RNA–Protein interactions for RNA: ENST00000565384.1

NSMCE1-209, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-209ENST00000565384 KDRP35968 1356 aa15.98■□□□□ 0.15
NSMCE1-209ENST00000565384 WWC3Q9ULE0 1092 aa15.97■□□□□ 0.15
NSMCE1-209ENST00000565384 GPBP1L1Q9HC44 474 aaPredicted RBP15.96■□□□□ 0.15
NSMCE1-209ENST00000565384 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
NSMCE1-209ENST00000565384 ZNF831Q5JPB2 1677 aa15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 HSP90AB1P08238 724 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 MMP10P09238 476 aa15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 ZNF526Q8TF50 670 aaPredicted RBP15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 SLC4A9Q96Q91 983 aa15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 PANK3Q9H999 370 aa15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 RTCBQ9Y3I0 505 aaKnown RBP15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 KDM6AO15550 1401 aaPredicted RBP15.93■□□□□ 0.14
NSMCE1-209ENST00000565384 PLEKHO1Q53GL0 409 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-209ENST00000565384 TRAPPC3LQ5T215 181 aa15.92■□□□□ 0.14
NSMCE1-209ENST00000565384 DCAF5Q96JK2 942 aa15.92■□□□□ 0.14
NSMCE1-209ENST00000565384 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
NSMCE1-209ENST00000565384 PCGF6Q9BYE7 350 aa15.92■□□□□ 0.14
NSMCE1-209ENST00000565384 CICQ96RK0 1608 aaPredicted RBP15.92■□□□□ 0.14
NSMCE1-209ENST00000565384 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
NSMCE1-209ENST00000565384 COL5A3P25940 1745 aaPredicted RBP15.91■□□□□ 0.14
NSMCE1-209ENST00000565384 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
NSMCE1-209ENST00000565384 EIF4G2P78344 907 aaKnown RBP eCLIP15.91■□□□□ 0.14
NSMCE1-209ENST00000565384 CNTNAP4Q9C0A0 1308 aa15.91■□□□□ 0.14
NSMCE1-209ENST00000565384 KIF13BQ9NQT8 1826 aa15.9■□□□□ 0.14
NSMCE1-209ENST00000565384 ADRA2BP18089 450 aa15.9■□□□□ 0.14
NSMCE1-209ENST00000565384 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
NSMCE1-209ENST00000565384 ZNF530Q6P9A1 599 aaPredicted RBP15.9■□□□□ 0.14
NSMCE1-209ENST00000565384 KIAA1551Q9HCM1 1747 aa15.9■□□□□ 0.14
NSMCE1-209ENST00000565384 C10orf71Q711Q0 1435 aa15.89■□□□□ 0.13
NSMCE1-209ENST00000565384 CABP4P57796 275 aa15.89■□□□□ 0.13
NSMCE1-209ENST00000565384 RC3H1Q5TC82 1133 aaKnown RBP15.89■□□□□ 0.13
NSMCE1-209ENST00000565384 NLGN1Q8N2Q7 840 aa15.89■□□□□ 0.13
NSMCE1-209ENST00000565384 ARHGEF1Q92888 912 aaKnown RBP15.89■□□□□ 0.13
NSMCE1-209ENST00000565384 RPS6KA4O75676 772 aa15.88■□□□□ 0.13
NSMCE1-209ENST00000565384 TGFB2P61812 414 aa15.88■□□□□ 0.13
NSMCE1-209ENST00000565384 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
NSMCE1-209ENST00000565384 C4AP0C0L4 1744 aa15.88■□□□□ 0.13
NSMCE1-209ENST00000565384 N4BP2Q86UW6 1770 aaPredicted RBP15.87■□□□□ 0.13
NSMCE1-209ENST00000565384 GYS1P13807 737 aa15.87■□□□□ 0.13
NSMCE1-209ENST00000565384 RFC4P35249 363 aa15.87■□□□□ 0.13
NSMCE1-209ENST00000565384 MTHFSP49914 203 aa15.87■□□□□ 0.13
NSMCE1-209ENST00000565384 C1orf141Q5JVX7 400 aa15.87■□□□□ 0.13
NSMCE1-209ENST00000565384 MORC1Q86VD1 984 aa15.87■□□□□ 0.13
NSMCE1-209ENST00000565384 CCDC87Q9NVE4 849 aa15.87■□□□□ 0.13
NSMCE1-209ENST00000565384 BCS1LQ9Y276 419 aa15.86■□□□□ 0.13
NSMCE1-209ENST00000565384 A0A0G2JLW4 131 aa15.85■□□□□ 0.13
NSMCE1-209ENST00000565384 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
NSMCE1-209ENST00000565384 HSPA6P17066 643 aa15.85■□□□□ 0.13
NSMCE1-209ENST00000565384 SULT6B1Q6IMI4 303 aa15.85■□□□□ 0.13
NSMCE1-209ENST00000565384 PARP3Q9Y6F1 533 aa15.85■□□□□ 0.13
NSMCE1-209ENST00000565384 KIF3CO14782 793 aa15.84■□□□□ 0.13
NSMCE1-209ENST00000565384 MYH14Q7Z406 1995 aaKnown RBP15.84■□□□□ 0.13
NSMCE1-209ENST00000565384 TJP1Q07157 1748 aa15.83■□□□□ 0.13
NSMCE1-209ENST00000565384 DPEP1P16444 411 aa15.83■□□□□ 0.12
NSMCE1-209ENST00000565384 CRKLP46109 303 aaKnown RBP15.83■□□□□ 0.12
NSMCE1-209ENST00000565384 NFATC2IPQ8NCF5 419 aa15.83■□□□□ 0.12
NSMCE1-209ENST00000565384 IL13P35225 146 aa15.82■□□□□ 0.12
NSMCE1-209ENST00000565384 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
NSMCE1-209ENST00000565384 FCHSD2O94868 740 aa15.81■□□□□ 0.12
NSMCE1-209ENST00000565384 BRCA1P38398 1863 aaKnown RBP15.81■□□□□ 0.12
NSMCE1-209ENST00000565384 ARHGAP27Q6ZUM4 889 aa15.81■□□□□ 0.12
NSMCE1-209ENST00000565384 USP42Q9H9J4 1324 aaKnown RBP15.81■□□□□ 0.12
NSMCE1-209ENST00000565384 SRP68Q9UHB9 627 aaKnown RBP15.81■□□□□ 0.12
NSMCE1-209ENST00000565384 SCN11AQ9UI33 1791 aa15.81■□□□□ 0.12
NSMCE1-209ENST00000565384 FKBP8Q14318 412 aa15.8■□□□□ 0.12
NSMCE1-209ENST00000565384 KCNA3P22001 575 aa15.79■□□□□ 0.12
NSMCE1-209ENST00000565384 AKAP4Q5JQC9 854 aa15.79■□□□□ 0.12
NSMCE1-209ENST00000565384 DDR1Q08345 913 aa15.78■□□□□ 0.12
NSMCE1-209ENST00000565384 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
NSMCE1-209ENST00000565384 IFFO2Q5TF58 517 aa15.78■□□□□ 0.12
NSMCE1-209ENST00000565384 INTS5Q6P9B9 1019 aaKnown RBP15.78■□□□□ 0.12
NSMCE1-209ENST00000565384 ADAMTS7Q9UKP4 1686 aa15.78■□□□□ 0.12
NSMCE1-209ENST00000565384 MRC1P22897 1456 aa15.78■□□□□ 0.12
NSMCE1-209ENST00000565384 DNAJC10Q8IXB1 793 aa15.77■□□□□ 0.12
NSMCE1-209ENST00000565384 SLC52A2Q9HAB3 445 aa15.77■□□□□ 0.12
NSMCE1-209ENST00000565384 PIM2Q9P1W9 311 aa15.77■□□□□ 0.12
NSMCE1-209ENST00000565384 ARFGEF1Q9Y6D6 1849 aa15.77■□□□□ 0.11
NSMCE1-209ENST00000565384 CCER1Q8TC90 406 aaPredicted RBP15.76■□□□□ 0.11
NSMCE1-209ENST00000565384 LGR6Q9HBX8 967 aa15.76■□□□□ 0.11
NSMCE1-209ENST00000565384 SOS1Q07889 1333 aaPredicted RBP15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 TOMM70O94826 608 aa15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 HMOX1P09601 288 aa15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 DALRD3Q5D0E6 543 aaKnown RBP15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 C9orf131Q5VYM1 1079 aa15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 USPL1Q5W0Q7 1092 aa15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 NMRK2Q9NPI5 230 aa15.75■□□□□ 0.11
NSMCE1-209ENST00000565384 KCPQ6ZWJ8 1503 aa15.74■□□□□ 0.11
NSMCE1-209ENST00000565384 KIF7Q2M1P5 1343 aa15.74■□□□□ 0.11
NSMCE1-209ENST00000565384 RNMTO43148 476 aaKnown RBP15.74■□□□□ 0.11
NSMCE1-209ENST00000565384 CHRNA5P30532 468 aa15.74■□□□□ 0.11
NSMCE1-209ENST00000565384 SLC39A6Q13433 755 aa15.74■□□□□ 0.11
NSMCE1-209ENST00000565384 ZPR1O75312 459 aa15.73■□□□□ 0.11
NSMCE1-209ENST00000565384 TM4SF1P30408 202 aa15.73■□□□□ 0.11
NSMCE1-209ENST00000565384 APLP1P51693 650 aa15.73■□□□□ 0.11
NSMCE1-209ENST00000565384 CEP350Q5VT06 3117 aa15.73■□□□□ 0.11
NSMCE1-209ENST00000565384 CYP19A1P11511 503 aaPredicted RBP15.72■□□□□ 0.11
NSMCE1-209ENST00000565384 MTHFSDQ2M296 383 aaKnown RBP15.72■□□□□ 0.11
NSMCE1-209ENST00000565384 ZBTB1Q9Y2K1 713 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms