RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 LGR6Q9HBX8 967 aa22.66■■□□□ 1.22
CPNE7-207ENST00000564421 C5P01031 1676 aa22.65■■□□□ 1.22
CPNE7-207ENST00000564421 MAPK8IP3Q9UPT6 1336 aa22.65■■□□□ 1.22
CPNE7-207ENST00000564421 NBPF14Q5TI25 921 aa22.64■■□□□ 1.21
CPNE7-207ENST00000564421 CCDC146Q8IYE0 955 aa22.64■■□□□ 1.21
CPNE7-207ENST00000564421 SLC52A2Q9HAB3 445 aa22.64■■□□□ 1.21
CPNE7-207ENST00000564421 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
CPNE7-207ENST00000564421 NFATC2IPQ8NCF5 419 aa22.63■■□□□ 1.21
CPNE7-207ENST00000564421 CEMIPQ8WUJ3 1361 aa22.63■■□□□ 1.21
CPNE7-207ENST00000564421 QSER1Q2KHR3 1735 aa22.62■■□□□ 1.21
CPNE7-207ENST00000564421 HMGB2P26583 209 aaKnown RBP22.62■■□□□ 1.21
CPNE7-207ENST00000564421 IL17REQ8NFR9 667 aa22.62■■□□□ 1.21
CPNE7-207ENST00000564421 ATG3Q9NT62 314 aa22.62■■□□□ 1.21
CPNE7-207ENST00000564421 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
CPNE7-207ENST00000564421 UBR2Q8IWV8 1755 aa22.61■■□□□ 1.21
CPNE7-207ENST00000564421 NFE2L2Q16236 605 aa22.61■■□□□ 1.21
CPNE7-207ENST00000564421 RUNDC1Q96C34 613 aa22.61■■□□□ 1.21
CPNE7-207ENST00000564421 LRRC4BQ9NT99 713 aa22.61■■□□□ 1.21
CPNE7-207ENST00000564421 CCNL1Q9UK58 526 aaPredicted RBP22.61■■□□□ 1.21
CPNE7-207ENST00000564421 RTF1Q92541 710 aaKnown RBP22.6■■□□□ 1.21
CPNE7-207ENST00000564421 CICQ96RK0 1608 aaPredicted RBP22.6■■□□□ 1.21
CPNE7-207ENST00000564421 TUBGCP6Q96RT7 1819 aa22.59■■□□□ 1.21
CPNE7-207ENST00000564421 COL5A3P25940 1745 aaPredicted RBP22.58■■□□□ 1.21
CPNE7-207ENST00000564421 LOC102724428A0A0B4J2F2 783 aa22.57■■□□□ 1.2
CPNE7-207ENST00000564421 SIK1P57059 783 aa22.57■■□□□ 1.2
CPNE7-207ENST00000564421 TEFQ10587 303 aa22.57■■□□□ 1.2
CPNE7-207ENST00000564421 ANO8Q9HCE9 1232 aaPredicted RBP22.56■■□□□ 1.2
CPNE7-207ENST00000564421 STK32BQ9NY57 414 aa22.56■■□□□ 1.2
CPNE7-207ENST00000564421 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
CPNE7-207ENST00000564421 R3HDM1Q15032 1099 aaKnown RBP22.55■■□□□ 1.2
CPNE7-207ENST00000564421 SLC15A2Q16348 729 aa22.55■■□□□ 1.2
CPNE7-207ENST00000564421 TJP1Q07157 1748 aa22.54■■□□□ 1.2
CPNE7-207ENST00000564421 CASZ1Q86V15 1759 aa22.54■■□□□ 1.2
CPNE7-207ENST00000564421 APAF1O14727 1248 aa22.54■■□□□ 1.2
CPNE7-207ENST00000564421 TMPOP42166 694 aaKnown RBP22.54■■□□□ 1.2
CPNE7-207ENST00000564421 KCNQ4P56696 695 aa22.54■■□□□ 1.2
CPNE7-207ENST00000564421 MCM10Q7L590 875 aa22.54■■□□□ 1.2
CPNE7-207ENST00000564421 YTHDC1Q96MU7 727 aaKnown RBP22.54■■□□□ 1.2
CPNE7-207ENST00000564421 UBR3Q6ZT12 1888 aa22.54■■□□□ 1.2
CPNE7-207ENST00000564421 SENP3-EIF4A1A0A087X0R7 540 aa22.53■■□□□ 1.2
CPNE7-207ENST00000564421 PSDA5PKW4 1024 aaPredicted RBP22.53■■□□□ 1.2
CPNE7-207ENST00000564421 RIPK4P57078 832 aa22.53■■□□□ 1.2
CPNE7-207ENST00000564421 KCPQ6ZWJ8 1503 aa22.52■■□□□ 1.2
CPNE7-207ENST00000564421 ATP6V1AP38606 617 aa22.52■■□□□ 1.2
CPNE7-207ENST00000564421 HNRNPUQ00839 825 aaKnown RBP eCLIP22.52■■□□□ 1.2
CPNE7-207ENST00000564421 DCTN1Q14203 1278 aa22.52■■□□□ 1.2
CPNE7-207ENST00000564421 AKT1S1Q96B36 256 aa22.52■■□□□ 1.2
CPNE7-207ENST00000564421 KDM3BQ7LBC6 1761 aa22.52■■□□□ 1.2
CPNE7-207ENST00000564421 LMOD3Q0VAK6 560 aa22.51■■□□□ 1.19
CPNE7-207ENST00000564421 RBM42Q9BTD8 480 aaKnown RBP22.51■■□□□ 1.19
CPNE7-207ENST00000564421 MYH14Q7Z406 1995 aaKnown RBP22.5■■□□□ 1.19
CPNE7-207ENST00000564421 SLC39A6Q13433 755 aa22.5■■□□□ 1.19
CPNE7-207ENST00000564421 ZNF827Q17R98 1081 aa22.5■■□□□ 1.19
CPNE7-207ENST00000564421 SLC4A9Q96Q91 983 aa22.5■■□□□ 1.19
CPNE7-207ENST00000564421 NEUROD2Q15784 382 aa22.49■■□□□ 1.19
CPNE7-207ENST00000564421 RRP7AQ9Y3A4 280 aaKnown RBP22.49■■□□□ 1.19
CPNE7-207ENST00000564421 BTBD11A6QL63 1104 aa22.48■■□□□ 1.19
CPNE7-207ENST00000564421 PTCD1O75127 700 aaKnown RBP22.48■■□□□ 1.19
CPNE7-207ENST00000564421 ITPK1Q13572 414 aa22.48■■□□□ 1.19
CPNE7-207ENST00000564421 ZNF790Q6PG37 636 aa22.48■■□□□ 1.19
CPNE7-207ENST00000564421 TTC5Q8N0Z6 440 aa22.48■■□□□ 1.19
CPNE7-207ENST00000564421 SALL2Q9Y467 1007 aaPredicted RBP22.48■■□□□ 1.19
CPNE7-207ENST00000564421 TAF7Q15545 349 aaPredicted RBP22.47■■□□□ 1.19
CPNE7-207ENST00000564421 LINC00116Q8NCU8 138 aa22.47■■□□□ 1.19
CPNE7-207ENST00000564421 VSIG10Q8N0Z9 540 aa22.46■■□□□ 1.19
CPNE7-207ENST00000564421 TFCP2L1Q9NZI6 479 aa22.45■■□□□ 1.18
CPNE7-207ENST00000564421 LRP5O75197 1615 aa22.44■■□□□ 1.18
CPNE7-207ENST00000564421 NGEFQ8N5V2 710 aa22.44■■□□□ 1.18
CPNE7-207ENST00000564421 THUMPD2Q9BTF0 503 aaKnown RBP22.44■■□□□ 1.18
CPNE7-207ENST00000564421 TRIM35Q9UPQ4 493 aa22.44■■□□□ 1.18
CPNE7-207ENST00000564421 HEG1Q9ULI3 1381 aa22.43■■□□□ 1.18
CPNE7-207ENST00000564421 RC3H1Q5TC82 1133 aaKnown RBP22.43■■□□□ 1.18
CPNE7-207ENST00000564421 AK7Q96M32 723 aa22.43■■□□□ 1.18
CPNE7-207ENST00000564421 PNPLA7Q6ZV29 1317 aa22.42■■□□□ 1.18
CPNE7-207ENST00000564421 CNTNAP4Q9C0A0 1308 aa22.42■■□□□ 1.18
CPNE7-207ENST00000564421 ZNF496Q96IT1 587 aaPredicted RBP22.42■■□□□ 1.18
CPNE7-207ENST00000564421 FMNL2Q96PY5 1086 aa22.42■■□□□ 1.18
CPNE7-207ENST00000564421 COL24A1Q17RW2 1714 aa22.42■■□□□ 1.18
CPNE7-207ENST00000564421 NCBP3Q53F19 620 aaKnown RBP22.41■■□□□ 1.18
CPNE7-207ENST00000564421 BABAM1Q9NWV8 329 aa22.41■■□□□ 1.18
CPNE7-207ENST00000564421 LAMB4A4D0S4 1761 aa22.4■■□□□ 1.18
CPNE7-207ENST00000564421 KCNQ3O43525 872 aa22.4■■□□□ 1.18
CPNE7-207ENST00000564421 DNAJC10Q8IXB1 793 aa22.4■■□□□ 1.18
CPNE7-207ENST00000564421 FLAD1Q8NFF5 587 aa22.4■■□□□ 1.18
CPNE7-207ENST00000564421 CCDC27Q2M243 656 aa22.39■■□□□ 1.17
CPNE7-207ENST00000564421 TEX13AQ9BXU3 409 aaPredicted RBP22.39■■□□□ 1.17
CPNE7-207ENST00000564421 PDGFDQ9GZP0 370 aaPredicted RBP22.39■■□□□ 1.17
CPNE7-207ENST00000564421 ZBED9Q6R2W3 1325 aa22.38■■□□□ 1.17
CPNE7-207ENST00000564421 SSFA2P28290 1259 aa22.38■■□□□ 1.17
CPNE7-207ENST00000564421 C4AP0C0L4 1744 aa22.37■■□□□ 1.17
CPNE7-207ENST00000564421 GNPATO15228 680 aa22.37■■□□□ 1.17
CPNE7-207ENST00000564421 WWC1Q8IX03 1113 aa22.37■■□□□ 1.17
CPNE7-207ENST00000564421 SLC16A10Q8TF71 515 aa22.37■■□□□ 1.17
CPNE7-207ENST00000564421 MIS18AQ9NYP9 233 aa22.37■■□□□ 1.17
CPNE7-207ENST00000564421 CYP19A1P11511 503 aaPredicted RBP22.36■■□□□ 1.17
CPNE7-207ENST00000564421 CRKLP46109 303 aaKnown RBP22.36■■□□□ 1.17
CPNE7-207ENST00000564421 COL23A1Q86Y22 540 aaPredicted RBP22.36■■□□□ 1.17
CPNE7-207ENST00000564421 RPS6KA4O75676 772 aa22.35■■□□□ 1.17
CPNE7-207ENST00000564421 TSPYL4Q9UJ04 414 aa22.35■■□□□ 1.17
CPNE7-207ENST00000564421 RTCBQ9Y3I0 505 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms