RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	CDC42BPA	Q5VT25	1732 aa		11.23	□□□□□ -0.61
MARK3-223	ENST00000561071	FER1L4	A9Z1Z3	1794 aa		11.22	□□□□□ -0.61
MARK3-223	ENST00000561071	PIK3CD	O00329	1044 aa		11.22	□□□□□ -0.61
MARK3-223	ENST00000561071	MCCD1	P59942	119 aa	Predicted RBP	11.22	□□□□□ -0.61
MARK3-223	ENST00000561071	KCTD15	Q96SI1	283 aa	Predicted RBP	11.22	□□□□□ -0.61
MARK3-223	ENST00000561071	CFDP1	Q9UEE9	299 aa	Predicted RBP	11.22	□□□□□ -0.61
MARK3-223	ENST00000561071	MLH3	Q9UHC1	1453 aa		11.22	□□□□□ -0.61
MARK3-223	ENST00000561071	ABCA6	Q8N139	1617 aa		11.21	□□□□□ -0.61
MARK3-223	ENST00000561071	CEP162	Q5TB80	1403 aa		11.21	□□□□□ -0.61
MARK3-223	ENST00000561071	MTUS2	Q5JR59	1369 aa		11.21	□□□□□ -0.61
MARK3-223	ENST00000561071	ZNF644	Q9H582	1327 aa	Predicted RBP	11.21	□□□□□ -0.61
MARK3-223	ENST00000561071	NBPF20	Q3BBV1	942 aa		11.21	□□□□□ -0.61
MARK3-223	ENST00000561071	ZNF592	Q92610	1267 aa		11.21	□□□□□ -0.61
MARK3-223	ENST00000561071	MAP4K5	Q9Y4K4	846 aa		11.21	□□□□□ -0.61
MARK3-223	ENST00000561071	CCNB3	Q8WWL7	1395 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	ALDH1A1	P00352	501 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	GRM5	P41594	1212 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	RAB15	P59190	212 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	MPND	Q8N594	471 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	ARID3A	Q99856	593 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	CDV3	Q9UKY7	258 aa	Known RBP	11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	ITSN2	Q9NZM3	1697 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	SAMD9L	Q8IVG5	1584 aa		11.2	□□□□□ -0.62
MARK3-223	ENST00000561071	SPAG9	O60271	1321 aa	Known RBP	11.19	□□□□□ -0.62
MARK3-223	ENST00000561071	FSHR	P23945	695 aa		11.19	□□□□□ -0.62
MARK3-223	ENST00000561071	PHTF2	Q8N3S3	785 aa		11.19	□□□□□ -0.62
MARK3-223	ENST00000561071	SNIP1	Q8TAD8	396 aa	Known RBP	11.19	□□□□□ -0.62
MARK3-223	ENST00000561071	SYCP2	Q9BX26	1530 aa		11.19	□□□□□ -0.62
MARK3-223	ENST00000561071	ESPN	B1AK53	854 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071		J3QL48	77 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	ADH1C	P00326	375 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	PRR20E	P86478	221 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	PRR20C	P86479	221 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	PRR20D	P86480	221 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	PRR20B	P86481	221 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	PRR20A	P86496	221 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	TSGA10IP	Q3SY00	556 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	SLFNL1	Q499Z3	407 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	INTS6L	Q5JSJ4	861 aa	Known RBP	11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	TBC1D9	Q6ZT07	1266 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	CYP4X1	Q8N118	509 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	CCDC97	Q96F63	343 aa	Predicted RBP	11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	TOR4A	Q9NXH8	423 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	KIDINS220	Q9ULH0	1771 aa		11.18	□□□□□ -0.62
MARK3-223	ENST00000561071	TTC24	A2A3L6	582 aa	Predicted RBP	11.17	□□□□□ -0.62
MARK3-223	ENST00000561071	RNF135	Q8IUD6	432 aa		11.17	□□□□□ -0.62
MARK3-223	ENST00000561071	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.16	□□□□□ -0.62
MARK3-223	ENST00000561071	ESF1	Q9H501	851 aa	Known RBP	11.16	□□□□□ -0.62
MARK3-223	ENST00000561071	PDZRN3	Q9UPQ7	1066 aa		11.16	□□□□□ -0.62
MARK3-223	ENST00000561071	PALM3	A6NDB9	673 aa	Predicted RBP	11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	NR3C2	P08235	984 aa		11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	SKI	P12755	728 aa		11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	FBXO41	Q8TF61	875 aa		11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	PPP1R12C	Q9BZL4	782 aa		11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	TFIP11	Q9UBB9	837 aa	Known RBP	11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	SERPINA10	Q9UK55	444 aa		11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	RERE	Q9P2R6	1566 aa		11.15	□□□□□ -0.62
MARK3-223	ENST00000561071	AGL	P35573	1532 aa		11.14	□□□□□ -0.63
MARK3-223	ENST00000561071	WASF2	Q9Y6W5	498 aa		11.14	□□□□□ -0.63
MARK3-223	ENST00000561071	KIAA1107	Q9UPP5	1409 aa		11.14	□□□□□ -0.63
MARK3-223	ENST00000561071	TIAM1	Q13009	1591 aa		11.13	□□□□□ -0.63
MARK3-223	ENST00000561071	SMPD1	P17405	629 aa		11.13	□□□□□ -0.63
MARK3-223	ENST00000561071	NR5A1	Q13285	461 aa		11.13	□□□□□ -0.63
MARK3-223	ENST00000561071	SEPT12	Q8IYM1	358 aa		11.13	□□□□□ -0.63
MARK3-223	ENST00000561071	PLEKHH2	Q8IVE3	1493 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	ERVH48-1	M5A8F1	160 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	ATP9B	O43861	1147 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	NNT	Q13423	1086 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	CFAP70	Q5T0N1	1121 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	RNF20	Q5VTR2	975 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	GGT6	Q6P531	493 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	PLPP7	Q8NBV4	271 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	TMPRSS4	Q9NRS4	437 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	CHIC2	Q9UKJ5	165 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	ATP7A	Q04656	1500 aa		11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	SUPT6H	Q7KZ85	1726 aa	Known RBP	11.12	□□□□□ -0.63
MARK3-223	ENST00000561071	C3	P01024	1663 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	UHRF1BP1	Q6BDS2	1440 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	EHBP1L1	Q8N3D4	1523 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	RFX1	P22670	979 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	CCDC116	Q8IYX3	515 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	DEPDC4	Q8N2C3	294 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	PCDHB11	Q9Y5F2	797 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	A2M	P01023	1474 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	MBD5	Q9P267	1494 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	PREX1	Q8TCU6	1659 aa		11.11	□□□□□ -0.63
MARK3-223	ENST00000561071	USP17L5	A8MUK1	530 aa		11.1	□□□□□ -0.63
MARK3-223	ENST00000561071	LMOD1	P29536	600 aa	Predicted RBP	11.1	□□□□□ -0.63
MARK3-223	ENST00000561071	TRAF7	Q6Q0C0	670 aa		11.1	□□□□□ -0.63
MARK3-223	ENST00000561071	NFATC2IP	Q8NCF5	419 aa		11.1	□□□□□ -0.63
MARK3-223	ENST00000561071	ZMYM3	Q14202	1370 aa		11.1	□□□□□ -0.63
MARK3-223	ENST00000561071	NCOA2	Q15596	1464 aa		11.1	□□□□□ -0.63
MARK3-223	ENST00000561071	INO80	Q9ULG1	1556 aa	Predicted RBP	11.09	□□□□□ -0.63
MARK3-223	ENST00000561071	KANK4	Q5T7N3	995 aa	Predicted RBP	11.09	□□□□□ -0.63
MARK3-223	ENST00000561071	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.09	□□□□□ -0.63
MARK3-223	ENST00000561071	DOLK	Q9UPQ8	538 aa		11.09	□□□□□ -0.63
MARK3-223	ENST00000561071	USP17L3	A6NCW0	530 aa		11.08	□□□□□ -0.64
MARK3-223	ENST00000561071	USP17L4	A6NCW7	530 aa		11.08	□□□□□ -0.64

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