1-205ENST00000565452 PUS7Q96PZ0 661 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-205ENST00000565452 ROCK2O75116 1388 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-205ENST00000565452 SMG6Q86US8 1419 aaKnown RBP12.79□□□□□ -0.36
VPS9D1-205ENST00000565452 RPS6KA4O75676 772 aa12.78□□□□□ -0.36
VPS9D1-205ENST00000565452 RRS1Q15050 365 aaKnown RBP12.78□□□□□ -0.36
VPS9D1-205ENST00000565452 USP54Q70EL1 1684 aa12.77□□□□□ -0.36
VPS9D1-205ENST00000565452 LTN1O94822 1766 aa12.77□□□□□ -0.36
VPS9D1-205ENST00000565452 ABHD8Q96I13 439 aa12.77□□□□□ -0.37
VPS9D1-205ENST00000565452 CHRNA5P30532 468 aa12.76□□□□□ -0.37
VPS9D1-205ENST00000565452 LBX1P52954 281 aa12.76□□□□□ -0.37
VPS9D1-205ENST00000565452 CHADLQ6NUI6 762 aa12.76□□□□□ -0.37
VPS9D1-205ENST00000565452 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
VPS9D1-205ENST00000565452 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
VPS9D1-205ENST00000565452 RTL1A6NKG5 1358 aa12.76□□□□□ -0.37
VPS9D1-205ENST00000565452 A0A1W2PP64 1363 aa12.75□□□□□ -0.37
VPS9D1-205ENST00000565452 RGS19P49795 217 aa12.75□□□□□ -0.37
VPS9D1-205ENST00000565452 HSP90AB2PQ58FF8 381 aa12.75□□□□□ -0.37
VPS9D1-205ENST00000565452 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.75□□□□□ -0.37
VPS9D1-205ENST00000565452 FAM208AQ9UK61 1670 aaKnown RBP12.74□□□□□ -0.37
VPS9D1-205ENST00000565452 POTECB2RU33 542 aa12.74□□□□□ -0.37
VPS9D1-205ENST00000565452 RASSF7Q02833 373 aa12.74□□□□□ -0.37
VPS9D1-205ENST00000565452 WBP1LQ9NX94 342 aa12.74□□□□□ -0.37
VPS9D1-205ENST00000565452 CCDC85CA6NKD9 419 aa12.73□□□□□ -0.37
VPS9D1-205ENST00000565452 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
VPS9D1-205ENST00000565452 UBR3Q6ZT12 1888 aa12.73□□□□□ -0.37
VPS9D1-205ENST00000565452 TAF1LQ8IZX4 1826 aa12.73□□□□□ -0.37
VPS9D1-205ENST00000565452 INSRP06213 1382 aa12.72□□□□□ -0.37
VPS9D1-205ENST00000565452 CNTNAP1P78357 1384 aa12.72□□□□□ -0.37
VPS9D1-205ENST00000565452 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
VPS9D1-205ENST00000565452 CNTNAP4Q9C0A0 1308 aa12.72□□□□□ -0.37
VPS9D1-205ENST00000565452 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
VPS9D1-205ENST00000565452 VEGFBP49765 207 aa12.72□□□□□ -0.37
VPS9D1-205ENST00000565452 FYB1O15117 783 aa12.71□□□□□ -0.37
VPS9D1-205ENST00000565452 FKBP8Q14318 412 aa12.71□□□□□ -0.37
VPS9D1-205ENST00000565452 TTLL6Q8N841 843 aa12.71□□□□□ -0.37
VPS9D1-205ENST00000565452 CARD11Q9BXL7 1154 aa12.71□□□□□ -0.37
VPS9D1-205ENST00000565452 KIF13BQ9NQT8 1826 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 TMEM88BA6NKF7 163 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 ERVV-2B6SEH9 535 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 TM4SF1P30408 202 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 DDR1Q08345 913 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 SLC4A9Q96Q91 983 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 TOGARAM1Q9Y4F4 1720 aa12.7□□□□□ -0.38
VPS9D1-205ENST00000565452 PHKG2P15735 406 aa12.69□□□□□ -0.38
VPS9D1-205ENST00000565452 GGNBP2Q9H3C7 697 aa12.69□□□□□ -0.38
VPS9D1-205ENST00000565452 SRP68Q9UHB9 627 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-205ENST00000565452 TNRC6CQ9HCJ0 1690 aaKnown RBP12.69□□□□□ -0.38
VPS9D1-205ENST00000565452 KDM6AO15550 1401 aaPredicted RBP12.69□□□□□ -0.38
VPS9D1-205ENST00000565452 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-205ENST00000565452 ZPR1O75312 459 aa12.68□□□□□ -0.38
VPS9D1-205ENST00000565452 ERFEQ4G0M1 354 aa12.68□□□□□ -0.38
VPS9D1-205ENST00000565452 H0YIN7 160 aa12.67□□□□□ -0.38
VPS9D1-205ENST00000565452 HSPA8P11142 646 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-205ENST00000565452 DEFB115Q30KQ5 88 aa12.67□□□□□ -0.38
VPS9D1-205ENST00000565452 KIAA1551Q9HCM1 1747 aa12.67□□□□□ -0.38
VPS9D1-205ENST00000565452 FLT4P35916 1363 aa12.67□□□□□ -0.38
VPS9D1-205ENST00000565452 KIF24Q5T7B8 1368 aa12.67□□□□□ -0.38
VPS9D1-205ENST00000565452 USP42Q9H9J4 1324 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-205ENST00000565452 C4AP0C0L4 1744 aa12.66□□□□□ -0.38
VPS9D1-205ENST00000565452 IQCA1LA6NCM1 817 aa12.66□□□□□ -0.38
VPS9D1-205ENST00000565452 HSP90AB1P08238 724 aaKnown RBP12.66□□□□□ -0.38
VPS9D1-205ENST00000565452 LDHDQ86WU2 507 aa12.66□□□□□ -0.38
VPS9D1-205ENST00000565452 PASKQ96RG2 1323 aa12.65□□□□□ -0.38
VPS9D1-205ENST00000565452 NFKBIEO00221 500 aa12.65□□□□□ -0.38
VPS9D1-205ENST00000565452 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
VPS9D1-205ENST00000565452 CABP4P57796 275 aa12.65□□□□□ -0.38
VPS9D1-205ENST00000565452 NEUROD1Q13562 356 aa12.65□□□□□ -0.38
VPS9D1-205ENST00000565452 C2CD5Q86YS7 1000 aa12.65□□□□□ -0.38
VPS9D1-205ENST00000565452 BEGAINQ9BUH8 593 aa12.65□□□□□ -0.38
VPS9D1-205ENST00000565452 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.39
VPS9D1-205ENST00000565452 PPM1GO15355 546 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-205ENST00000565452 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
VPS9D1-205ENST00000565452 DDNO94850 711 aaPredicted RBP12.64□□□□□ -0.39
VPS9D1-205ENST00000565452 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
VPS9D1-205ENST00000565452 POTEJP0CG39 1038 aa12.64□□□□□ -0.39
VPS9D1-205ENST00000565452 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
VPS9D1-205ENST00000565452 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms