RNA–Protein interactions for RNA: ENST00000563642.6

CLCN7-205, Transcript of chloride voltage-gated channel 7, humanhuman

TSL 2

Gene CLCN7, Length 4,184 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN7-205ENST00000563642 TMEM2Q9UHN6 1383 aa16.47■□□□□ 0.23
CLCN7-205ENST00000563642 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.47■□□□□ 0.23
CLCN7-205ENST00000563642 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
CLCN7-205ENST00000563642 HSPA2P54652 639 aa16.47■□□□□ 0.23
CLCN7-205ENST00000563642 HTATSF1O43719 755 aaKnown RBP16.46■□□□□ 0.23
CLCN7-205ENST00000563642 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
CLCN7-205ENST00000563642 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
CLCN7-205ENST00000563642 FIBPO43427 364 aa16.46■□□□□ 0.23
CLCN7-205ENST00000563642 RNF17Q9BXT8 1623 aaKnown RBP16.46■□□□□ 0.22
CLCN7-205ENST00000563642 MYOM2P54296 1465 aa16.46■□□□□ 0.22
CLCN7-205ENST00000563642 EVA1CP58658 441 aa16.45■□□□□ 0.22
CLCN7-205ENST00000563642 TBX22Q9Y458 520 aa16.45■□□□□ 0.22
CLCN7-205ENST00000563642 TRPM1Q7Z4N2 1603 aa16.45■□□□□ 0.22
CLCN7-205ENST00000563642 CCDC9Q9Y3X0 531 aaKnown RBP16.45■□□□□ 0.22
CLCN7-205ENST00000563642 SPHKAPQ2M3C7 1700 aa16.45■□□□□ 0.22
CLCN7-205ENST00000563642 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
CLCN7-205ENST00000563642 DDIT3P35638 169 aa16.45■□□□□ 0.22
CLCN7-205ENST00000563642 UVSSAQ2YD98 709 aa16.45■□□□□ 0.22
CLCN7-205ENST00000563642 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
CLCN7-205ENST00000563642 SBNO2Q9Y2G9 1366 aa16.44■□□□□ 0.22
CLCN7-205ENST00000563642 KIDINS220Q9ULH0 1771 aa16.44■□□□□ 0.22
CLCN7-205ENST00000563642 CEP152O94986 1710 aa16.44■□□□□ 0.22
CLCN7-205ENST00000563642 SLC4A2P04920 1241 aa16.44■□□□□ 0.22
CLCN7-205ENST00000563642 CCDC27Q2M243 656 aa16.44■□□□□ 0.22
CLCN7-205ENST00000563642 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
CLCN7-205ENST00000563642 RIMBP3CA6NJZ7 1639 aa16.43■□□□□ 0.22
CLCN7-205ENST00000563642 RIMBP3BA6NNM3 1639 aa16.43■□□□□ 0.22
CLCN7-205ENST00000563642 RIMBP3Q9UFD9 1639 aa16.43■□□□□ 0.22
CLCN7-205ENST00000563642 INO80Q9ULG1 1556 aaPredicted RBP16.43■□□□□ 0.22
CLCN7-205ENST00000563642 GABPB1Q06547 395 aaPredicted RBP16.43■□□□□ 0.22
CLCN7-205ENST00000563642 KRT222Q8N1A0 295 aa16.43■□□□□ 0.22
CLCN7-205ENST00000563642 IRX3P78415 501 aaPredicted RBP16.43■□□□□ 0.22
CLCN7-205ENST00000563642 TEX35Q5T0J7 233 aa16.43■□□□□ 0.22
CLCN7-205ENST00000563642 CCDC183Q5T5S1 534 aa16.43■□□□□ 0.22
CLCN7-205ENST00000563642 TRIM34Q9BYJ4 488 aa16.43■□□□□ 0.22
CLCN7-205ENST00000563642 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
CLCN7-205ENST00000563642 TNNT1P13805 278 aa16.42■□□□□ 0.22
CLCN7-205ENST00000563642 ZNF710Q8N1W2 664 aa16.42■□□□□ 0.22
CLCN7-205ENST00000563642 ATP6V1DQ9Y5K8 247 aa16.42■□□□□ 0.22
CLCN7-205ENST00000563642 ABCC11Q96J66 1382 aa16.42■□□□□ 0.22
CLCN7-205ENST00000563642 ZNF530Q6P9A1 599 aaPredicted RBP16.41■□□□□ 0.22
CLCN7-205ENST00000563642 ZBTB40Q9NUA8 1239 aa16.41■□□□□ 0.22
CLCN7-205ENST00000563642 EIF4A2Q14240 407 aaKnown RBP16.41■□□□□ 0.22
CLCN7-205ENST00000563642 NCOA3Q9Y6Q9 1424 aa16.41■□□□□ 0.22
CLCN7-205ENST00000563642 MCM2P49736 904 aa16.4■□□□□ 0.22
CLCN7-205ENST00000563642 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
CLCN7-205ENST00000563642 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
CLCN7-205ENST00000563642 AIMP1Q12904 312 aaKnown RBP16.4■□□□□ 0.22
CLCN7-205ENST00000563642 TMEM51Q9NW97 253 aa16.4■□□□□ 0.22
CLCN7-205ENST00000563642 ERC2O15083 957 aa16.39■□□□□ 0.21
CLCN7-205ENST00000563642 MAP3K4Q9Y6R4 1608 aa16.39■□□□□ 0.21
CLCN7-205ENST00000563642 TSPYL1Q9H0U9 437 aa16.39■□□□□ 0.21
CLCN7-205ENST00000563642 STRN4Q9NRL3 753 aa16.39■□□□□ 0.21
CLCN7-205ENST00000563642 ARHGAP31Q2M1Z3 1444 aa16.39■□□□□ 0.21
CLCN7-205ENST00000563642 PPRC1Q5VV67 1664 aaKnown RBP16.39■□□□□ 0.21
CLCN7-205ENST00000563642 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.38■□□□□ 0.21
CLCN7-205ENST00000563642 V9GYY5 206 aaPredicted RBP16.38■□□□□ 0.21
CLCN7-205ENST00000563642 KDM5AP29375 1690 aaKnown RBP16.38■□□□□ 0.21
CLCN7-205ENST00000563642 CCDC192P0DO97 292 aa16.38■□□□□ 0.21
CLCN7-205ENST00000563642 PLEKHO1Q53GL0 409 aaPredicted RBP16.38■□□□□ 0.21
CLCN7-205ENST00000563642 GTF2F1P35269 517 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLCN7-205ENST00000563642 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
CLCN7-205ENST00000563642 TMX3Q96JJ7 454 aa16.37■□□□□ 0.21
CLCN7-205ENST00000563642 MBIPQ9NS73 344 aa16.37■□□□□ 0.21
CLCN7-205ENST00000563642 KRT28Q7Z3Y7 464 aa16.37■□□□□ 0.21
CLCN7-205ENST00000563642 USP48Q86UV5 1035 aa16.37■□□□□ 0.21
CLCN7-205ENST00000563642 DIP2CQ9Y2E4 1556 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 HDGFL1Q5TGJ6 251 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 CLEC17AQ6ZS10 378 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 KIF2CQ99661 725 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 ABCA6Q8N139 1617 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
CLCN7-205ENST00000563642 GOLGA6L19H0YKK7 550 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 GPS2Q13227 327 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 MAP3K19Q56UN5 1328 aa16.36■□□□□ 0.21
CLCN7-205ENST00000563642 VIRMAQ69YN4 1812 aaKnown RBP16.36■□□□□ 0.21
CLCN7-205ENST00000563642 ORAI2Q96SN7 254 aa16.35■□□□□ 0.21
CLCN7-205ENST00000563642 UPF3BQ9BZI7 483 aaKnown RBP16.35■□□□□ 0.21
CLCN7-205ENST00000563642 KDM4AO75164 1064 aa16.35■□□□□ 0.21
CLCN7-205ENST00000563642 KRT24Q2M2I5 525 aa16.35■□□□□ 0.21
CLCN7-205ENST00000563642 CERS3Q8IU89 383 aa16.35■□□□□ 0.21
CLCN7-205ENST00000563642 SMC3Q9UQE7 1217 aa16.35■□□□□ 0.21
CLCN7-205ENST00000563642 GNAT3A8MTJ3 354 aa16.35■□□□□ 0.21
CLCN7-205ENST00000563642 KCNH5Q8NCM2 988 aa16.35■□□□□ 0.21
CLCN7-205ENST00000563642 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
CLCN7-205ENST00000563642 PRDM11Q9NQV5 511 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 C9orf78Q9NZ63 289 aaPredicted RBP16.34■□□□□ 0.21
CLCN7-205ENST00000563642 GPATCH3Q96I76 525 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 NOL10Q9BSC4 688 aaKnown RBP16.34■□□□□ 0.21
CLCN7-205ENST00000563642 USP26Q9BXU7 913 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 PTGS1P23219 599 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 TSPYL6Q8N831 410 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 ROBO2Q9HCK4 1378 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 GADD45BO75293 160 aaPredicted RBP16.34■□□□□ 0.21
CLCN7-205ENST00000563642 APPP05067 770 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 CCDC30Q5VVM6 783 aa16.34■□□□□ 0.21
CLCN7-205ENST00000563642 MPRIPQ6WCQ1 1025 aa16.33■□□□□ 0.21
CLCN7-205ENST00000563642 GOLGA6L1Q8N7Z2 621 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms