RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 HOXB7P09629 217 aa24.86■■□□□ 1.57
CLN6-205ENST00000564846 EIF4A1P60842 406 aaKnown RBP24.86■■□□□ 1.57
CLN6-205ENST00000564846 LARP1Q6PKG0 1096 aaKnown RBP24.86■■□□□ 1.57
CLN6-205ENST00000564846 STK31Q9BXU1 1019 aa24.86■■□□□ 1.57
CLN6-205ENST00000564846 PARP4Q9UKK3 1724 aaKnown RBP24.86■■□□□ 1.57
CLN6-205ENST00000564846 PIP4K2BP78356 416 aa24.85■■□□□ 1.57
CLN6-205ENST00000564846 DCAF5Q96JK2 942 aa24.85■■□□□ 1.57
CLN6-205ENST00000564846 TSHZ2Q9NRE2 1034 aa24.85■■□□□ 1.57
CLN6-205ENST00000564846 BTG4Q9NY30 223 aa24.85■■□□□ 1.57
CLN6-205ENST00000564846 KDM6AO15550 1401 aaPredicted RBP24.84■■□□□ 1.57
CLN6-205ENST00000564846 CYP27B1O15528 508 aa24.84■■□□□ 1.57
CLN6-205ENST00000564846 IL2RBP14784 551 aa24.84■■□□□ 1.57
CLN6-205ENST00000564846 VIRMAQ69YN4 1812 aaKnown RBP24.83■■□□□ 1.57
CLN6-205ENST00000564846 SLC52A2Q9HAB3 445 aa24.82■■□□□ 1.56
CLN6-205ENST00000564846 PCDHB15Q9Y5E8 787 aa24.82■■□□□ 1.56
CLN6-205ENST00000564846 PCDH11XQ9BZA7 1347 aa24.82■■□□□ 1.56
CLN6-205ENST00000564846 PCDH11YQ9BZA8 1340 aa24.82■■□□□ 1.56
CLN6-205ENST00000564846 SIPA1L3O60292 1781 aaPredicted RBP24.82■■□□□ 1.56
CLN6-205ENST00000564846 UBAP1LF5GYI3 381 aa24.82■■□□□ 1.56
CLN6-205ENST00000564846 ZCRB1Q8TBF4 217 aaKnown RBP24.82■■□□□ 1.56
CLN6-205ENST00000564846 ZBTB40Q9NUA8 1239 aa24.82■■□□□ 1.56
CLN6-205ENST00000564846 SCN11AQ9UI33 1791 aa24.81■■□□□ 1.56
CLN6-205ENST00000564846 IGHDP01880 384 aa24.81■■□□□ 1.56
CLN6-205ENST00000564846 AEBP2Q6ZN18 517 aaPredicted RBP24.81■■□□□ 1.56
CLN6-205ENST00000564846 KCNQ3O43525 872 aa24.8■■□□□ 1.56
CLN6-205ENST00000564846 HDGFL1Q5TGJ6 251 aa24.8■■□□□ 1.56
CLN6-205ENST00000564846 RGS12O14924 1447 aa24.8■■□□□ 1.56
CLN6-205ENST00000564846 MRC1P22897 1456 aa24.79■■□□□ 1.56
CLN6-205ENST00000564846 RWDD1Q9H446 243 aaPredicted RBP24.79■■□□□ 1.56
CLN6-205ENST00000564846 ZBTB7BO15156 539 aaPredicted RBP24.78■■□□□ 1.56
CLN6-205ENST00000564846 INTS3Q68E01 1043 aaKnown RBP24.78■■□□□ 1.56
CLN6-205ENST00000564846 HEG1Q9ULI3 1381 aa24.78■■□□□ 1.56
CLN6-205ENST00000564846 NFATC2IPQ8NCF5 419 aa24.76■■□□□ 1.55
CLN6-205ENST00000564846 G2E3Q7L622 706 aa24.75■■□□□ 1.55
CLN6-205ENST00000564846 FLIIQ13045 1269 aa24.75■■□□□ 1.55
CLN6-205ENST00000564846 NKX1-1Q15270 411 aaPredicted RBP24.75■■□□□ 1.55
CLN6-205ENST00000564846 ZNF790Q6PG37 636 aa24.75■■□□□ 1.55
CLN6-205ENST00000564846 CACNA1FO60840 1977 aa24.74■■□□□ 1.55
CLN6-205ENST00000564846 GIGYF1O75420 1035 aaPredicted RBP24.74■■□□□ 1.55
CLN6-205ENST00000564846 HDAC1Q13547 482 aaPredicted RBP24.74■■□□□ 1.55
CLN6-205ENST00000564846 NECTIN2Q92692 538 aa24.74■■□□□ 1.55
CLN6-205ENST00000564846 USP35Q9P2H5 1018 aa24.72■■□□□ 1.55
CLN6-205ENST00000564846 ADAMTS2O95450 1211 aa24.72■■□□□ 1.55
CLN6-205ENST00000564846 EIF2S2P20042 333 aaKnown RBP24.72■■□□□ 1.55
CLN6-205ENST00000564846 CABP4P57796 275 aa24.72■■□□□ 1.55
CLN6-205ENST00000564846 ERVV-2B6SEH9 535 aa24.7■■□□□ 1.55
CLN6-205ENST00000564846 CCT4P50991 539 aaKnown RBP24.7■■□□□ 1.55
CLN6-205ENST00000564846 FKBP5Q13451 457 aaPredicted RBP24.7■■□□□ 1.54
CLN6-205ENST00000564846 DISP2A7MBM2 1401 aa24.69■■□□□ 1.54
CLN6-205ENST00000564846 DDX54Q8TDD1 881 aaKnown RBP24.69■■□□□ 1.54
CLN6-205ENST00000564846 PLCH1Q4KWH8 1693 aa24.69■■□□□ 1.54
CLN6-205ENST00000564846 SLC39A6Q13433 755 aa24.68■■□□□ 1.54
CLN6-205ENST00000564846 TTC5Q8N0Z6 440 aa24.68■■□□□ 1.54
CLN6-205ENST00000564846 DBF4Q9UBU7 674 aaPredicted RBP24.68■■□□□ 1.54
CLN6-205ENST00000564846 SHANK3Q9BYB0 1731 aa24.68■■□□□ 1.54
CLN6-205ENST00000564846 CERKQ8TCT0 537 aa24.67■■□□□ 1.54
CLN6-205ENST00000564846 CHPF2Q9P2E5 772 aa24.67■■□□□ 1.54
CLN6-205ENST00000564846 NUTM2BA6NNL0 878 aaPredicted RBP24.67■■□□□ 1.54
CLN6-205ENST00000564846 NUTM2EB1AL46 878 aaPredicted RBP24.67■■□□□ 1.54
CLN6-205ENST00000564846 NUTM2AQ8IVF1 878 aaPredicted RBP24.67■■□□□ 1.54
CLN6-205ENST00000564846 JCADQ9P266 1359 aa24.66■■□□□ 1.54
CLN6-205ENST00000564846 F6X3S4 739 aa24.65■■□□□ 1.54
CLN6-205ENST00000564846 SLC4A10Q6U841 1118 aa24.65■■□□□ 1.54
CLN6-205ENST00000564846 THRAP3Q9Y2W1 955 aaKnown RBP24.65■■□□□ 1.54
CLN6-205ENST00000564846 PXDNLA1KZ92 1463 aa24.64■■□□□ 1.54
CLN6-205ENST00000564846 ZNF496Q96IT1 587 aaPredicted RBP24.64■■□□□ 1.53
CLN6-205ENST00000564846 FMNL2Q96PY5 1086 aa24.64■■□□□ 1.53
CLN6-205ENST00000564846 CDCA7Q9BWT1 371 aaPredicted RBP24.64■■□□□ 1.53
CLN6-205ENST00000564846 PHAXQ9H814 394 aaKnown RBP24.64■■□□□ 1.53
CLN6-205ENST00000564846 SKAP1Q86WV1 359 aa24.63■■□□□ 1.53
CLN6-205ENST00000564846 NRAPQ86VF7 1730 aa24.63■■□□□ 1.53
CLN6-205ENST00000564846 SLIT2O94813 1529 aa24.62■■□□□ 1.53
CLN6-205ENST00000564846 PRAMEF22A3QJZ6 481 aa24.62■■□□□ 1.53
CLN6-205ENST00000564846 SNRPA1P09661 255 aaKnown RBP24.62■■□□□ 1.53
CLN6-205ENST00000564846 SMC5Q8IY18 1101 aa24.62■■□□□ 1.53
CLN6-205ENST00000564846 HYPKQ9NX55 129 aa24.62■■□□□ 1.53
CLN6-205ENST00000564846 SPATA31A1Q5TZJ5 1347 aa24.61■■□□□ 1.53
CLN6-205ENST00000564846 NWD2Q9ULI1 1742 aa24.61■■□□□ 1.53
CLN6-205ENST00000564846 C1orf115Q9H7X2 142 aa24.61■■□□□ 1.53
CLN6-205ENST00000564846 RBM19Q9Y4C8 960 aaKnown RBP24.6■■□□□ 1.53
CLN6-205ENST00000564846 EXOC5O00471 708 aa24.59■■□□□ 1.53
CLN6-205ENST00000564846 DDX21Q9NR30 783 aaKnown RBP eCLIP24.59■■□□□ 1.53
CLN6-205ENST00000564846 PDZRN3Q9UPQ7 1066 aa24.59■■□□□ 1.53
CLN6-205ENST00000564846 RGS3P49796 1198 aa24.58■■□□□ 1.53
CLN6-205ENST00000564846 MEIS3Q99687 375 aa24.58■■□□□ 1.53
CLN6-205ENST00000564846 RPAP2Q8IXW5 612 aaPredicted RBP24.57■■□□□ 1.52
CLN6-205ENST00000564846 WNK3Q9BYP7 1800 aa24.57■■□□□ 1.52
CLN6-205ENST00000564846 SPATA31A5Q5VU36 1347 aa24.57■■□□□ 1.52
CLN6-205ENST00000564846 SPATA31A7Q8IWB4 1347 aa24.57■■□□□ 1.52
CLN6-205ENST00000564846 C5P01031 1676 aa24.56■■□□□ 1.52
CLN6-205ENST00000564846 N4BP2Q86UW6 1770 aaPredicted RBP24.56■■□□□ 1.52
CLN6-205ENST00000564846 ANXA1P04083 346 aa24.56■■□□□ 1.52
CLN6-205ENST00000564846 GCC1Q96CN9 775 aa24.56■■□□□ 1.52
CLN6-205ENST00000564846 TMOD3Q9NYL9 352 aa24.56■■□□□ 1.52
CLN6-205ENST00000564846 SPATA31A6Q5VVP1 1343 aa24.56■■□□□ 1.52
CLN6-205ENST00000564846 TNS2Q63HR2 1409 aa24.56■■□□□ 1.52
CLN6-205ENST00000564846 PI4KAP2A4QPH2 592 aa24.55■■□□□ 1.52
CLN6-205ENST00000564846 GNAI3P08754 354 aa24.55■■□□□ 1.52
CLN6-205ENST00000564846 PDIA6Q15084 440 aa24.55■■□□□ 1.52
CLN6-205ENST00000564846 PROSER3Q2NL68 480 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms