RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 CCDC184Q52MB2 194 aa34.43■■■■□ 3.1
NME3-208ENST00000565379 RSPH6AQ9H0K4 717 aa34.42■■■■□ 3.1
NME3-208ENST00000565379 TAF1LQ8IZX4 1826 aa34.41■■■■□ 3.1
NME3-208ENST00000565379 PLEKHO1Q53GL0 409 aaPredicted RBP34.4■■■■□ 3.1
NME3-208ENST00000565379 PNISRQ8TF01 805 aaKnown RBP34.4■■■■□ 3.1
NME3-208ENST00000565379 ASAP1Q9ULH1 1129 aa34.4■■■■□ 3.1
NME3-208ENST00000565379 NEFMP07197 916 aa34.39■■■■□ 3.1
NME3-208ENST00000565379 ZNF530Q6P9A1 599 aaPredicted RBP34.39■■■■□ 3.1
NME3-208ENST00000565379 TMOD3Q9NYL9 352 aa34.39■■■■□ 3.1
NME3-208ENST00000565379 SMIM5Q71RC9 77 aa34.38■■■■□ 3.09
NME3-208ENST00000565379 AMIGO3Q86WK7 504 aa34.38■■■■□ 3.09
NME3-208ENST00000565379 COL23A1Q86Y22 540 aaPredicted RBP34.38■■■■□ 3.09
NME3-208ENST00000565379 KDM6AO15550 1401 aaPredicted RBP34.38■■■■□ 3.09
NME3-208ENST00000565379 PRKAR2BP31323 418 aa34.37■■■■□ 3.09
NME3-208ENST00000565379 SMARCC1Q92922 1105 aaPredicted RBP34.37■■■■□ 3.09
NME3-208ENST00000565379 MAP3K5Q99683 1374 aa34.36■■■■□ 3.09
NME3-208ENST00000565379 ADAMTS8Q9UP79 889 aa34.36■■■■□ 3.09
NME3-208ENST00000565379 C4BP0C0L5 1744 aa34.34■■■■□ 3.09
NME3-208ENST00000565379 ATG3Q9NT62 314 aa34.34■■■■□ 3.09
NME3-208ENST00000565379 COL24A1Q17RW2 1714 aa34.33■■■■□ 3.09
NME3-208ENST00000565379 MSH5O43196 834 aa34.33■■■■□ 3.09
NME3-208ENST00000565379 LOC102724428A0A0B4J2F2 783 aa34.32■■■■□ 3.08
NME3-208ENST00000565379 POLD1P28340 1107 aa34.32■■■■□ 3.08
NME3-208ENST00000565379 SIK1P57059 783 aa34.32■■■■□ 3.08
NME3-208ENST00000565379 LINC00116Q8NCU8 138 aa34.32■■■■□ 3.08
NME3-208ENST00000565379 ITPK1Q13572 414 aa34.31■■■■□ 3.08
NME3-208ENST00000565379 MSL1Q68DK7 614 aa34.31■■■■□ 3.08
NME3-208ENST00000565379 GAS2L2Q8NHY3 880 aa34.3■■■■□ 3.08
NME3-208ENST00000565379 PLEKHF1Q96S99 279 aa34.3■■■■□ 3.08
NME3-208ENST00000565379 MAPK8IP3Q9UPT6 1336 aa34.3■■■■□ 3.08
NME3-208ENST00000565379 DCAF5Q96JK2 942 aa34.28■■■■□ 3.08
NME3-208ENST00000565379 RUNDC1Q96C34 613 aa34.27■■■■□ 3.08
NME3-208ENST00000565379 HMGB2P26583 209 aaKnown RBP34.26■■■■□ 3.08
NME3-208ENST00000565379 SLC4A9Q96Q91 983 aa34.26■■■■□ 3.08
NME3-208ENST00000565379 UBR3Q6ZT12 1888 aa34.25■■■■□ 3.07
NME3-208ENST00000565379 ERVV-2B6SEH9 535 aa34.25■■■■□ 3.07
NME3-208ENST00000565379 HSP90AB1P08238 724 aaKnown RBP34.25■■■■□ 3.07
NME3-208ENST00000565379 C1orf141Q5JVX7 400 aa34.25■■■■□ 3.07
NME3-208ENST00000565379 KLHL34Q8N239 644 aa34.25■■■■□ 3.07
NME3-208ENST00000565379 AK7Q96M32 723 aa34.25■■■■□ 3.07
NME3-208ENST00000565379 PHF14O94880 888 aa34.24■■■■□ 3.07
NME3-208ENST00000565379 MTHFSDQ2M296 383 aaKnown RBP34.24■■■■□ 3.07
NME3-208ENST00000565379 ZNF784Q8NCA9 323 aaPredicted RBP34.24■■■■□ 3.07
NME3-208ENST00000565379 PHACTR3Q96KR7 559 aa34.24■■■■□ 3.07
NME3-208ENST00000565379 AKAP4Q5JQC9 854 aa34.23■■■■□ 3.07
NME3-208ENST00000565379 CHD4Q14839 1912 aa34.23■■■■□ 3.07
NME3-208ENST00000565379 UTRNP46939 3433 aa34.23■■■■□ 3.07
NME3-208ENST00000565379 ATP6V1AP38606 617 aa34.22■■■■□ 3.07
NME3-208ENST00000565379 GPR162Q16538 588 aa34.22■■■■□ 3.07
NME3-208ENST00000565379 FAM9BQ8IZU0 186 aa34.22■■■■□ 3.07
NME3-208ENST00000565379 CABP4P57796 275 aa34.21■■■■□ 3.07
NME3-208ENST00000565379 RBM42Q9BTD8 480 aaKnown RBP34.19■■■■□ 3.06
NME3-208ENST00000565379 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.18■■■■□ 3.06
NME3-208ENST00000565379 NFE2L2Q16236 605 aa34.17■■■■□ 3.06
NME3-208ENST00000565379 CCDC146Q8IYE0 955 aa34.17■■■■□ 3.06
NME3-208ENST00000565379 NLGN2Q8NFZ4 835 aa34.17■■■■□ 3.06
NME3-208ENST00000565379 NFATC2IPQ8NCF5 419 aa34.16■■■■□ 3.06
NME3-208ENST00000565379 SCN11AQ9UI33 1791 aa34.16■■■■□ 3.06
NME3-208ENST00000565379 GNAT3A8MTJ3 354 aa34.15■■■■□ 3.06
NME3-208ENST00000565379 GNPATO15228 680 aa34.15■■■■□ 3.06
NME3-208ENST00000565379 HTATSF1O43719 755 aaKnown RBP34.15■■■■□ 3.06
NME3-208ENST00000565379 LGR6Q9HBX8 967 aa34.15■■■■□ 3.06
NME3-208ENST00000565379 FLAD1Q8NFF5 587 aa34.14■■■■□ 3.06
NME3-208ENST00000565379 GOLGB1Q14789 3259 aaKnown RBP34.14■■■■□ 3.06
NME3-208ENST00000565379 PTCD1O75127 700 aaKnown RBP34.11■■■■□ 3.05
NME3-208ENST00000565379 TMPOP42166 694 aaKnown RBP34.11■■■■□ 3.05
NME3-208ENST00000565379 SSFA2P28290 1259 aa34.1■■■■□ 3.05
NME3-208ENST00000565379 LMOD3Q0VAK6 560 aa34.1■■■■□ 3.05
NME3-208ENST00000565379 RTF1Q92541 710 aaKnown RBP34.1■■■■□ 3.05
NME3-208ENST00000565379 COL5A3P25940 1745 aaPredicted RBP34.1■■■■□ 3.05
NME3-208ENST00000565379 NCBP3Q53F19 620 aaKnown RBP34.09■■■■□ 3.05
NME3-208ENST00000565379 PELP1Q8IZL8 1130 aaKnown RBP34.08■■■■□ 3.05
NME3-208ENST00000565379 ZNF831Q5JPB2 1677 aa34.08■■■■□ 3.05
NME3-208ENST00000565379 RNMTO43148 476 aaKnown RBP34.07■■■■□ 3.04
NME3-208ENST00000565379 RIPK4P57078 832 aa34.07■■■■□ 3.04
NME3-208ENST00000565379 MYH14Q7Z406 1995 aaKnown RBP34.07■■■■□ 3.04
NME3-208ENST00000565379 VIRMAQ69YN4 1812 aaKnown RBP34.07■■■■□ 3.04
NME3-208ENST00000565379 APAF1O14727 1248 aa34.06■■■■□ 3.04
NME3-208ENST00000565379 NGEFQ8N5V2 710 aa34.06■■■■□ 3.04
NME3-208ENST00000565379 MRC1P22897 1456 aa34.06■■■■□ 3.04
NME3-208ENST00000565379 SLC52A2Q9HAB3 445 aa34.05■■■■□ 3.04
NME3-208ENST00000565379 TJP1Q07157 1748 aa34.04■■■■□ 3.04
NME3-208ENST00000565379 ADAMTS7Q9UKP4 1686 aa34.03■■■■□ 3.04
NME3-208ENST00000565379 SLC39A6Q13433 755 aa34.03■■■■□ 3.04
NME3-208ENST00000565379 GRIN3BO60391 1043 aa34.01■■■■□ 3.03
NME3-208ENST00000565379 CNTNAP4Q9C0A0 1308 aa34.01■■■■□ 3.03
NME3-208ENST00000565379 CEMIPQ8WUJ3 1361 aa33.99■■■■□ 3.03
NME3-208ENST00000565379 NEUROD2Q15784 382 aa33.99■■■■□ 3.03
NME3-208ENST00000565379 IL17REQ8NFR9 667 aa33.99■■■■□ 3.03
NME3-208ENST00000565379 RTCBQ9Y3I0 505 aaKnown RBP33.99■■■■□ 3.03
NME3-208ENST00000565379 CD2APQ9Y5K6 639 aa33.99■■■■□ 3.03
NME3-208ENST00000565379 CCDC27Q2M243 656 aa33.98■■■■□ 3.03
NME3-208ENST00000565379 RC3H1Q5TC82 1133 aaKnown RBP33.98■■■■□ 3.03
NME3-208ENST00000565379 RRP7AQ9Y3A4 280 aaKnown RBP33.98■■■■□ 3.03
NME3-208ENST00000565379 CRKLP46109 303 aaKnown RBP33.97■■■■□ 3.03
NME3-208ENST00000565379 ARHGEF1Q92888 912 aaKnown RBP33.97■■■■□ 3.03
NME3-208ENST00000565379 KCPQ6ZWJ8 1503 aa33.96■■■■□ 3.03
NME3-208ENST00000565379 TEFQ10587 303 aa33.96■■■■□ 3.03
NME3-208ENST00000565379 RPS6KA4O75676 772 aa33.95■■■■□ 3.03
NME3-208ENST00000565379 YBX3P16989 372 aaKnown RBP eCLIP33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms