RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
HERC2-206ENST00000564519 GRIN3BO60391 1043 aa17.13■□□□□ 0.33
HERC2-206ENST00000564519 GIGYF1O75420 1035 aaPredicted RBP17.13■□□□□ 0.33
HERC2-206ENST00000564519 ITPK1Q13572 414 aa17.13■□□□□ 0.33
HERC2-206ENST00000564519 C1orf141Q5JVX7 400 aa17.13■□□□□ 0.33
HERC2-206ENST00000564519 AMIGO3Q86WK7 504 aa17.13■□□□□ 0.33
HERC2-206ENST00000564519 SMIM5Q71RC9 77 aa17.12■□□□□ 0.33
HERC2-206ENST00000564519 LINC00116Q8NCU8 138 aa17.12■□□□□ 0.33
HERC2-206ENST00000564519 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
HERC2-206ENST00000564519 C5P01031 1676 aa17.11■□□□□ 0.33
HERC2-206ENST00000564519 U2SURPO15042 1029 aaKnown RBP17.11■□□□□ 0.33
HERC2-206ENST00000564519 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
HERC2-206ENST00000564519 CABP4P57796 275 aa17.11■□□□□ 0.33
HERC2-206ENST00000564519 MTHFSDQ2M296 383 aaKnown RBP17.11■□□□□ 0.33
HERC2-206ENST00000564519 MSL1Q68DK7 614 aa17.11■□□□□ 0.33
HERC2-206ENST00000564519 FLAD1Q8NFF5 587 aa17.11■□□□□ 0.33
HERC2-206ENST00000564519 SLC4A9Q96Q91 983 aa17.11■□□□□ 0.33
HERC2-206ENST00000564519 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
HERC2-206ENST00000564519 ATP6V1AP38606 617 aa17.1■□□□□ 0.33
HERC2-206ENST00000564519 QSER1Q2KHR3 1735 aa17.1■□□□□ 0.33
HERC2-206ENST00000564519 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
HERC2-206ENST00000564519 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
HERC2-206ENST00000564519 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
HERC2-206ENST00000564519 C4BP0C0L5 1744 aa17.08■□□□□ 0.32
HERC2-206ENST00000564519 AK7Q96M32 723 aa17.08■□□□□ 0.32
HERC2-206ENST00000564519 PHF14O94880 888 aa17.07■□□□□ 0.32
HERC2-206ENST00000564519 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
HERC2-206ENST00000564519 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
HERC2-206ENST00000564519 GOLGB1Q14789 3259 aaKnown RBP17.05■□□□□ 0.32
HERC2-206ENST00000564519 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.05■□□□□ 0.32
HERC2-206ENST00000564519 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
HERC2-206ENST00000564519 CFAP53Q96M91 514 aa17.05■□□□□ 0.32
HERC2-206ENST00000564519 CD2APQ9Y5K6 639 aa17.05■□□□□ 0.32
HERC2-206ENST00000564519 CHD4Q14839 1912 aa17.04■□□□□ 0.32
HERC2-206ENST00000564519 GNPATO15228 680 aa17.04■□□□□ 0.32
HERC2-206ENST00000564519 YBX3P16989 372 aaKnown RBP eCLIP17.04■□□□□ 0.32
HERC2-206ENST00000564519 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
HERC2-206ENST00000564519 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
HERC2-206ENST00000564519 PHACTR3Q96KR7 559 aa17.03■□□□□ 0.32
HERC2-206ENST00000564519 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
HERC2-206ENST00000564519 PRKAR2BP31323 418 aa17.02■□□□□ 0.32
HERC2-206ENST00000564519 COL24A1Q17RW2 1714 aa17.01■□□□□ 0.31
HERC2-206ENST00000564519 MRC1P22897 1456 aa17.01■□□□□ 0.31
HERC2-206ENST00000564519 SSFA2P28290 1259 aa17.01■□□□□ 0.31
HERC2-206ENST00000564519 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
HERC2-206ENST00000564519 U2AF1L5P0DN76 240 aaPredicted RBP17■□□□□ 0.31
HERC2-206ENST00000564519 U2AF1Q01081 240 aaKnown RBP eCLIP17■□□□□ 0.31
HERC2-206ENST00000564519 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
HERC2-206ENST00000564519 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
HERC2-206ENST00000564519 NUDCQ9Y266 331 aa17■□□□□ 0.31
HERC2-206ENST00000564519 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
HERC2-206ENST00000564519 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
HERC2-206ENST00000564519 UBR3Q6ZT12 1888 aa16.99■□□□□ 0.31
HERC2-206ENST00000564519 CNTNAP4Q9C0A0 1308 aa16.98■□□□□ 0.31
HERC2-206ENST00000564519 ADAMTS7Q9UKP4 1686 aa16.98■□□□□ 0.31
HERC2-206ENST00000564519 RC3H1Q5TC82 1133 aaKnown RBP16.98■□□□□ 0.31
HERC2-206ENST00000564519 GPBP1L1Q9HC44 474 aaPredicted RBP16.98■□□□□ 0.31
HERC2-206ENST00000564519 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
HERC2-206ENST00000564519 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
HERC2-206ENST00000564519 RTCBQ9Y3I0 505 aaKnown RBP16.97■□□□□ 0.31
HERC2-206ENST00000564519 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
HERC2-206ENST00000564519 TRAPPC3LQ5T215 181 aa16.96■□□□□ 0.31
HERC2-206ENST00000564519 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.3
HERC2-206ENST00000564519 ATP10DQ9P241 1426 aa16.96■□□□□ 0.3
HERC2-206ENST00000564519 RPS6KA4O75676 772 aa16.95■□□□□ 0.3
HERC2-206ENST00000564519 FCHSD2O94868 740 aa16.95■□□□□ 0.3
HERC2-206ENST00000564519 CRKLP46109 303 aaKnown RBP16.95■□□□□ 0.3
HERC2-206ENST00000564519 ZNF526Q8TF50 670 aaPredicted RBP16.95■□□□□ 0.3
HERC2-206ENST00000564519 ARHGEF1Q92888 912 aaKnown RBP16.95■□□□□ 0.3
HERC2-206ENST00000564519 WWC3Q9ULE0 1092 aa16.95■□□□□ 0.3
HERC2-206ENST00000564519 COL5A3P25940 1745 aaPredicted RBP16.95■□□□□ 0.3
HERC2-206ENST00000564519 TJP1Q07157 1748 aa16.94■□□□□ 0.3
HERC2-206ENST00000564519 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
HERC2-206ENST00000564519 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
HERC2-206ENST00000564519 ADRA2BP18089 450 aa16.92■□□□□ 0.3
HERC2-206ENST00000564519 TEFQ10587 303 aa16.92■□□□□ 0.3
HERC2-206ENST00000564519 KCNQ3O43525 872 aa16.91■□□□□ 0.3
HERC2-206ENST00000564519 CYP19A1P11511 503 aaPredicted RBP16.91■□□□□ 0.3
HERC2-206ENST00000564519 RALBP1Q15311 655 aa16.91■□□□□ 0.3
HERC2-206ENST00000564519 MCM10Q7L590 875 aa16.91■□□□□ 0.3
HERC2-206ENST00000564519 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
HERC2-206ENST00000564519 CICQ96RK0 1608 aaPredicted RBP16.91■□□□□ 0.3
HERC2-206ENST00000564519 MMP10P09238 476 aa16.9■□□□□ 0.3
HERC2-206ENST00000564519 GYS1P13807 737 aa16.9■□□□□ 0.3
HERC2-206ENST00000564519 RFC4P35249 363 aa16.9■□□□□ 0.3
HERC2-206ENST00000564519 DCTN1Q14203 1278 aa16.9■□□□□ 0.3
HERC2-206ENST00000564519 ZNF790Q6PG37 636 aa16.9■□□□□ 0.3
HERC2-206ENST00000564519 TTC5Q8N0Z6 440 aa16.9■□□□□ 0.3
HERC2-206ENST00000564519 ZNF496Q96IT1 587 aaPredicted RBP16.9■□□□□ 0.3
HERC2-206ENST00000564519 CCDC87Q9NVE4 849 aa16.9■□□□□ 0.3
HERC2-206ENST00000564519 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.3
HERC2-206ENST00000564519 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
HERC2-206ENST00000564519 PLEKHF1Q96S99 279 aa16.89■□□□□ 0.29
HERC2-206ENST00000564519 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
HERC2-206ENST00000564519 SOS1Q07889 1333 aaPredicted RBP16.88■□□□□ 0.29
HERC2-206ENST00000564519 VIRMAQ69YN4 1812 aaKnown RBP16.87■□□□□ 0.29
HERC2-206ENST00000564519 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
HERC2-206ENST00000564519 FKBP8Q14318 412 aa16.87■□□□□ 0.29
HERC2-206ENST00000564519 NLGN1Q8N2Q7 840 aa16.87■□□□□ 0.29
HERC2-206ENST00000564519 RTF1Q92541 710 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms