RNA–Protein interactions for RNA: ENST00000562075.6

CNN2-204, Transcript of calponin 2, humanhuman

TSL 1 (best)

Gene CNN2, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-204ENST00000562075 NGLY1Q96IV0 654 aa18.32■□□□□ 0.52
CNN2-204ENST00000562075 MRC1P22897 1456 aa18.32■□□□□ 0.52
CNN2-204ENST00000562075 SPATA31A1Q5TZJ5 1347 aa18.31■□□□□ 0.52
CNN2-204ENST00000562075 DDX54Q8TDD1 881 aaKnown RBP18.31■□□□□ 0.52
CNN2-204ENST00000562075 SLC52A2Q9HAB3 445 aa18.31■□□□□ 0.52
CNN2-204ENST00000562075 THRAP3Q9Y2W1 955 aaKnown RBP18.31■□□□□ 0.52
CNN2-204ENST00000562075 SOS1Q07889 1333 aaPredicted RBP18.3■□□□□ 0.52
CNN2-204ENST00000562075 IPO8O15397 1037 aaKnown RBP18.3■□□□□ 0.52
CNN2-204ENST00000562075 BRPF1P55201 1214 aaPredicted RBP18.3■□□□□ 0.52
CNN2-204ENST00000562075 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
CNN2-204ENST00000562075 MRPL50Q8N5N7 158 aaKnown RBP18.3■□□□□ 0.52
CNN2-204ENST00000562075 CCDC9Q9Y3X0 531 aaKnown RBP18.3■□□□□ 0.52
CNN2-204ENST00000562075 SPATA31A5Q5VU36 1347 aa18.29■□□□□ 0.52
CNN2-204ENST00000562075 SPATA31A7Q8IWB4 1347 aa18.29■□□□□ 0.52
CNN2-204ENST00000562075 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
CNN2-204ENST00000562075 MS4A1P11836 297 aa18.29■□□□□ 0.52
CNN2-204ENST00000562075 MEX3CQ5U5Q3 659 aaKnown RBP18.29■□□□□ 0.52
CNN2-204ENST00000562075 CDCA7Q9BWT1 371 aaPredicted RBP18.29■□□□□ 0.52
CNN2-204ENST00000562075 NOB1Q9ULX3 412 aaKnown RBP18.29■□□□□ 0.52
CNN2-204ENST00000562075 EIF4A1P60842 406 aaKnown RBP18.28■□□□□ 0.52
CNN2-204ENST00000562075 NKX1-1Q15270 411 aaPredicted RBP18.28■□□□□ 0.52
CNN2-204ENST00000562075 PANK1Q8TE04 598 aa18.28■□□□□ 0.52
CNN2-204ENST00000562075 KCNQ3O43525 872 aa18.27■□□□□ 0.52
CNN2-204ENST00000562075 CABP4P57796 275 aa18.27■□□□□ 0.52
CNN2-204ENST00000562075 ATF7IPQ6VMQ6 1270 aa18.27■□□□□ 0.52
CNN2-204ENST00000562075 FTSJ3Q8IY81 847 aaKnown RBP18.27■□□□□ 0.52
CNN2-204ENST00000562075 DZIP1LQ8IYY4 767 aaKnown RBP18.27■□□□□ 0.52
CNN2-204ENST00000562075 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
CNN2-204ENST00000562075 TNS2Q63HR2 1409 aa18.26■□□□□ 0.51
CNN2-204ENST00000562075 NFATC2IPQ8NCF5 419 aa18.26■□□□□ 0.51
CNN2-204ENST00000562075 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
CNN2-204ENST00000562075 BCL9LQ86UU0 1499 aa18.26■□□□□ 0.51
CNN2-204ENST00000562075 ERVV-2B6SEH9 535 aa18.25■□□□□ 0.51
CNN2-204ENST00000562075 EXOC5O00471 708 aa18.25■□□□□ 0.51
CNN2-204ENST00000562075 TRIM27P14373 513 aa18.25■□□□□ 0.51
CNN2-204ENST00000562075 VPS72Q15906 364 aa18.25■□□□□ 0.51
CNN2-204ENST00000562075 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
CNN2-204ENST00000562075 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
CNN2-204ENST00000562075 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.25■□□□□ 0.51
CNN2-204ENST00000562075 HOXB7P09629 217 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 RLBP1P12271 317 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 BARGINQ6ZT62 677 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 ARHGAP45Q92619 1136 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 CCDC136Q96JN2 1154 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 STK31Q9BXU1 1019 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 COG6Q9Y2V7 657 aa18.24■□□□□ 0.51
CNN2-204ENST00000562075 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
CNN2-204ENST00000562075 USP21Q9UK80 565 aa18.23■□□□□ 0.51
CNN2-204ENST00000562075 SLC39A6Q13433 755 aa18.22■□□□□ 0.51
CNN2-204ENST00000562075 HDGFL1Q5TGJ6 251 aa18.22■□□□□ 0.51
CNN2-204ENST00000562075 ZNF790Q6PG37 636 aa18.22■□□□□ 0.51
CNN2-204ENST00000562075 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
CNN2-204ENST00000562075 API5Q9BZZ5 524 aaKnown RBP18.22■□□□□ 0.51
CNN2-204ENST00000562075 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
CNN2-204ENST00000562075 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
CNN2-204ENST00000562075 DDB1Q16531 1140 aa18.21■□□□□ 0.51
CNN2-204ENST00000562075 NECTIN2Q92692 538 aa18.21■□□□□ 0.51
CNN2-204ENST00000562075 HEG1Q9ULI3 1381 aa18.2■□□□□ 0.5
CNN2-204ENST00000562075 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
CNN2-204ENST00000562075 PTPRCP08575 1304 aa18.2■□□□□ 0.5
CNN2-204ENST00000562075 EIF2S2P20042 333 aaKnown RBP18.19■□□□□ 0.5
CNN2-204ENST00000562075 AFF2P51816 1311 aa18.19■□□□□ 0.5
CNN2-204ENST00000562075 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
CNN2-204ENST00000562075 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
CNN2-204ENST00000562075 TMEM57Q8N5G2 664 aa18.18■□□□□ 0.5
CNN2-204ENST00000562075 TMOD3Q9NYL9 352 aa18.18■□□□□ 0.5
CNN2-204ENST00000562075 PAPPAQ13219 1627 aa18.18■□□□□ 0.5
CNN2-204ENST00000562075 AAMPQ13685 434 aa18.17■□□□□ 0.5
CNN2-204ENST00000562075 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
CNN2-204ENST00000562075 FMNL2Q96PY5 1086 aa18.17■□□□□ 0.5
CNN2-204ENST00000562075 ABCC4O15439 1325 aa18.17■□□□□ 0.5
CNN2-204ENST00000562075 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
CNN2-204ENST00000562075 C5P01031 1676 aa18.16■□□□□ 0.5
CNN2-204ENST00000562075 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
CNN2-204ENST00000562075 DDX19BQ9UMR2 479 aa18.16■□□□□ 0.5
CNN2-204ENST00000562075 G2E3Q7L622 706 aa18.15■□□□□ 0.5
CNN2-204ENST00000562075 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
CNN2-204ENST00000562075 RGS12O14924 1447 aa18.15■□□□□ 0.5
CNN2-204ENST00000562075 UBR2Q8IWV8 1755 aa18.14■□□□□ 0.5
CNN2-204ENST00000562075 ITGB4P16144 1822 aa18.14■□□□□ 0.5
CNN2-204ENST00000562075 A0A0G2JS52 829 aa18.14■□□□□ 0.49
CNN2-204ENST00000562075 SNRPA1P09661 255 aaKnown RBP18.14■□□□□ 0.49
CNN2-204ENST00000562075 MYT1Q01538 1121 aa18.14■□□□□ 0.49
CNN2-204ENST00000562075 FLIIQ13045 1269 aa18.14■□□□□ 0.49
CNN2-204ENST00000562075 CHPF2Q9P2E5 772 aa18.14■□□□□ 0.49
CNN2-204ENST00000562075 ATRNO75882 1429 aa18.14■□□□□ 0.49
CNN2-204ENST00000562075 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
CNN2-204ENST00000562075 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
CNN2-204ENST00000562075 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
CNN2-204ENST00000562075 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
CNN2-204ENST00000562075 GLI3P10071 1580 aa18.13■□□□□ 0.49
CNN2-204ENST00000562075 THSD7AQ9UPZ6 1657 aa18.12■□□□□ 0.49
CNN2-204ENST00000562075 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
CNN2-204ENST00000562075 FKBP5Q13451 457 aaPredicted RBP18.12■□□□□ 0.49
CNN2-204ENST00000562075 PELP1Q8IZL8 1130 aaKnown RBP18.12■□□□□ 0.49
CNN2-204ENST00000562075 PIGBQ92521 554 aa18.12■□□□□ 0.49
CNN2-204ENST00000562075 CHMP4BQ9H444 224 aaKnown RBP18.12■□□□□ 0.49
CNN2-204ENST00000562075 TRPC5Q9UL62 973 aaPredicted RBP18.12■□□□□ 0.49
CNN2-204ENST00000562075 GJD4Q96KN9 370 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms