RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 GNAT3A8MTJ3 354 aa19.54■□□□□ 0.72
SCAMP2-203ENST00000563663 TMOD3Q9NYL9 352 aa19.54■□□□□ 0.72
SCAMP2-203ENST00000563663 PALLDQ8WX93 1383 aa19.54■□□□□ 0.72
SCAMP2-203ENST00000563663 ATG3Q9NT62 314 aa19.53■□□□□ 0.72
SCAMP2-203ENST00000563663 ASAP1Q9ULH1 1129 aa19.53■□□□□ 0.72
SCAMP2-203ENST00000563663 C5P01031 1676 aa19.53■□□□□ 0.72
SCAMP2-203ENST00000563663 TUBGCP6Q96RT7 1819 aa19.53■□□□□ 0.72
SCAMP2-203ENST00000563663 SLC52A2Q9HAB3 445 aa19.52■□□□□ 0.72
SCAMP2-203ENST00000563663 KCPQ6ZWJ8 1503 aa19.52■□□□□ 0.72
SCAMP2-203ENST00000563663 WDR43Q15061 677 aaKnown RBP eCLIP19.52■□□□□ 0.71
SCAMP2-203ENST00000563663 NFE2L2Q16236 605 aa19.52■□□□□ 0.71
SCAMP2-203ENST00000563663 CCDC146Q8IYE0 955 aa19.52■□□□□ 0.71
SCAMP2-203ENST00000563663 NFATC2IPQ8NCF5 419 aa19.52■□□□□ 0.71
SCAMP2-203ENST00000563663 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.71
SCAMP2-203ENST00000563663 MRS2Q9HD23 443 aa19.52■□□□□ 0.71
SCAMP2-203ENST00000563663 SUPT16HQ9Y5B9 1047 aaKnown RBP19.52■□□□□ 0.71
SCAMP2-203ENST00000563663 COL5A3P25940 1745 aaPredicted RBP19.51■□□□□ 0.71
SCAMP2-203ENST00000563663 TJP1Q07157 1748 aa19.5■□□□□ 0.71
SCAMP2-203ENST00000563663 KCNQ4P56696 695 aa19.49■□□□□ 0.71
SCAMP2-203ENST00000563663 SLC4A9Q96Q91 983 aa19.49■□□□□ 0.71
SCAMP2-203ENST00000563663 CABP4P57796 275 aa19.49■□□□□ 0.71
SCAMP2-203ENST00000563663 RUNDC1Q96C34 613 aa19.49■□□□□ 0.71
SCAMP2-203ENST00000563663 HTATSF1O43719 755 aaKnown RBP19.48■□□□□ 0.71
SCAMP2-203ENST00000563663 TMPOP42166 694 aaKnown RBP19.48■□□□□ 0.71
SCAMP2-203ENST00000563663 DCTN1Q14203 1278 aa19.48■□□□□ 0.71
SCAMP2-203ENST00000563663 MCM10Q7L590 875 aa19.48■□□□□ 0.71
SCAMP2-203ENST00000563663 QSER1Q2KHR3 1735 aa19.48■□□□□ 0.71
SCAMP2-203ENST00000563663 KDM3BQ7LBC6 1761 aa19.48■□□□□ 0.71
SCAMP2-203ENST00000563663 SLC27A3Q5K4L6 730 aa19.47■□□□□ 0.71
SCAMP2-203ENST00000563663 PNNQ9H307 717 aaKnown RBP19.47■□□□□ 0.71
SCAMP2-203ENST00000563663 CASZ1Q86V15 1759 aa19.47■□□□□ 0.71
SCAMP2-203ENST00000563663 MAPK8IP3Q9UPT6 1336 aa19.47■□□□□ 0.71
SCAMP2-203ENST00000563663 C4BP0C0L5 1744 aa19.46■□□□□ 0.71
SCAMP2-203ENST00000563663 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
SCAMP2-203ENST00000563663 SMARCC1Q92922 1105 aaPredicted RBP19.46■□□□□ 0.71
SCAMP2-203ENST00000563663 LOC102724428A0A0B4J2F2 783 aa19.45■□□□□ 0.7
SCAMP2-203ENST00000563663 SIK1P57059 783 aa19.45■□□□□ 0.7
SCAMP2-203ENST00000563663 UBR3Q6ZT12 1888 aa19.45■□□□□ 0.7
SCAMP2-203ENST00000563663 ZNF827Q17R98 1081 aa19.44■□□□□ 0.7
SCAMP2-203ENST00000563663 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
SCAMP2-203ENST00000563663 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
SCAMP2-203ENST00000563663 TRIM35Q9UPQ4 493 aa19.44■□□□□ 0.7
SCAMP2-203ENST00000563663 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
SCAMP2-203ENST00000563663 ITPK1Q13572 414 aa19.44■□□□□ 0.7
SCAMP2-203ENST00000563663 RRP7AQ9Y3A4 280 aaKnown RBP19.44■□□□□ 0.7
SCAMP2-203ENST00000563663 AKT1S1Q96B36 256 aa19.43■□□□□ 0.7
SCAMP2-203ENST00000563663 APAF1O14727 1248 aa19.42■□□□□ 0.7
SCAMP2-203ENST00000563663 RIPK4P57078 832 aa19.42■□□□□ 0.7
SCAMP2-203ENST00000563663 NEFMP07197 916 aa19.41■□□□□ 0.7
SCAMP2-203ENST00000563663 LINC00116Q8NCU8 138 aa19.41■□□□□ 0.7
SCAMP2-203ENST00000563663 KCNQ3O43525 872 aa19.4■□□□□ 0.7
SCAMP2-203ENST00000563663 TEFQ10587 303 aa19.4■□□□□ 0.7
SCAMP2-203ENST00000563663 AMIGO3Q86WK7 504 aa19.4■□□□□ 0.7
SCAMP2-203ENST00000563663 RTF1Q92541 710 aaKnown RBP19.4■□□□□ 0.7
SCAMP2-203ENST00000563663 R3HDM1Q15032 1099 aaKnown RBP19.39■□□□□ 0.7
SCAMP2-203ENST00000563663 PSDA5PKW4 1024 aaPredicted RBP19.39■□□□□ 0.69
SCAMP2-203ENST00000563663 SLC15A2Q16348 729 aa19.39■□□□□ 0.69
SCAMP2-203ENST00000563663 ZNF790Q6PG37 636 aa19.39■□□□□ 0.69
SCAMP2-203ENST00000563663 PDGFDQ9GZP0 370 aaPredicted RBP19.39■□□□□ 0.69
SCAMP2-203ENST00000563663 PTCD1O75127 700 aaKnown RBP19.38■□□□□ 0.69
SCAMP2-203ENST00000563663 ZNF496Q96IT1 587 aaPredicted RBP19.37■□□□□ 0.69
SCAMP2-203ENST00000563663 COL24A1Q17RW2 1714 aa19.37■□□□□ 0.69
SCAMP2-203ENST00000563663 ATP6V1AP38606 617 aa19.37■□□□□ 0.69
SCAMP2-203ENST00000563663 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
SCAMP2-203ENST00000563663 RBM42Q9BTD8 480 aaKnown RBP19.36■□□□□ 0.69
SCAMP2-203ENST00000563663 HEG1Q9ULI3 1381 aa19.36■□□□□ 0.69
SCAMP2-203ENST00000563663 BTBD11A6QL63 1104 aa19.35■□□□□ 0.69
SCAMP2-203ENST00000563663 TAF7Q15545 349 aaPredicted RBP19.35■□□□□ 0.69
SCAMP2-203ENST00000563663 LAMB4A4D0S4 1761 aa19.35■□□□□ 0.69
SCAMP2-203ENST00000563663 PNPLA7Q6ZV29 1317 aa19.35■□□□□ 0.69
SCAMP2-203ENST00000563663 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
SCAMP2-203ENST00000563663 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
SCAMP2-203ENST00000563663 FAM9BQ8IZU0 186 aa19.34■□□□□ 0.69
SCAMP2-203ENST00000563663 MIS18AQ9NYP9 233 aa19.34■□□□□ 0.69
SCAMP2-203ENST00000563663 C4AP0C0L4 1744 aa19.34■□□□□ 0.69
SCAMP2-203ENST00000563663 HNRNPUQ00839 825 aaKnown RBP eCLIP19.34■□□□□ 0.69
SCAMP2-203ENST00000563663 STK32BQ9NY57 414 aa19.34■□□□□ 0.69
SCAMP2-203ENST00000563663 CNTNAP4Q9C0A0 1308 aa19.33■□□□□ 0.69
SCAMP2-203ENST00000563663 SENP3-EIF4A1A0A087X0R7 540 aa19.33■□□□□ 0.68
SCAMP2-203ENST00000563663 DNAJC10Q8IXB1 793 aa19.33■□□□□ 0.68
SCAMP2-203ENST00000563663 VSIG10Q8N0Z9 540 aa19.33■□□□□ 0.68
SCAMP2-203ENST00000563663 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
SCAMP2-203ENST00000563663 NEFLP07196 543 aa19.32■□□□□ 0.68
SCAMP2-203ENST00000563663 CCDC27Q2M243 656 aa19.32■□□□□ 0.68
SCAMP2-203ENST00000563663 LRP5O75197 1615 aa19.31■□□□□ 0.68
SCAMP2-203ENST00000563663 SMIM5Q71RC9 77 aa19.31■□□□□ 0.68
SCAMP2-203ENST00000563663 PRAMEF22A3QJZ6 481 aa19.3■□□□□ 0.68
SCAMP2-203ENST00000563663 CHL1O00533 1208 aa19.3■□□□□ 0.68
SCAMP2-203ENST00000563663 ZNF853P0CG23 659 aa19.3■□□□□ 0.68
SCAMP2-203ENST00000563663 CYP19A1P11511 503 aaPredicted RBP19.3■□□□□ 0.68
SCAMP2-203ENST00000563663 INTS5Q6P9B9 1019 aaKnown RBP19.3■□□□□ 0.68
SCAMP2-203ENST00000563663 TTC5Q8N0Z6 440 aa19.3■□□□□ 0.68
SCAMP2-203ENST00000563663 RC3H1Q5TC82 1133 aaKnown RBP19.29■□□□□ 0.68
SCAMP2-203ENST00000563663 CRKLP46109 303 aaKnown RBP19.29■□□□□ 0.68
SCAMP2-203ENST00000563663 EIF4A1P60842 406 aaKnown RBP19.29■□□□□ 0.68
SCAMP2-203ENST00000563663 WWC1Q8IX03 1113 aa19.29■□□□□ 0.68
SCAMP2-203ENST00000563663 FMNL2Q96PY5 1086 aa19.29■□□□□ 0.68
SCAMP2-203ENST00000563663 BABAM1Q9NWV8 329 aa19.29■□□□□ 0.68
SCAMP2-203ENST00000563663 COL23A1Q86Y22 540 aaPredicted RBP19.27■□□□□ 0.68
SCAMP2-203ENST00000563663 TFCP2L1Q9NZI6 479 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms