RNA–Protein interactions for RNA: ENST00000562589.5

E4F1-202, Transcript of E4F transcription factor 1, humanhuman

TSL 5

Gene E4F1, Length 817 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-202ENST00000562589 PHACTR3Q96KR7 559 aa33.54■■■□□ 2.96
E4F1-202ENST00000562589 ADAMTS7Q9UKP4 1686 aa33.54■■■□□ 2.96
E4F1-202ENST00000562589 QSER1Q2KHR3 1735 aa33.53■■■□□ 2.96
E4F1-202ENST00000562589 SPON1Q9HCB6 807 aa33.52■■■□□ 2.96
E4F1-202ENST00000562589 TFCP2L1Q9NZI6 479 aa33.52■■■□□ 2.96
E4F1-202ENST00000562589 MRC1P22897 1456 aa33.51■■■□□ 2.96
E4F1-202ENST00000562589 SLC52A2Q9HAB3 445 aa33.51■■■□□ 2.95
E4F1-202ENST00000562589 VIRMAQ69YN4 1812 aaKnown RBP33.51■■■□□ 2.95
E4F1-202ENST00000562589 MAP3K5Q99683 1374 aa33.5■■■□□ 2.95
E4F1-202ENST00000562589 GNAT3A8MTJ3 354 aa33.49■■■□□ 2.95
E4F1-202ENST00000562589 PRKRIP1Q9H875 184 aaPredicted RBP33.49■■■□□ 2.95
E4F1-202ENST00000562589 PNPLA7Q6ZV29 1317 aa33.49■■■□□ 2.95
E4F1-202ENST00000562589 TUBGCP6Q96RT7 1819 aa33.48■■■□□ 2.95
E4F1-202ENST00000562589 ATP6V1AP38606 617 aa33.47■■■□□ 2.95
E4F1-202ENST00000562589 ZNF831Q5JPB2 1677 aa33.46■■■□□ 2.95
E4F1-202ENST00000562589 C4BP0C0L5 1744 aa33.46■■■□□ 2.95
E4F1-202ENST00000562589 ZBTB7AO95365 584 aa33.46■■■□□ 2.95
E4F1-202ENST00000562589 ITPK1Q13572 414 aa33.45■■■□□ 2.95
E4F1-202ENST00000562589 MTFR1LQ9H019 292 aa33.45■■■□□ 2.95
E4F1-202ENST00000562589 LINC00116Q8NCU8 138 aa33.44■■■□□ 2.94
E4F1-202ENST00000562589 SLC4A9Q96Q91 983 aa33.44■■■□□ 2.94
E4F1-202ENST00000562589 RBM42Q9BTD8 480 aaKnown RBP33.44■■■□□ 2.94
E4F1-202ENST00000562589 IL17REQ8NFR9 667 aa33.43■■■□□ 2.94
E4F1-202ENST00000562589 SLC16A10Q8TF71 515 aa33.42■■■□□ 2.94
E4F1-202ENST00000562589 AK7Q96M32 723 aa33.4■■■□□ 2.94
E4F1-202ENST00000562589 PLEKHF1Q96S99 279 aa33.4■■■□□ 2.94
E4F1-202ENST00000562589 ATF5Q9Y2D1 282 aaPredicted RBP33.4■■■□□ 2.94
E4F1-202ENST00000562589 CEMIPQ8WUJ3 1361 aa33.39■■■□□ 2.94
E4F1-202ENST00000562589 PTGER2P43116 358 aa33.39■■■□□ 2.94
E4F1-202ENST00000562589 PNNQ9H307 717 aaKnown RBP33.39■■■□□ 2.94
E4F1-202ENST00000562589 PTCD1O75127 700 aaKnown RBP33.38■■■□□ 2.93
E4F1-202ENST00000562589 FLAD1Q8NFF5 587 aa33.38■■■□□ 2.93
E4F1-202ENST00000562589 NEFMP07197 916 aa33.37■■■□□ 2.93
E4F1-202ENST00000562589 COL23A1Q86Y22 540 aaPredicted RBP33.37■■■□□ 2.93
E4F1-202ENST00000562589 TEFQ10587 303 aa33.36■■■□□ 2.93
E4F1-202ENST00000562589 UBR3Q6ZT12 1888 aa33.35■■■□□ 2.93
E4F1-202ENST00000562589 SGIP1Q9BQI5 828 aa33.35■■■□□ 2.93
E4F1-202ENST00000562589 HTATSF1O43719 755 aaKnown RBP33.34■■■□□ 2.93
E4F1-202ENST00000562589 SLC39A6Q13433 755 aa33.34■■■□□ 2.93
E4F1-202ENST00000562589 COL5A3P25940 1745 aaPredicted RBP33.33■■■□□ 2.93
E4F1-202ENST00000562589 CICQ96RK0 1608 aaPredicted RBP33.33■■■□□ 2.93
E4F1-202ENST00000562589 RTF1Q92541 710 aaKnown RBP33.33■■■□□ 2.93
E4F1-202ENST00000562589 PPP1R1BQ9UD71 204 aaPredicted RBP33.33■■■□□ 2.93
E4F1-202ENST00000562589 SIPA1L3O60292 1781 aaPredicted RBP33.33■■■□□ 2.93
E4F1-202ENST00000562589 RC3H1Q5TC82 1133 aaKnown RBP33.32■■■□□ 2.92
E4F1-202ENST00000562589 AMIGO3Q86WK7 504 aa33.32■■■□□ 2.92
E4F1-202ENST00000562589 MSH5O43196 834 aa33.31■■■□□ 2.92
E4F1-202ENST00000562589 SSFA2P28290 1259 aa33.31■■■□□ 2.92
E4F1-202ENST00000562589 CNTNAP4Q9C0A0 1308 aa33.3■■■□□ 2.92
E4F1-202ENST00000562589 KCPQ6ZWJ8 1503 aa33.3■■■□□ 2.92
E4F1-202ENST00000562589 GNPATO15228 680 aa33.3■■■□□ 2.92
E4F1-202ENST00000562589 COL24A1Q17RW2 1714 aa33.3■■■□□ 2.92
E4F1-202ENST00000562589 TJP1Q07157 1748 aa33.29■■■□□ 2.92
E4F1-202ENST00000562589 MAPK8IP3Q9UPT6 1336 aa33.28■■■□□ 2.92
E4F1-202ENST00000562589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.28■■■□□ 2.92
E4F1-202ENST00000562589 MCM10Q7L590 875 aa33.28■■■□□ 2.92
E4F1-202ENST00000562589 UBR2Q8IWV8 1755 aa33.28■■■□□ 2.92
E4F1-202ENST00000562589 NFE2L2Q16236 605 aa33.27■■■□□ 2.92
E4F1-202ENST00000562589 PHF14O94880 888 aa33.26■■■□□ 2.91
E4F1-202ENST00000562589 ZNF790Q6PG37 636 aa33.26■■■□□ 2.91
E4F1-202ENST00000562589 TTC5Q8N0Z6 440 aa33.26■■■□□ 2.91
E4F1-202ENST00000562589 VSIG10Q8N0Z9 540 aa33.26■■■□□ 2.91
E4F1-202ENST00000562589 WDR43Q15061 677 aaKnown RBP eCLIP33.25■■■□□ 2.91
E4F1-202ENST00000562589 SMIM5Q71RC9 77 aa33.25■■■□□ 2.91
E4F1-202ENST00000562589 DLG5Q8TDM6 1919 aa33.25■■■□□ 2.91
E4F1-202ENST00000562589 MYH14Q7Z406 1995 aaKnown RBP33.25■■■□□ 2.91
E4F1-202ENST00000562589 DCTN1Q14203 1278 aa33.24■■■□□ 2.91
E4F1-202ENST00000562589 RTCBQ9Y3I0 505 aaKnown RBP33.24■■■□□ 2.91
E4F1-202ENST00000562589 BTBD11A6QL63 1104 aa33.23■■■□□ 2.91
E4F1-202ENST00000562589 CRKLP46109 303 aaKnown RBP33.23■■■□□ 2.91
E4F1-202ENST00000562589 DNAJC10Q8IXB1 793 aa33.23■■■□□ 2.91
E4F1-202ENST00000562589 RPS6KA4O75676 772 aa33.22■■■□□ 2.91
E4F1-202ENST00000562589 POLD1P28340 1107 aa33.22■■■□□ 2.91
E4F1-202ENST00000562589 ARXQ96QS3 562 aa33.22■■■□□ 2.91
E4F1-202ENST00000562589 ADRA2BP18089 450 aa33.21■■■□□ 2.91
E4F1-202ENST00000562589 TRAPPC3LQ5T215 181 aa33.2■■■□□ 2.91
E4F1-202ENST00000562589 ZNF496Q96IT1 587 aaPredicted RBP33.2■■■□□ 2.91
E4F1-202ENST00000562589 ADAMTS8Q9UP79 889 aa33.2■■■□□ 2.91
E4F1-202ENST00000562589 CYP19A1P11511 503 aaPredicted RBP33.18■■■□□ 2.9
E4F1-202ENST00000562589 INTS5Q6P9B9 1019 aaKnown RBP33.18■■■□□ 2.9
E4F1-202ENST00000562589 MSL1Q68DK7 614 aa33.17■■■□□ 2.9
E4F1-202ENST00000562589 HEG1Q9ULI3 1381 aa33.17■■■□□ 2.9
E4F1-202ENST00000562589 TAF7Q15545 349 aaPredicted RBP33.16■■■□□ 2.9
E4F1-202ENST00000562589 RUNDC1Q96C34 613 aa33.16■■■□□ 2.9
E4F1-202ENST00000562589 FMNL2Q96PY5 1086 aa33.16■■■□□ 2.9
E4F1-202ENST00000562589 CCDC87Q9NVE4 849 aa33.16■■■□□ 2.9
E4F1-202ENST00000562589 ANP32CO43423 234 aa33.15■■■□□ 2.9
E4F1-202ENST00000562589 KCNQ3O43525 872 aa33.15■■■□□ 2.9
E4F1-202ENST00000562589 ARHGEF1Q92888 912 aaKnown RBP33.15■■■□□ 2.9
E4F1-202ENST00000562589 TMPOP42166 694 aaKnown RBP33.14■■■□□ 2.9
E4F1-202ENST00000562589 RIPK4P57078 832 aa33.14■■■□□ 2.9
E4F1-202ENST00000562589 CCDC146Q8IYE0 955 aa33.14■■■□□ 2.9
E4F1-202ENST00000562589 FHDC1Q9C0D6 1143 aaPredicted RBP33.14■■■□□ 2.9
E4F1-202ENST00000562589 TEX13AQ9BXU3 409 aaPredicted RBP33.13■■■□□ 2.89
E4F1-202ENST00000562589 STARD3NLO95772 234 aa33.11■■■□□ 2.89
E4F1-202ENST00000562589 SYT17Q9BSW7 474 aa33.11■■■□□ 2.89
E4F1-202ENST00000562589 RFC4P35249 363 aa33.1■■■□□ 2.89
E4F1-202ENST00000562589 THUMPD2Q9BTF0 503 aaKnown RBP33.1■■■□□ 2.89
E4F1-202ENST00000562589 LMOD3Q0VAK6 560 aa33.09■■■□□ 2.89
E4F1-202ENST00000562589 CCDC184Q52MB2 194 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms