RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
THUMPD1-203ENST00000565248 NEUROD2Q15784 382 aa21.43■■□□□ 1.02
THUMPD1-203ENST00000565248 AEBP1Q8IUX7 1158 aa21.43■■□□□ 1.02
THUMPD1-203ENST00000565248 LMOD3Q0VAK6 560 aa21.42■■□□□ 1.02
THUMPD1-203ENST00000565248 NFE2L2Q16236 605 aa21.42■■□□□ 1.02
THUMPD1-203ENST00000565248 COL24A1Q17RW2 1714 aa21.42■■□□□ 1.02
THUMPD1-203ENST00000565248 PNPLA7Q6ZV29 1317 aa21.42■■□□□ 1.02
THUMPD1-203ENST00000565248 RRP7AQ9Y3A4 280 aaKnown RBP21.42■■□□□ 1.02
THUMPD1-203ENST00000565248 GOLGA2Q08379 1002 aa21.41■■□□□ 1.02
THUMPD1-203ENST00000565248 SYTL4Q96C24 671 aaPredicted RBP21.41■■□□□ 1.02
THUMPD1-203ENST00000565248 FAM208AQ9UK61 1670 aaKnown RBP21.4■■□□□ 1.02
THUMPD1-203ENST00000565248 RIPK4P57078 832 aa21.4■■□□□ 1.02
THUMPD1-203ENST00000565248 NBPF6Q5VWK0 638 aa21.4■■□□□ 1.02
THUMPD1-203ENST00000565248 NBPF4Q96M43 638 aa21.4■■□□□ 1.02
THUMPD1-203ENST00000565248 ZNF521Q96K83 1311 aa21.39■■□□□ 1.01
THUMPD1-203ENST00000565248 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.01
THUMPD1-203ENST00000565248 WWC1Q8IX03 1113 aa21.39■■□□□ 1.01
THUMPD1-203ENST00000565248 PRIM1P49642 420 aaKnown RBP21.38■■□□□ 1.01
THUMPD1-203ENST00000565248 NLGN2Q8NFZ4 835 aa21.38■■□□□ 1.01
THUMPD1-203ENST00000565248 GAS2L2Q8NHY3 880 aa21.38■■□□□ 1.01
THUMPD1-203ENST00000565248 PHACTR3Q96KR7 559 aa21.38■■□□□ 1.01
THUMPD1-203ENST00000565248 TUBGCP6Q96RT7 1819 aa21.37■■□□□ 1.01
THUMPD1-203ENST00000565248 CEP350Q5VT06 3117 aa21.37■■□□□ 1.01
THUMPD1-203ENST00000565248 CALD1Q05682 793 aaKnown RBP21.37■■□□□ 1.01
THUMPD1-203ENST00000565248 WDR63Q8IWG1 891 aa21.37■■□□□ 1.01
THUMPD1-203ENST00000565248 USHBP1Q8N6Y0 703 aa21.37■■□□□ 1.01
THUMPD1-203ENST00000565248 NCAPD2Q15021 1401 aa21.37■■□□□ 1.01
THUMPD1-203ENST00000565248 SHANK3Q9BYB0 1731 aa21.36■■□□□ 1.01
THUMPD1-203ENST00000565248 E9PSI1 815 aa21.35■■□□□ 1.01
THUMPD1-203ENST00000565248 HMGB2P26583 209 aaKnown RBP21.35■■□□□ 1.01
THUMPD1-203ENST00000565248 KCNQ4P56696 695 aa21.35■■□□□ 1.01
THUMPD1-203ENST00000565248 LY75O60449 1722 aa21.35■■□□□ 1.01
THUMPD1-203ENST00000565248 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
THUMPD1-203ENST00000565248 CCNL1Q9UK58 526 aaPredicted RBP21.34■■□□□ 1.01
THUMPD1-203ENST00000565248 PLEKHG2Q9H7P9 1386 aa21.33■■□□□ 1
THUMPD1-203ENST00000565248 DOT1LQ8TEK3 1739 aa21.32■■□□□ 1
THUMPD1-203ENST00000565248 YBX3P16989 372 aaKnown RBP eCLIP21.32■■□□□ 12e-8■□□□□ 8.6
THUMPD1-203ENST00000565248 AMOTQ4VCS5 1084 aa21.32■■□□□ 1
THUMPD1-203ENST00000565248 PLEKHO1Q53GL0 409 aaPredicted RBP21.32■■□□□ 1
THUMPD1-203ENST00000565248 ZCRB1Q8TBF4 217 aaKnown RBP21.32■■□□□ 1
THUMPD1-203ENST00000565248 IL16Q14005 1332 aa21.31■■□□□ 1
THUMPD1-203ENST00000565248 TRIM35Q9UPQ4 493 aa21.31■■□□□ 1
THUMPD1-203ENST00000565248 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
THUMPD1-203ENST00000565248 SLFN5Q08AF3 891 aa21.3■■□□□ 1
THUMPD1-203ENST00000565248 MTHFSDQ2M296 383 aaKnown RBP21.3■■□□□ 1
THUMPD1-203ENST00000565248 RTF1Q92541 710 aaKnown RBP21.3■■□□□ 1
THUMPD1-203ENST00000565248 CDCA7LQ96GN5 454 aa21.3■■□□□ 1
THUMPD1-203ENST00000565248 MYH16Q9H6N6 1097 aa21.3■■□□□ 1
THUMPD1-203ENST00000565248 RGPD2P0DJD1 1756 aa21.3■■□□□ 1
THUMPD1-203ENST00000565248 HTATSF1O43719 755 aaKnown RBP21.29■■□□□ 1
THUMPD1-203ENST00000565248 COL23A1Q86Y22 540 aaPredicted RBP21.29■■□□□ 1
THUMPD1-203ENST00000565248 GPBP1L1Q9HC44 474 aaPredicted RBP21.29■■□□□ 1
THUMPD1-203ENST00000565248 FLAD1Q8NFF5 587 aa21.27■■□□□ 1
THUMPD1-203ENST00000565248 CD2APQ9Y5K6 639 aa21.27■■□□□ 1
THUMPD1-203ENST00000565248 ATP10DQ9P241 1426 aa21.27■■□□□ 1
THUMPD1-203ENST00000565248 GNAT3A8MTJ3 354 aa21.26■□□□□ 0.99
THUMPD1-203ENST00000565248 SPG7Q9UQ90 795 aa21.26■□□□□ 0.99
THUMPD1-203ENST00000565248 C1orf141Q5JVX7 400 aa21.25■□□□□ 0.99
THUMPD1-203ENST00000565248 MSL1Q68DK7 614 aa21.25■□□□□ 0.99
THUMPD1-203ENST00000565248 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.25■□□□□ 0.991e-7■■□□□ 13.1
THUMPD1-203ENST00000565248 DUSP27Q5VZP5 1158 aa21.24■□□□□ 0.99
THUMPD1-203ENST00000565248 ZNF530Q6P9A1 599 aaPredicted RBP21.24■□□□□ 0.99
THUMPD1-203ENST00000565248 TRMT2AQ8IZ69 625 aaKnown RBP21.24■□□□□ 0.99
THUMPD1-203ENST00000565248 GNAI1P63096 354 aa21.23■□□□□ 0.99
THUMPD1-203ENST00000565248 DLG5Q8TDM6 1919 aa21.22■□□□□ 0.99
THUMPD1-203ENST00000565248 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
THUMPD1-203ENST00000565248 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
THUMPD1-203ENST00000565248 C5P01031 1676 aa21.21■□□□□ 0.99
THUMPD1-203ENST00000565248 HSPA6P17066 643 aa21.21■□□□□ 0.99
THUMPD1-203ENST00000565248 MEGF6O75095 1541 aa21.2■□□□□ 0.98
THUMPD1-203ENST00000565248 SPINK5Q9NQ38 1064 aaPredicted RBP21.2■□□□□ 0.98
THUMPD1-203ENST00000565248 ZNF526Q8TF50 670 aaPredicted RBP21.19■□□□□ 0.98
THUMPD1-203ENST00000565248 THUMPD2Q9BTF0 503 aaKnown RBP21.19■□□□□ 0.98
THUMPD1-203ENST00000565248 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
THUMPD1-203ENST00000565248 DCTN1Q14203 1278 aa21.18■□□□□ 0.98
THUMPD1-203ENST00000565248 MCM10Q7L590 875 aa21.18■□□□□ 0.98
THUMPD1-203ENST00000565248 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
THUMPD1-203ENST00000565248 RCAN3Q9UKA8 241 aa21.18■□□□□ 0.98
THUMPD1-203ENST00000565248 FANCIQ9NVI1 1328 aa21.17■□□□□ 0.98
THUMPD1-203ENST00000565248 PCDH11XQ9BZA7 1347 aa21.16■□□□□ 0.98
THUMPD1-203ENST00000565248 PCDH11YQ9BZA8 1340 aa21.16■□□□□ 0.98
THUMPD1-203ENST00000565248 NEFLP07196 543 aa21.16■□□□□ 0.98
THUMPD1-203ENST00000565248 HSP90AB1P08238 724 aaKnown RBP21.16■□□□□ 0.98
THUMPD1-203ENST00000565248 IFNL2Q8IZJ0 200 aa21.16■□□□□ 0.98
THUMPD1-203ENST00000565248 AK7Q96M32 723 aa21.16■□□□□ 0.98
THUMPD1-203ENST00000565248 TAF1LQ8IZX4 1826 aa21.15■□□□□ 0.98
THUMPD1-203ENST00000565248 ADCY9O60503 1353 aa21.15■□□□□ 0.98
THUMPD1-203ENST00000565248 PALLDQ8WX93 1383 aa21.15■□□□□ 0.98
THUMPD1-203ENST00000565248 CT47B1P0C2W7 299 aaPredicted RBP21.15■□□□□ 0.98
THUMPD1-203ENST00000565248 ZNF853P0CG23 659 aa21.14■□□□□ 0.97
THUMPD1-203ENST00000565248 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
THUMPD1-203ENST00000565248 SMARCC1Q92922 1105 aaPredicted RBP21.14■□□□□ 0.97
THUMPD1-203ENST00000565248 TSR2Q969E8 191 aaKnown RBP21.14■□□□□ 0.97
THUMPD1-203ENST00000565248 PKD1L3Q7Z443 1732 aa21.14■□□□□ 0.97
THUMPD1-203ENST00000565248 TEFQ10587 303 aa21.13■□□□□ 0.97
THUMPD1-203ENST00000565248 BABAM1Q9NWV8 329 aa21.13■□□□□ 0.97
THUMPD1-203ENST00000565248 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
THUMPD1-203ENST00000565248 PHKG2P15735 406 aa21.12■□□□□ 0.97
THUMPD1-203ENST00000565248 IL17REQ8NFR9 667 aa21.12■□□□□ 0.97
THUMPD1-203ENST00000565248 CEMIPQ8WUJ3 1361 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms