RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 THUMPD2Q9BTF0 503 aaKnown RBP18.29■□□□□ 0.52
CCNDBP1-206ENST00000565296 SCN11AQ9UI33 1791 aa18.29■□□□□ 0.52
CCNDBP1-206ENST00000565296 PLSCR1O15162 318 aa18.28■□□□□ 0.52
CCNDBP1-206ENST00000565296 CAMKK2Q96RR4 588 aa18.28■□□□□ 0.52
CCNDBP1-206ENST00000565296 ASAP1Q9ULH1 1129 aa18.28■□□□□ 0.52
CCNDBP1-206ENST00000565296 BTAF1O14981 1849 aa18.28■□□□□ 0.52
CCNDBP1-206ENST00000565296 PROM2Q8N271 834 aa18.28■□□□□ 0.52
CCNDBP1-206ENST00000565296 BAG6P46379 1132 aa18.27■□□□□ 0.52
CCNDBP1-206ENST00000565296 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
CCNDBP1-206ENST00000565296 ITGB4P16144 1822 aa18.27■□□□□ 0.52
CCNDBP1-206ENST00000565296 EZH2Q15910 746 aaKnown RBP18.26■□□□□ 0.51
CCNDBP1-206ENST00000565296 DLG5Q8TDM6 1919 aa18.25■□□□□ 0.51
CCNDBP1-206ENST00000565296 TEFQ10587 303 aa18.25■□□□□ 0.51
CCNDBP1-206ENST00000565296 PALLDQ8WX93 1383 aa18.24■□□□□ 0.51
CCNDBP1-206ENST00000565296 LMOD3Q0VAK6 560 aa18.23■□□□□ 0.51
CCNDBP1-206ENST00000565296 KAT6BQ8WYB5 2073 aa18.23■□□□□ 0.51
CCNDBP1-206ENST00000565296 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
CCNDBP1-206ENST00000565296 TXNRD1Q16881 649 aa18.22■□□□□ 0.51
CCNDBP1-206ENST00000565296 LRRC4BQ9NT99 713 aa18.22■□□□□ 0.51
CCNDBP1-206ENST00000565296 KCNQ4P56696 695 aa18.21■□□□□ 0.51
CCNDBP1-206ENST00000565296 SMARCC1Q92922 1105 aaPredicted RBP18.21■□□□□ 0.51
CCNDBP1-206ENST00000565296 SIPA1L3O60292 1781 aaPredicted RBP18.21■□□□□ 0.51
CCNDBP1-206ENST00000565296 TAF7Q15545 349 aaPredicted RBP18.21■□□□□ 0.51
CCNDBP1-206ENST00000565296 SLC4A9Q96Q91 983 aa18.21■□□□□ 0.51
CCNDBP1-206ENST00000565296 MIS18AQ9NYP9 233 aa18.21■□□□□ 0.51
CCNDBP1-206ENST00000565296 VIRMAQ69YN4 1812 aaKnown RBP18.21■□□□□ 0.5
CCNDBP1-206ENST00000565296 BTBD11A6QL63 1104 aa18.2■□□□□ 0.5
CCNDBP1-206ENST00000565296 KCNQ3O43525 872 aa18.2■□□□□ 0.5
CCNDBP1-206ENST00000565296 CCDC27Q2M243 656 aa18.2■□□□□ 0.5
CCNDBP1-206ENST00000565296 NCBP3Q53F19 620 aaKnown RBP18.2■□□□□ 0.5
CCNDBP1-206ENST00000565296 RGPD3A6NKT7 1758 aaPredicted RBP18.2■□□□□ 0.5
CCNDBP1-206ENST00000565296 RGPD4Q7Z3J3 1758 aa18.2■□□□□ 0.5
CCNDBP1-206ENST00000565296 WWC1Q8IX03 1113 aa18.19■□□□□ 0.5
CCNDBP1-206ENST00000565296 SALL2Q9Y467 1007 aaPredicted RBP18.19■□□□□ 0.5
CCNDBP1-206ENST00000565296 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
CCNDBP1-206ENST00000565296 PTCD1O75127 700 aaKnown RBP18.19■□□□□ 0.5
CCNDBP1-206ENST00000565296 SIK1P57059 783 aa18.19■□□□□ 0.5
CCNDBP1-206ENST00000565296 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
CCNDBP1-206ENST00000565296 PAPPAQ13219 1627 aa18.18■□□□□ 0.5
CCNDBP1-206ENST00000565296 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
CCNDBP1-206ENST00000565296 LY75O60449 1722 aa18.17■□□□□ 0.5
CCNDBP1-206ENST00000565296 SLC27A3Q5K4L6 730 aa18.17■□□□□ 0.5
CCNDBP1-206ENST00000565296 KCPQ6ZWJ8 1503 aa18.17■□□□□ 0.5
CCNDBP1-206ENST00000565296 ITPK1Q13572 414 aa18.16■□□□□ 0.5
CCNDBP1-206ENST00000565296 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
CCNDBP1-206ENST00000565296 RBM42Q9BTD8 480 aaKnown RBP18.16■□□□□ 0.5
CCNDBP1-206ENST00000565296 RREB1Q92766 1687 aa18.16■□□□□ 0.5
CCNDBP1-206ENST00000565296 CHL1O00533 1208 aa18.15■□□□□ 0.5
CCNDBP1-206ENST00000565296 ZNF853P0CG23 659 aa18.14■□□□□ 0.5
CCNDBP1-206ENST00000565296 TTC5Q8N0Z6 440 aa18.14■□□□□ 0.5
CCNDBP1-206ENST00000565296 ZNF521Q96K83 1311 aa18.14■□□□□ 0.49
CCNDBP1-206ENST00000565296 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
CCNDBP1-206ENST00000565296 NGEFQ8N5V2 710 aa18.14■□□□□ 0.49
CCNDBP1-206ENST00000565296 SUPT16HQ9Y5B9 1047 aaKnown RBP18.14■□□□□ 0.49
CCNDBP1-206ENST00000565296 CFAP44Q96MT7 982 aa18.13■□□□□ 0.49
CCNDBP1-206ENST00000565296 ANO8Q9HCE9 1232 aaPredicted RBP18.13■□□□□ 0.49
CCNDBP1-206ENST00000565296 BABAM1Q9NWV8 329 aa18.13■□□□□ 0.49
CCNDBP1-206ENST00000565296 TSPYL4Q9UJ04 414 aa18.13■□□□□ 0.49
CCNDBP1-206ENST00000565296 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
CCNDBP1-206ENST00000565296 NUP188Q5SRE5 1749 aa18.12■□□□□ 0.49
CCNDBP1-206ENST00000565296 LINC00116Q8NCU8 138 aa18.12■□□□□ 0.49
CCNDBP1-206ENST00000565296 LAS1LQ9Y4W2 734 aaKnown RBP18.12■□□□□ 0.49
CCNDBP1-206ENST00000565296 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
CCNDBP1-206ENST00000565296 EIF4A1P60842 406 aaKnown RBP18.11■□□□□ 0.49
CCNDBP1-206ENST00000565296 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
CCNDBP1-206ENST00000565296 WDR63Q8IWG1 891 aa18.11■□□□□ 0.49
CCNDBP1-206ENST00000565296 VSIG10Q8N0Z9 540 aa18.11■□□□□ 0.49
CCNDBP1-206ENST00000565296 FMNL2Q96PY5 1086 aa18.11■□□□□ 0.49
CCNDBP1-206ENST00000565296 MBIPQ9NS73 344 aa18.11■□□□□ 0.49
CCNDBP1-206ENST00000565296 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
CCNDBP1-206ENST00000565296 PRAMEF22A3QJZ6 481 aa18.1■□□□□ 0.49
CCNDBP1-206ENST00000565296 ZNF827Q17R98 1081 aa18.1■□□□□ 0.49
CCNDBP1-206ENST00000565296 DNAJC10Q8IXB1 793 aa18.1■□□□□ 0.49
CCNDBP1-206ENST00000565296 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
CCNDBP1-206ENST00000565296 KDM3BQ7LBC6 1761 aa18.1■□□□□ 0.49
CCNDBP1-206ENST00000565296 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
CCNDBP1-206ENST00000565296 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
CCNDBP1-206ENST00000565296 IL16Q14005 1332 aa18.09■□□□□ 0.49
CCNDBP1-206ENST00000565296 GNAI1P63096 354 aa18.09■□□□□ 0.49
CCNDBP1-206ENST00000565296 KRT24Q2M2I5 525 aa18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 TJP1Q07157 1748 aa18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 CICQ96RK0 1608 aaPredicted RBP18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 GIGYF1O75420 1035 aaPredicted RBP18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 CYP19A1P11511 503 aaPredicted RBP18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 SLC15A2Q16348 729 aa18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 TSR2Q969E8 191 aaKnown RBP18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 C5P01031 1676 aa18.07■□□□□ 0.48
CCNDBP1-206ENST00000565296 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
CCNDBP1-206ENST00000565296 HNRNPUQ00839 825 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCNDBP1-206ENST00000565296 USP16Q9Y5T5 823 aa18.06■□□□□ 0.48
CCNDBP1-206ENST00000565296 NBPF14Q5TI25 921 aa18.05■□□□□ 0.48
CCNDBP1-206ENST00000565296 INTS5Q6P9B9 1019 aaKnown RBP18.05■□□□□ 0.48
CCNDBP1-206ENST00000565296 C4BP0C0L5 1744 aa18.05■□□□□ 0.48
CCNDBP1-206ENST00000565296 CRKLP46109 303 aaKnown RBP18.05■□□□□ 0.48
CCNDBP1-206ENST00000565296 STK32BQ9NY57 414 aa18.05■□□□□ 0.48
CCNDBP1-206ENST00000565296 TAF1LQ8IZX4 1826 aa18.04■□□□□ 0.48
CCNDBP1-206ENST00000565296 SRCAPQ6ZRS2 3230 aa18.04■□□□□ 0.48
CCNDBP1-206ENST00000565296 CNTNAP4Q9C0A0 1308 aa18.04■□□□□ 0.48
CCNDBP1-206ENST00000565296 R3HDM1Q15032 1099 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms