RNA–Protein interactions for RNA: ENST00000562261.1

KLHDC4-208, Transcript of kelch domain containing 4, humanhuman

TSL 3

Gene KLHDC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-208ENST00000562261 KDRP35968 1356 aa20.67■□□□□ 0.9
KLHDC4-208ENST00000562261 GOLGB1Q14789 3259 aaKnown RBP20.66■□□□□ 0.9
KLHDC4-208ENST00000562261 ZNF530Q6P9A1 599 aaPredicted RBP20.66■□□□□ 0.9
KLHDC4-208ENST00000562261 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
KLHDC4-208ENST00000562261 ATG3Q9NT62 314 aa20.66■□□□□ 0.9
KLHDC4-208ENST00000562261 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
KLHDC4-208ENST00000562261 ERVV-2B6SEH9 535 aa20.65■□□□□ 0.9
KLHDC4-208ENST00000562261 MSL1Q68DK7 614 aa20.65■□□□□ 0.9
KLHDC4-208ENST00000562261 SULT6B1Q6IMI4 303 aa20.65■□□□□ 0.9
KLHDC4-208ENST00000562261 MTHFSP49914 203 aa20.64■□□□□ 0.89
KLHDC4-208ENST00000562261 CC2D1BQ5T0F9 858 aaKnown RBP20.64■□□□□ 0.89
KLHDC4-208ENST00000562261 AMIGO3Q86WK7 504 aa20.64■□□□□ 0.89
KLHDC4-208ENST00000562261 LINC00116Q8NCU8 138 aa20.64■□□□□ 0.89
KLHDC4-208ENST00000562261 ATP6V1AP38606 617 aa20.63■□□□□ 0.89
KLHDC4-208ENST00000562261 ITPK1Q13572 414 aa20.63■□□□□ 0.89
KLHDC4-208ENST00000562261 PHF14O94880 888 aa20.62■□□□□ 0.89
KLHDC4-208ENST00000562261 C1orf141Q5JVX7 400 aa20.62■□□□□ 0.89
KLHDC4-208ENST00000562261 ZNF831Q5JPB2 1677 aa20.61■□□□□ 0.89
KLHDC4-208ENST00000562261 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.61■□□□□ 0.89
KLHDC4-208ENST00000562261 SSFA2P28290 1259 aa20.61■□□□□ 0.89
KLHDC4-208ENST00000562261 NPC1L1Q9UHC9 1359 aa20.6■□□□□ 0.89
KLHDC4-208ENST00000562261 CABP4P57796 275 aa20.6■□□□□ 0.89
KLHDC4-208ENST00000562261 SMIM5Q71RC9 77 aa20.6■□□□□ 0.89
KLHDC4-208ENST00000562261 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
KLHDC4-208ENST00000562261 GNPATO15228 680 aa20.59■□□□□ 0.89
KLHDC4-208ENST00000562261 SCN11AQ9UI33 1791 aa20.58■□□□□ 0.89
KLHDC4-208ENST00000562261 COL5A3P25940 1745 aaPredicted RBP20.57■□□□□ 0.88
KLHDC4-208ENST00000562261 SLC4A9Q96Q91 983 aa20.57■□□□□ 0.88
KLHDC4-208ENST00000562261 RBM42Q9BTD8 480 aaKnown RBP20.57■□□□□ 0.88
KLHDC4-208ENST00000562261 DIAPH1O60610 1272 aaKnown RBP20.56■□□□□ 0.88
KLHDC4-208ENST00000562261 HMOX1P09601 288 aa20.55■□□□□ 0.88
KLHDC4-208ENST00000562261 AKAP4Q5JQC9 854 aa20.55■□□□□ 0.88
KLHDC4-208ENST00000562261 NFATC2IPQ8NCF5 419 aa20.55■□□□□ 0.88
KLHDC4-208ENST00000562261 CNGB1Q14028 1251 aaPredicted RBP20.54■□□□□ 0.88
KLHDC4-208ENST00000562261 COL3A1P02461 1466 aaPredicted RBP20.54■□□□□ 0.88
KLHDC4-208ENST00000562261 CD2APQ9Y5K6 639 aa20.53■□□□□ 0.88
KLHDC4-208ENST00000562261 RC3H1Q5TC82 1133 aaKnown RBP20.52■□□□□ 0.88
KLHDC4-208ENST00000562261 RTCBQ9Y3I0 505 aaKnown RBP20.52■□□□□ 0.88
KLHDC4-208ENST00000562261 VIRMAQ69YN4 1812 aaKnown RBP20.52■□□□□ 0.88
KLHDC4-208ENST00000562261 CNTNAP4Q9C0A0 1308 aa20.52■□□□□ 0.87
KLHDC4-208ENST00000562261 GRIN3BO60391 1043 aa20.51■□□□□ 0.87
KLHDC4-208ENST00000562261 YBX3P16989 372 aaKnown RBP eCLIP20.51■□□□□ 0.87
KLHDC4-208ENST00000562261 MRC1P22897 1456 aa20.5■□□□□ 0.87
KLHDC4-208ENST00000562261 CICQ96RK0 1608 aaPredicted RBP20.5■□□□□ 0.87
KLHDC4-208ENST00000562261 PTCD1O75127 700 aaKnown RBP20.5■□□□□ 0.87
KLHDC4-208ENST00000562261 TRAPPC3LQ5T215 181 aa20.5■□□□□ 0.87
KLHDC4-208ENST00000562261 MYH14Q7Z406 1995 aaKnown RBP20.5■□□□□ 0.87
KLHDC4-208ENST00000562261 ADRA2BP18089 450 aa20.49■□□□□ 0.87
KLHDC4-208ENST00000562261 MTHFSDQ2M296 383 aaKnown RBP20.49■□□□□ 0.87
KLHDC4-208ENST00000562261 SLC52A2Q9HAB3 445 aa20.49■□□□□ 0.87
KLHDC4-208ENST00000562261 LGR6Q9HBX8 967 aa20.49■□□□□ 0.87
KLHDC4-208ENST00000562261 ATP10DQ9P241 1426 aa20.49■□□□□ 0.87
KLHDC4-208ENST00000562261 TJP1Q07157 1748 aa20.49■□□□□ 0.87
KLHDC4-208ENST00000562261 ADAMTS7Q9UKP4 1686 aa20.48■□□□□ 0.87
KLHDC4-208ENST00000562261 RNMTO43148 476 aaKnown RBP20.48■□□□□ 0.87
KLHDC4-208ENST00000562261 GPBP1L1Q9HC44 474 aaPredicted RBP20.48■□□□□ 0.87
KLHDC4-208ENST00000562261 RPS6KA4O75676 772 aa20.47■□□□□ 0.87
KLHDC4-208ENST00000562261 HSPA6P17066 643 aa20.47■□□□□ 0.87
KLHDC4-208ENST00000562261 ARHGEF1Q92888 912 aaKnown RBP20.47■□□□□ 0.87
KLHDC4-208ENST00000562261 C4AP0C0L4 1744 aa20.47■□□□□ 0.87
KLHDC4-208ENST00000562261 U2SURPO15042 1029 aaKnown RBP20.46■□□□□ 0.87
KLHDC4-208ENST00000562261 MMP10P09238 476 aa20.45■□□□□ 0.86
KLHDC4-208ENST00000562261 CRKLP46109 303 aaKnown RBP20.45■□□□□ 0.86
KLHDC4-208ENST00000562261 ZNF526Q8TF50 670 aaPredicted RBP20.45■□□□□ 0.86
KLHDC4-208ENST00000562261 RFC4P35249 363 aa20.44■□□□□ 0.86
KLHDC4-208ENST00000562261 NLGN1Q8N2Q7 840 aa20.43■□□□□ 0.86
KLHDC4-208ENST00000562261 GYS1P13807 737 aa20.42■□□□□ 0.86
KLHDC4-208ENST00000562261 SLC39A6Q13433 755 aa20.42■□□□□ 0.86
KLHDC4-208ENST00000562261 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
KLHDC4-208ENST00000562261 KCPQ6ZWJ8 1503 aa20.42■□□□□ 0.86
KLHDC4-208ENST00000562261 KIF13BQ9NQT8 1826 aa20.41■□□□□ 0.86
KLHDC4-208ENST00000562261 DNAJC10Q8IXB1 793 aa20.4■□□□□ 0.86
KLHDC4-208ENST00000562261 GAS2L2Q8NHY3 880 aa20.4■□□□□ 0.86
KLHDC4-208ENST00000562261 UBR2Q8IWV8 1755 aa20.39■□□□□ 0.86
KLHDC4-208ENST00000562261 INTS5Q6P9B9 1019 aaKnown RBP20.39■□□□□ 0.85
KLHDC4-208ENST00000562261 C10orf71Q711Q0 1435 aa20.38■□□□□ 0.85
KLHDC4-208ENST00000562261 USP42Q9H9J4 1324 aaKnown RBP20.38■□□□□ 0.85
KLHDC4-208ENST00000562261 GNAT3A8MTJ3 354 aa20.38■□□□□ 0.85
KLHDC4-208ENST00000562261 PPP2R1AP30153 589 aa20.38■□□□□ 0.85
KLHDC4-208ENST00000562261 KIAA1551Q9HCM1 1747 aa20.37■□□□□ 0.85
KLHDC4-208ENST00000562261 CCDC87Q9NVE4 849 aa20.37■□□□□ 0.85
KLHDC4-208ENST00000562261 SRP68Q9UHB9 627 aaKnown RBP20.37■□□□□ 0.85
KLHDC4-208ENST00000562261 WWC3Q9ULE0 1092 aa20.37■□□□□ 0.85
KLHDC4-208ENST00000562261 PXDNLA1KZ92 1463 aa20.37■□□□□ 0.85
KLHDC4-208ENST00000562261 CYP19A1P11511 503 aaPredicted RBP20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 PRKAR2BP31323 418 aa20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 VSIG10Q8N0Z9 540 aa20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 IL17REQ8NFR9 667 aa20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 NUDCQ9Y266 331 aa20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 SIPA1L3O60292 1781 aaPredicted RBP20.36■□□□□ 0.85
KLHDC4-208ENST00000562261 SOS1Q07889 1333 aaPredicted RBP20.35■□□□□ 0.85
KLHDC4-208ENST00000562261 TGFB2P61812 414 aa20.35■□□□□ 0.85
KLHDC4-208ENST00000562261 TTC5Q8N0Z6 440 aa20.35■□□□□ 0.85
KLHDC4-208ENST00000562261 N4BP2Q86UW6 1770 aaPredicted RBP20.35■□□□□ 0.85
KLHDC4-208ENST00000562261 TEFQ10587 303 aa20.34■□□□□ 0.85
KLHDC4-208ENST00000562261 FKBP8Q14318 412 aa20.34■□□□□ 0.85
KLHDC4-208ENST00000562261 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
KLHDC4-208ENST00000562261 ADCY9O60503 1353 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms