RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 THUMPD2Q9BTF0 503 aaKnown RBP16.84■□□□□ 0.29
SPG7-209ENST00000564047 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
SPG7-209ENST00000564047 RNMTO43148 476 aaKnown RBP16.83■□□□□ 0.28
SPG7-209ENST00000564047 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
SPG7-209ENST00000564047 DDX54Q8TDD1 881 aaKnown RBP16.83■□□□□ 0.28
SPG7-209ENST00000564047 DLG5Q8TDM6 1919 aa16.83■□□□□ 0.28
SPG7-209ENST00000564047 CDCA7LQ96GN5 454 aa16.83■□□□□ 0.28
SPG7-209ENST00000564047 DCAF5Q96JK2 942 aa16.83■□□□□ 0.28
SPG7-209ENST00000564047 KCNQ2O43526 872 aa16.82■□□□□ 0.28
SPG7-209ENST00000564047 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
SPG7-209ENST00000564047 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
SPG7-209ENST00000564047 IFT57Q9NWB7 429 aa16.82■□□□□ 0.28
SPG7-209ENST00000564047 GNAI1P63096 354 aa16.81■□□□□ 0.28
SPG7-209ENST00000564047 CFAP44Q96MT7 982 aa16.81■□□□□ 0.28
SPG7-209ENST00000564047 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
SPG7-209ENST00000564047 SPINK5Q9NQ38 1064 aaPredicted RBP16.81■□□□□ 0.28
SPG7-209ENST00000564047 ADAMTS7Q9UKP4 1686 aa16.81■□□□□ 0.28
SPG7-209ENST00000564047 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
SPG7-209ENST00000564047 KDM6AO15550 1401 aaPredicted RBP16.8■□□□□ 0.28
SPG7-209ENST00000564047 SHANK3Q9BYB0 1731 aa16.8■□□□□ 0.28
SPG7-209ENST00000564047 ZNF853P0CG23 659 aa16.8■□□□□ 0.28
SPG7-209ENST00000564047 TEFQ10587 303 aa16.79■□□□□ 0.28
SPG7-209ENST00000564047 DUSP27Q5VZP5 1158 aa16.79■□□□□ 0.28
SPG7-209ENST00000564047 BABAM1Q9NWV8 329 aa16.79■□□□□ 0.28
SPG7-209ENST00000564047 CHL1O00533 1208 aa16.78■□□□□ 0.28
SPG7-209ENST00000564047 TAF7Q15545 349 aaPredicted RBP16.78■□□□□ 0.28
SPG7-209ENST00000564047 ERVV-2B6SEH9 535 aa16.77■□□□□ 0.28
SPG7-209ENST00000564047 MARCH10Q8NA82 808 aaPredicted RBP16.77■□□□□ 0.28
SPG7-209ENST00000564047 LAS1LQ9Y4W2 734 aaKnown RBP16.77■□□□□ 0.28
SPG7-209ENST00000564047 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
SPG7-209ENST00000564047 MRC1P22897 1456 aa16.76■□□□□ 0.27
SPG7-209ENST00000564047 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
SPG7-209ENST00000564047 ZNF784Q8NCA9 323 aaPredicted RBP16.75■□□□□ 0.27
SPG7-209ENST00000564047 TSR2Q969E8 191 aaKnown RBP16.75■□□□□ 0.27
SPG7-209ENST00000564047 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
SPG7-209ENST00000564047 CHD4Q14839 1912 aa16.74■□□□□ 0.27
SPG7-209ENST00000564047 CABP4P57796 275 aa16.74■□□□□ 0.27
SPG7-209ENST00000564047 TSPYL4Q9UJ04 414 aa16.74■□□□□ 0.27
SPG7-209ENST00000564047 SCN11AQ9UI33 1791 aa16.74■□□□□ 0.27
SPG7-209ENST00000564047 NFATC2IPQ8NCF5 419 aa16.73■□□□□ 0.27
SPG7-209ENST00000564047 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
SPG7-209ENST00000564047 BTBD11A6QL63 1104 aa16.72■□□□□ 0.27
SPG7-209ENST00000564047 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
SPG7-209ENST00000564047 BCL9O00512 1426 aa16.71■□□□□ 0.27
SPG7-209ENST00000564047 RGPD3A6NKT7 1758 aaPredicted RBP16.71■□□□□ 0.27
SPG7-209ENST00000564047 RGPD4Q7Z3J3 1758 aa16.71■□□□□ 0.27
SPG7-209ENST00000564047 CT47B1P0C2W7 299 aaPredicted RBP16.7■□□□□ 0.26
SPG7-209ENST00000564047 EXOSC9Q06265 439 aaKnown RBP16.7■□□□□ 0.26
SPG7-209ENST00000564047 IFFO2Q5TF58 517 aa16.7■□□□□ 0.26
SPG7-209ENST00000564047 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
SPG7-209ENST00000564047 TOGARAM1Q9Y4F4 1720 aa16.69■□□□□ 0.26
SPG7-209ENST00000564047 SIPA1L3O60292 1781 aaPredicted RBP16.69■□□□□ 0.26
SPG7-209ENST00000564047 CASZ1Q86V15 1759 aa16.69■□□□□ 0.26
SPG7-209ENST00000564047 PRIM1P49642 420 aaKnown RBP16.68■□□□□ 0.26
SPG7-209ENST00000564047 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
SPG7-209ENST00000564047 C1QTNF8P60827 252 aa16.67■□□□□ 0.26
SPG7-209ENST00000564047 EIF4A1P60842 406 aaKnown RBP16.67■□□□□ 0.26
SPG7-209ENST00000564047 PIGBQ92521 554 aa16.67■□□□□ 0.26
SPG7-209ENST00000564047 VIRMAQ69YN4 1812 aaKnown RBP16.67■□□□□ 0.26
SPG7-209ENST00000564047 GOLGB1Q14789 3259 aaKnown RBP16.67■□□□□ 0.26
SPG7-209ENST00000564047 SBF2Q86WG5 1849 aa16.66■□□□□ 0.26
SPG7-209ENST00000564047 PLSCR1O15162 318 aa16.66■□□□□ 0.26
SPG7-209ENST00000564047 KCNQ3O43525 872 aa16.66■□□□□ 0.26
SPG7-209ENST00000564047 TTC5Q8N0Z6 440 aa16.66■□□□□ 0.26
SPG7-209ENST00000564047 C8orf58Q8NAV2 365 aa16.66■□□□□ 0.26
SPG7-209ENST00000564047 KDM3BQ7LBC6 1761 aa16.66■□□□□ 0.26
SPG7-209ENST00000564047 SOS1Q07889 1333 aaPredicted RBP16.66■□□□□ 0.26
SPG7-209ENST00000564047 SLC39A6Q13433 755 aa16.65■□□□□ 0.26
SPG7-209ENST00000564047 TWISTNBQ3B726 338 aaPredicted RBP16.65■□□□□ 0.26
SPG7-209ENST00000564047 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
SPG7-209ENST00000564047 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
SPG7-209ENST00000564047 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
SPG7-209ENST00000564047 RCAN3Q9UKA8 241 aa16.65■□□□□ 0.26
SPG7-209ENST00000564047 DOT1LQ8TEK3 1739 aa16.65■□□□□ 0.26
SPG7-209ENST00000564047 HEG1Q9ULI3 1381 aa16.64■□□□□ 0.26
SPG7-209ENST00000564047 VAMP4O75379 141 aa16.64■□□□□ 0.25
SPG7-209ENST00000564047 ZBTB7AO95365 584 aa16.64■□□□□ 0.25
SPG7-209ENST00000564047 TSPYL6Q8N831 410 aa16.64■□□□□ 0.25
SPG7-209ENST00000564047 ANO8Q9HCE9 1232 aaPredicted RBP16.64■□□□□ 0.25
SPG7-209ENST00000564047 HOXB7P09629 217 aa16.63■□□□□ 0.25
SPG7-209ENST00000564047 KRT24Q2M2I5 525 aa16.63■□□□□ 0.25
SPG7-209ENST00000564047 BCL11BQ9C0K0 894 aaPredicted RBP16.63■□□□□ 0.25
SPG7-209ENST00000564047 ATG3Q9NT62 314 aa16.63■□□□□ 0.25
SPG7-209ENST00000564047 ELL2O00472 640 aaPredicted RBP16.62■□□□□ 0.25
SPG7-209ENST00000564047 ZNF496Q96IT1 587 aaPredicted RBP16.62■□□□□ 0.25
SPG7-209ENST00000564047 FMNL2Q96PY5 1086 aa16.62■□□□□ 0.25
SPG7-209ENST00000564047 PAPPAQ13219 1627 aa16.62■□□□□ 0.25
SPG7-209ENST00000564047 CHMP4AQ9BY43 222 aa16.61■□□□□ 0.25
SPG7-209ENST00000564047 ASAP1Q9ULH1 1129 aa16.61■□□□□ 0.25
SPG7-209ENST00000564047 ITGB4P16144 1822 aa16.61■□□□□ 0.25
SPG7-209ENST00000564047 GIGYF1O75420 1035 aaPredicted RBP16.6■□□□□ 0.25
SPG7-209ENST00000564047 PTGER2P43116 358 aa16.6■□□□□ 0.25
SPG7-209ENST00000564047 RARSP54136 660 aaKnown RBP16.6■□□□□ 0.25
SPG7-209ENST00000564047 SYT17Q9BSW7 474 aa16.6■□□□□ 0.25
SPG7-209ENST00000564047 FHDC1Q9C0D6 1143 aaPredicted RBP16.6■□□□□ 0.25
SPG7-209ENST00000564047 PDGFDQ9GZP0 370 aaPredicted RBP16.6■□□□□ 0.25
SPG7-209ENST00000564047 ATF5Q9Y2D1 282 aaPredicted RBP16.6■□□□□ 0.25
SPG7-209ENST00000564047 KCPQ6ZWJ8 1503 aa16.6■□□□□ 0.25
SPG7-209ENST00000564047 NHSQ6T4R5 1651 aa16.59■□□□□ 0.25
SPG7-209ENST00000564047 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms