RNA–Protein interactions for RNA: ENST00000562879.5

RPL13-210, Transcript of ribosomal protein L13, humanhuman

TSL 1 (best)

Gene RPL13, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-210ENST00000562879 CFAP53Q96M91 514 aa20.47■□□□□ 0.87
RPL13-210ENST00000562879 SIPA1L3O60292 1781 aaPredicted RBP20.46■□□□□ 0.87
RPL13-210ENST00000562879 TJP1Q07157 1748 aa20.45■□□□□ 0.86
RPL13-210ENST00000562879 UBR2Q8IWV8 1755 aa20.45■□□□□ 0.86
RPL13-210ENST00000562879 MTHFSDQ2M296 383 aaKnown RBP20.45■□□□□ 0.86
RPL13-210ENST00000562879 CABP4P57796 275 aa20.44■□□□□ 0.86
RPL13-210ENST00000562879 ITPK1Q13572 414 aa20.44■□□□□ 0.86
RPL13-210ENST00000562879 FLAD1Q8NFF5 587 aa20.44■□□□□ 0.86
RPL13-210ENST00000562879 SLC4A9Q96Q91 983 aa20.44■□□□□ 0.86
RPL13-210ENST00000562879 RSPH6AQ9H0K4 717 aa20.44■□□□□ 0.86
RPL13-210ENST00000562879 LINC00116Q8NCU8 138 aa20.43■□□□□ 0.86
RPL13-210ENST00000562879 ATF5Q9Y2D1 282 aaPredicted RBP20.43■□□□□ 0.86
RPL13-210ENST00000562879 COL23A1Q86Y22 540 aaPredicted RBP20.42■□□□□ 0.86
RPL13-210ENST00000562879 SLC52A2Q9HAB3 445 aa20.42■□□□□ 0.86
RPL13-210ENST00000562879 PPP1R1BQ9UD71 204 aaPredicted RBP20.42■□□□□ 0.86
RPL13-210ENST00000562879 U2SURPO15042 1029 aaKnown RBP20.41■□□□□ 0.86
RPL13-210ENST00000562879 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
RPL13-210ENST00000562879 SSFA2P28290 1259 aa20.41■□□□□ 0.86
RPL13-210ENST00000562879 CNGB1Q14028 1251 aaPredicted RBP20.41■□□□□ 0.86
RPL13-210ENST00000562879 AMIGO3Q86WK7 504 aa20.41■□□□□ 0.86
RPL13-210ENST00000562879 NFATC2IPQ8NCF5 419 aa20.41■□□□□ 0.86
RPL13-210ENST00000562879 KCPQ6ZWJ8 1503 aa20.41■□□□□ 0.86
RPL13-210ENST00000562879 ATP6V1AP38606 617 aa20.4■□□□□ 0.86
RPL13-210ENST00000562879 MYH14Q7Z406 1995 aaKnown RBP20.4■□□□□ 0.86
RPL13-210ENST00000562879 CEMIPQ8WUJ3 1361 aa20.4■□□□□ 0.86
RPL13-210ENST00000562879 CNTNAP4Q9C0A0 1308 aa20.4■□□□□ 0.86
RPL13-210ENST00000562879 LGR6Q9HBX8 967 aa20.4■□□□□ 0.86
RPL13-210ENST00000562879 NUDCQ9Y266 331 aa20.4■□□□□ 0.86
RPL13-210ENST00000562879 FCHSD2O94868 740 aa20.39■□□□□ 0.85
RPL13-210ENST00000562879 RC3H1Q5TC82 1133 aaKnown RBP20.39■□□□□ 0.85
RPL13-210ENST00000562879 GAS2L2Q8NHY3 880 aa20.39■□□□□ 0.85
RPL13-210ENST00000562879 AK7Q96M32 723 aa20.39■□□□□ 0.85
RPL13-210ENST00000562879 C4AP0C0L4 1744 aa20.37■□□□□ 0.85
RPL13-210ENST00000562879 ZEB1P37275 1124 aaPredicted RBP20.37■□□□□ 0.85
RPL13-210ENST00000562879 RALBP1Q15311 655 aa20.37■□□□□ 0.85
RPL13-210ENST00000562879 ARXQ96QS3 562 aa20.37■□□□□ 0.85
RPL13-210ENST00000562879 UTRNP46939 3433 aa20.37■□□□□ 0.85
RPL13-210ENST00000562879 PRKAR2BP31323 418 aa20.36■□□□□ 0.85
RPL13-210ENST00000562879 PHACTR3Q96KR7 559 aa20.36■□□□□ 0.85
RPL13-210ENST00000562879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.35■□□□□ 0.85
RPL13-210ENST00000562879 GNAT3A8MTJ3 354 aa20.35■□□□□ 0.85
RPL13-210ENST00000562879 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
RPL13-210ENST00000562879 FHDC1Q9C0D6 1143 aaPredicted RBP20.35■□□□□ 0.85
RPL13-210ENST00000562879 GOLGB1Q14789 3259 aaKnown RBP20.35■□□□□ 0.85
RPL13-210ENST00000562879 IL17REQ8NFR9 667 aa20.34■□□□□ 0.85
RPL13-210ENST00000562879 U2AF1L5P0DN76 240 aaPredicted RBP20.33■□□□□ 0.85
RPL13-210ENST00000562879 ADRA2BP18089 450 aa20.33■□□□□ 0.85
RPL13-210ENST00000562879 POLD1P28340 1107 aa20.33■□□□□ 0.85
RPL13-210ENST00000562879 U2AF1Q01081 240 aaKnown RBP eCLIP20.33■□□□□ 0.85
RPL13-210ENST00000562879 RBM42Q9BTD8 480 aaKnown RBP20.33■□□□□ 0.85
RPL13-210ENST00000562879 GNPATO15228 680 aa20.32■□□□□ 0.84
RPL13-210ENST00000562879 PTCD1O75127 700 aaKnown RBP20.32■□□□□ 0.84
RPL13-210ENST00000562879 DDX10Q13206 875 aaKnown RBP20.32■□□□□ 0.84
RPL13-210ENST00000562879 VSIG10Q8N0Z9 540 aa20.31■□□□□ 0.84
RPL13-210ENST00000562879 DLG5Q8TDM6 1919 aa20.3■□□□□ 0.84
RPL13-210ENST00000562879 RPS6KA4O75676 772 aa20.3■□□□□ 0.84
RPL13-210ENST00000562879 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
RPL13-210ENST00000562879 RTCBQ9Y3I0 505 aaKnown RBP20.29■□□□□ 0.84
RPL13-210ENST00000562879 MYBBP1AQ9BQG0 1328 aaKnown RBP20.28■□□□□ 0.84
RPL13-210ENST00000562879 KIF13BQ9NQT8 1826 aa20.28■□□□□ 0.84
RPL13-210ENST00000562879 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
RPL13-210ENST00000562879 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
RPL13-210ENST00000562879 MSH5O43196 834 aa20.27■□□□□ 0.84
RPL13-210ENST00000562879 PHF14O94880 888 aa20.27■□□□□ 0.84
RPL13-210ENST00000562879 TEFQ10587 303 aa20.27■□□□□ 0.84
RPL13-210ENST00000562879 SLC39A6Q13433 755 aa20.27■□□□□ 0.84
RPL13-210ENST00000562879 SMIM5Q71RC9 77 aa20.27■□□□□ 0.84
RPL13-210ENST00000562879 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
RPL13-210ENST00000562879 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
RPL13-210ENST00000562879 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
RPL13-210ENST00000562879 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
RPL13-210ENST00000562879 ARHGEF1Q92888 912 aaKnown RBP20.25■□□□□ 0.83
RPL13-210ENST00000562879 HEG1Q9ULI3 1381 aa20.24■□□□□ 0.83
RPL13-210ENST00000562879 TRAPPC3LQ5T215 181 aa20.24■□□□□ 0.83
RPL13-210ENST00000562879 DNAJC10Q8IXB1 793 aa20.24■□□□□ 0.83
RPL13-210ENST00000562879 CCDC87Q9NVE4 849 aa20.23■□□□□ 0.83
RPL13-210ENST00000562879 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
RPL13-210ENST00000562879 SOS1Q07889 1333 aaPredicted RBP20.23■□□□□ 0.83
RPL13-210ENST00000562879 KIAA1551Q9HCM1 1747 aa20.22■□□□□ 0.83
RPL13-210ENST00000562879 KDM3BQ7LBC6 1761 aa20.22■□□□□ 0.83
RPL13-210ENST00000562879 GYS1P13807 737 aa20.22■□□□□ 0.83
RPL13-210ENST00000562879 ZNF496Q96IT1 587 aaPredicted RBP20.22■□□□□ 0.83
RPL13-210ENST00000562879 PRKRIP1Q9H875 184 aaPredicted RBP20.22■□□□□ 0.83
RPL13-210ENST00000562879 TTC5Q8N0Z6 440 aa20.21■□□□□ 0.83
RPL13-210ENST00000562879 NLGN1Q8N2Q7 840 aa20.21■□□□□ 0.83
RPL13-210ENST00000562879 PNNQ9H307 717 aaKnown RBP20.21■□□□□ 0.83
RPL13-210ENST00000562879 USP42Q9H9J4 1324 aaKnown RBP20.21■□□□□ 0.83
RPL13-210ENST00000562879 RTF1Q92541 710 aaKnown RBP20.2■□□□□ 0.82
RPL13-210ENST00000562879 NFE2L2Q16236 605 aa20.19■□□□□ 0.82
RPL13-210ENST00000562879 NLGN2Q8NFZ4 835 aa20.19■□□□□ 0.82
RPL13-210ENST00000562879 TEX13AQ9BXU3 409 aaPredicted RBP20.19■□□□□ 0.82
RPL13-210ENST00000562879 CHD4Q14839 1912 aa20.19■□□□□ 0.82
RPL13-210ENST00000562879 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
RPL13-210ENST00000562879 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
RPL13-210ENST00000562879 DCAF8L1A6NGE4 600 aa20.18■□□□□ 0.82
RPL13-210ENST00000562879 RFC4P35249 363 aa20.18■□□□□ 0.82
RPL13-210ENST00000562879 MCM10Q7L590 875 aa20.18■□□□□ 0.82
RPL13-210ENST00000562879 FMNL2Q96PY5 1086 aa20.18■□□□□ 0.82
RPL13-210ENST00000562879 COL15A1P39059 1388 aa20.18■□□□□ 0.82
RPL13-210ENST00000562879 LAMB4A4D0S4 1761 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms