RNA–Protein interactions for RNA: ENST00000562015.5

CNN2-203, Transcript of calponin 2, humanhuman

TSL 4

Gene CNN2, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-203ENST00000562015 SCN11AQ9UI33 1791 aa19.7■□□□□ 0.74
CNN2-203ENST00000562015 ITPK1Q13572 414 aa19.7■□□□□ 0.74
CNN2-203ENST00000562015 COL23A1Q86Y22 540 aaPredicted RBP19.7■□□□□ 0.74
CNN2-203ENST00000562015 LINC00116Q8NCU8 138 aa19.7■□□□□ 0.74
CNN2-203ENST00000562015 QSER1Q2KHR3 1735 aa19.7■□□□□ 0.74
CNN2-203ENST00000562015 U2AF1L5P0DN76 240 aaPredicted RBP19.69■□□□□ 0.74
CNN2-203ENST00000562015 U2AF1Q01081 240 aaKnown RBP eCLIP19.69■□□□□ 0.74
CNN2-203ENST00000562015 AK7Q96M32 723 aa19.69■□□□□ 0.74
CNN2-203ENST00000562015 NUDCQ9Y266 331 aa19.69■□□□□ 0.74
CNN2-203ENST00000562015 C4BP0C0L5 1744 aa19.68■□□□□ 0.74
CNN2-203ENST00000562015 RNMTO43148 476 aaKnown RBP19.68■□□□□ 0.74
CNN2-203ENST00000562015 PTCD1O75127 700 aaKnown RBP19.68■□□□□ 0.74
CNN2-203ENST00000562015 PHF14O94880 888 aa19.68■□□□□ 0.74
CNN2-203ENST00000562015 PRKAR2BP31323 418 aa19.67■□□□□ 0.74
CNN2-203ENST00000562015 MSL1Q68DK7 614 aa19.67■□□□□ 0.74
CNN2-203ENST00000562015 AMIGO3Q86WK7 504 aa19.67■□□□□ 0.74
CNN2-203ENST00000562015 PHACTR3Q96KR7 559 aa19.66■□□□□ 0.74
CNN2-203ENST00000562015 SLC4A9Q96Q91 983 aa19.66■□□□□ 0.74
CNN2-203ENST00000562015 SGIP1Q9BQI5 828 aa19.66■□□□□ 0.74
CNN2-203ENST00000562015 KLHL34Q8N239 644 aa19.65■□□□□ 0.74
CNN2-203ENST00000562015 SLC16A10Q8TF71 515 aa19.65■□□□□ 0.74
CNN2-203ENST00000562015 SLC39A6Q13433 755 aa19.64■□□□□ 0.73
CNN2-203ENST00000562015 ARXQ96QS3 562 aa19.64■□□□□ 0.73
CNN2-203ENST00000562015 FHDC1Q9C0D6 1143 aaPredicted RBP19.64■□□□□ 0.73
CNN2-203ENST00000562015 RSPH6AQ9H0K4 717 aa19.64■□□□□ 0.73
CNN2-203ENST00000562015 SLC52A2Q9HAB3 445 aa19.64■□□□□ 0.73
CNN2-203ENST00000562015 UBR3Q6ZT12 1888 aa19.64■□□□□ 0.73
CNN2-203ENST00000562015 GNPATO15228 680 aa19.63■□□□□ 0.73
CNN2-203ENST00000562015 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.62■□□□□ 0.73
CNN2-203ENST00000562015 HMGB2P26583 209 aaKnown RBP19.62■□□□□ 0.73
CNN2-203ENST00000562015 POLD1P28340 1107 aa19.62■□□□□ 0.73
CNN2-203ENST00000562015 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
CNN2-203ENST00000562015 GAS2L2Q8NHY3 880 aa19.62■□□□□ 0.73
CNN2-203ENST00000562015 GNAT3A8MTJ3 354 aa19.61■□□□□ 0.73
CNN2-203ENST00000562015 FLAD1Q8NFF5 587 aa19.61■□□□□ 0.73
CNN2-203ENST00000562015 IL17REQ8NFR9 667 aa19.6■□□□□ 0.73
CNN2-203ENST00000562015 MAP3K5Q99683 1374 aa19.59■□□□□ 0.73
CNN2-203ENST00000562015 MYH14Q7Z406 1995 aaKnown RBP19.59■□□□□ 0.73
CNN2-203ENST00000562015 SYT17Q9BSW7 474 aa19.59■□□□□ 0.73
CNN2-203ENST00000562015 FCHSD2O94868 740 aa19.58■□□□□ 0.72
CNN2-203ENST00000562015 RALBP1Q15311 655 aa19.58■□□□□ 0.72
CNN2-203ENST00000562015 SSFA2P28290 1259 aa19.57■□□□□ 0.72
CNN2-203ENST00000562015 TEFQ10587 303 aa19.57■□□□□ 0.72
CNN2-203ENST00000562015 COL5A3P25940 1745 aaPredicted RBP19.56■□□□□ 0.72
CNN2-203ENST00000562015 RTCBQ9Y3I0 505 aaKnown RBP19.56■□□□□ 0.72
CNN2-203ENST00000562015 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
CNN2-203ENST00000562015 DNAJC10Q8IXB1 793 aa19.55■□□□□ 0.72
CNN2-203ENST00000562015 ADAMTS7Q9UKP4 1686 aa19.55■□□□□ 0.72
CNN2-203ENST00000562015 MRC1P22897 1456 aa19.54■□□□□ 0.72
CNN2-203ENST00000562015 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
CNN2-203ENST00000562015 CRKLP46109 303 aaKnown RBP19.54■□□□□ 0.72
CNN2-203ENST00000562015 DCTN1Q14203 1278 aa19.54■□□□□ 0.72
CNN2-203ENST00000562015 TRAPPC3LQ5T215 181 aa19.54■□□□□ 0.72
CNN2-203ENST00000562015 RC3H1Q5TC82 1133 aaKnown RBP19.54■□□□□ 0.72
CNN2-203ENST00000562015 MCM10Q7L590 875 aa19.54■□□□□ 0.72
CNN2-203ENST00000562015 ZNF831Q5JPB2 1677 aa19.54■□□□□ 0.72
CNN2-203ENST00000562015 TJP1Q07157 1748 aa19.54■□□□□ 0.72
CNN2-203ENST00000562015 ARHGEF1Q92888 912 aaKnown RBP19.53■□□□□ 0.72
CNN2-203ENST00000562015 CNTNAP4Q9C0A0 1308 aa19.52■□□□□ 0.72
CNN2-203ENST00000562015 RPS6KA4O75676 772 aa19.52■□□□□ 0.72
CNN2-203ENST00000562015 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.72
CNN2-203ENST00000562015 RTF1Q92541 710 aaKnown RBP19.52■□□□□ 0.72
CNN2-203ENST00000562015 DLG5Q8TDM6 1919 aa19.51■□□□□ 0.71
CNN2-203ENST00000562015 NEFMP07197 916 aa19.51■□□□□ 0.71
CNN2-203ENST00000562015 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
CNN2-203ENST00000562015 SIPA1L3O60292 1781 aaPredicted RBP19.5■□□□□ 0.71
CNN2-203ENST00000562015 KCNQ3O43525 872 aa19.5■□□□□ 0.71
CNN2-203ENST00000562015 RFC4P35249 363 aa19.5■□□□□ 0.71
CNN2-203ENST00000562015 INTS5Q6P9B9 1019 aaKnown RBP19.5■□□□□ 0.71
CNN2-203ENST00000562015 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
CNN2-203ENST00000562015 NLGN2Q8NFZ4 835 aa19.5■□□□□ 0.71
CNN2-203ENST00000562015 KCPQ6ZWJ8 1503 aa19.5■□□□□ 0.71
CNN2-203ENST00000562015 BTBD11A6QL63 1104 aa19.49■□□□□ 0.71
CNN2-203ENST00000562015 ZNF790Q6PG37 636 aa19.49■□□□□ 0.71
CNN2-203ENST00000562015 CYP19A1P11511 503 aaPredicted RBP19.48■□□□□ 0.71
CNN2-203ENST00000562015 ZNF496Q96IT1 587 aaPredicted RBP19.48■□□□□ 0.71
CNN2-203ENST00000562015 PLEKHF1Q96S99 279 aa19.48■□□□□ 0.71
CNN2-203ENST00000562015 CCDC87Q9NVE4 849 aa19.48■□□□□ 0.71
CNN2-203ENST00000562015 SRP68Q9UHB9 627 aaKnown RBP19.48■□□□□ 0.71
CNN2-203ENST00000562015 CEMIPQ8WUJ3 1361 aa19.47■□□□□ 0.71
CNN2-203ENST00000562015 UBR2Q8IWV8 1755 aa19.47■□□□□ 0.71
CNN2-203ENST00000562015 MMP10P09238 476 aa19.46■□□□□ 0.71
CNN2-203ENST00000562015 ADRA2BP18089 450 aa19.46■□□□□ 0.71
CNN2-203ENST00000562015 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
CNN2-203ENST00000562015 C4AP0C0L4 1744 aa19.45■□□□□ 0.7
CNN2-203ENST00000562015 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
CNN2-203ENST00000562015 GPR162Q16538 588 aa19.45■□□□□ 0.7
CNN2-203ENST00000562015 PRKRIP1Q9H875 184 aaPredicted RBP19.45■□□□□ 0.7
CNN2-203ENST00000562015 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
CNN2-203ENST00000562015 ZBTB1Q9Y2K1 713 aa19.45■□□□□ 0.7
CNN2-203ENST00000562015 GYS1P13807 737 aa19.44■□□□□ 0.7
CNN2-203ENST00000562015 NFE2L2Q16236 605 aa19.44■□□□□ 0.7
CNN2-203ENST00000562015 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
CNN2-203ENST00000562015 VSIG10Q8N0Z9 540 aa19.44■□□□□ 0.7
CNN2-203ENST00000562015 THUMPD2Q9BTF0 503 aaKnown RBP19.44■□□□□ 0.7
CNN2-203ENST00000562015 PNNQ9H307 717 aaKnown RBP19.44■□□□□ 0.7
CNN2-203ENST00000562015 ZNF316A6NFI3 1004 aaPredicted RBP19.43■□□□□ 0.7
CNN2-203ENST00000562015 HTATSF1O43719 755 aaKnown RBP19.43■□□□□ 0.7
CNN2-203ENST00000562015 STARD3NLO95772 234 aa19.43■□□□□ 0.7
CNN2-203ENST00000562015 FMNL2Q96PY5 1086 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms