RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-208ENST00000561059 RBM42Q9BTD8 480 aaKnown RBP18.36■□□□□ 0.53
PSME1-208ENST00000561059 CD2APQ9Y5K6 639 aa18.35■□□□□ 0.53
PSME1-208ENST00000561059 UBR3Q6ZT12 1888 aa18.35■□□□□ 0.53
PSME1-208ENST00000561059 SSFA2P28290 1259 aa18.34■□□□□ 0.53
PSME1-208ENST00000561059 PLEKHO1Q53GL0 409 aaPredicted RBP18.34■□□□□ 0.53
PSME1-208ENST00000561059 KDM6AO15550 1401 aaPredicted RBP18.33■□□□□ 0.53
PSME1-208ENST00000561059 GRIN3BO60391 1043 aa18.33■□□□□ 0.52
PSME1-208ENST00000561059 C1QTNF8P60827 252 aa18.33■□□□□ 0.52
PSME1-208ENST00000561059 KNSTRNQ9Y448 316 aa18.33■□□□□ 0.52
PSME1-208ENST00000561059 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
PSME1-208ENST00000561059 SULT6B1Q6IMI4 303 aa18.32■□□□□ 0.52
PSME1-208ENST00000561059 DCAF5Q96JK2 942 aa18.32■□□□□ 0.52
PSME1-208ENST00000561059 KDRP35968 1356 aa18.31■□□□□ 0.52
PSME1-208ENST00000561059 ERVV-2B6SEH9 535 aa18.31■□□□□ 0.52
PSME1-208ENST00000561059 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
PSME1-208ENST00000561059 CABP4P57796 275 aa18.31■□□□□ 0.52
PSME1-208ENST00000561059 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
PSME1-208ENST00000561059 GIGYF1O75420 1035 aaPredicted RBP18.3■□□□□ 0.52
PSME1-208ENST00000561059 MMP10P09238 476 aa18.3■□□□□ 0.52
PSME1-208ENST00000561059 MTHFSP49914 203 aa18.3■□□□□ 0.52
PSME1-208ENST00000561059 CNGB1Q14028 1251 aaPredicted RBP18.3■□□□□ 0.52
PSME1-208ENST00000561059 HSP90AB1P08238 724 aaKnown RBP18.29■□□□□ 0.52
PSME1-208ENST00000561059 RTCBQ9Y3I0 505 aaKnown RBP18.29■□□□□ 0.52
PSME1-208ENST00000561059 KIF7Q2M1P5 1343 aa18.28■□□□□ 0.52
PSME1-208ENST00000561059 IL13P35225 146 aa18.28■□□□□ 0.52
PSME1-208ENST00000561059 AMOTQ4VCS5 1084 aa18.28■□□□□ 0.52
PSME1-208ENST00000561059 AMER1Q5JTC6 1135 aaPredicted RBP18.28■□□□□ 0.52
PSME1-208ENST00000561059 C1orf141Q5JVX7 400 aa18.28■□□□□ 0.52
PSME1-208ENST00000561059 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
PSME1-208ENST00000561059 ATP10DQ9P241 1426 aa18.27■□□□□ 0.52
PSME1-208ENST00000561059 TRAPPC3LQ5T215 181 aa18.27■□□□□ 0.52
PSME1-208ENST00000561059 ZNF526Q8TF50 670 aaPredicted RBP18.27■□□□□ 0.52
PSME1-208ENST00000561059 ARHGEF1Q92888 912 aaKnown RBP18.27■□□□□ 0.52
PSME1-208ENST00000561059 CEP350Q5VT06 3117 aa18.27■□□□□ 0.51
PSME1-208ENST00000561059 HMOX1P09601 288 aa18.25■□□□□ 0.51
PSME1-208ENST00000561059 CC2D1BQ5T0F9 858 aaKnown RBP18.25■□□□□ 0.51
PSME1-208ENST00000561059 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
PSME1-208ENST00000561059 RFC4P35249 363 aa18.23■□□□□ 0.51
PSME1-208ENST00000561059 LGR6Q9HBX8 967 aa18.23■□□□□ 0.51
PSME1-208ENST00000561059 SRP68Q9UHB9 627 aaKnown RBP18.23■□□□□ 0.51
PSME1-208ENST00000561059 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
PSME1-208ENST00000561059 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
PSME1-208ENST00000561059 A0A0G2JLW4 131 aa18.22■□□□□ 0.51
PSME1-208ENST00000561059 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
PSME1-208ENST00000561059 GYS1P13807 737 aa18.22■□□□□ 0.51
PSME1-208ENST00000561059 CRKLP46109 303 aaKnown RBP18.22■□□□□ 0.51
PSME1-208ENST00000561059 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
PSME1-208ENST00000561059 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
PSME1-208ENST00000561059 SLC39A6Q13433 755 aa18.2■□□□□ 0.5
PSME1-208ENST00000561059 NLGN1Q8N2Q7 840 aa18.2■□□□□ 0.5
PSME1-208ENST00000561059 COL5A3P25940 1745 aaPredicted RBP18.2■□□□□ 0.5
PSME1-208ENST00000561059 AKAP4Q5JQC9 854 aa18.19■□□□□ 0.5
PSME1-208ENST00000561059 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
PSME1-208ENST00000561059 BCS1LQ9Y276 419 aa18.19■□□□□ 0.5
PSME1-208ENST00000561059 ADCY9O60503 1353 aa18.18■□□□□ 0.5
PSME1-208ENST00000561059 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
PSME1-208ENST00000561059 ADRA2BP18089 450 aa18.18■□□□□ 0.5
PSME1-208ENST00000561059 DNAJC10Q8IXB1 793 aa18.18■□□□□ 0.5
PSME1-208ENST00000561059 MYH14Q7Z406 1995 aaKnown RBP18.18■□□□□ 0.5
PSME1-208ENST00000561059 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
PSME1-208ENST00000561059 DPEP1P16444 411 aa18.17■□□□□ 0.5
PSME1-208ENST00000561059 FKBP8Q14318 412 aa18.17■□□□□ 0.5
PSME1-208ENST00000561059 MTHFSDQ2M296 383 aaKnown RBP18.17■□□□□ 0.5
PSME1-208ENST00000561059 INTS5Q6P9B9 1019 aaKnown RBP18.17■□□□□ 0.5
PSME1-208ENST00000561059 SLC52A2Q9HAB3 445 aa18.17■□□□□ 0.5
PSME1-208ENST00000561059 PARP3Q9Y6F1 533 aa18.17■□□□□ 0.5
PSME1-208ENST00000561059 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
PSME1-208ENST00000561059 TJP1Q07157 1748 aa18.16■□□□□ 0.5
PSME1-208ENST00000561059 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
PSME1-208ENST00000561059 CCDC87Q9NVE4 849 aa18.16■□□□□ 0.5
PSME1-208ENST00000561059 N4BP2Q86UW6 1770 aaPredicted RBP18.16■□□□□ 0.5
PSME1-208ENST00000561059 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
PSME1-208ENST00000561059 DIAPH1O60610 1272 aaKnown RBP18.15■□□□□ 0.5
PSME1-208ENST00000561059 DDR1Q08345 913 aa18.15■□□□□ 0.5
PSME1-208ENST00000561059 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
PSME1-208ENST00000561059 TGFB2P61812 414 aa18.14■□□□□ 0.49
PSME1-208ENST00000561059 USP42Q9H9J4 1324 aaKnown RBP18.14■□□□□ 0.49
PSME1-208ENST00000561059 SCN11AQ9UI33 1791 aa18.13■□□□□ 0.49
PSME1-208ENST00000561059 U2SURPO15042 1029 aaKnown RBP18.13■□□□□ 0.49
PSME1-208ENST00000561059 FCHSD2O94868 740 aa18.13■□□□□ 0.49
PSME1-208ENST00000561059 ARHGAP27Q6ZUM4 889 aa18.13■□□□□ 0.49
PSME1-208ENST00000561059 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
PSME1-208ENST00000561059 CYP19A1P11511 503 aaPredicted RBP18.11■□□□□ 0.49
PSME1-208ENST00000561059 KCNA3P22001 575 aa18.11■□□□□ 0.49
PSME1-208ENST00000561059 CHRNA5P30532 468 aa18.11■□□□□ 0.49
PSME1-208ENST00000561059 KIF13BQ9NQT8 1826 aa18.11■□□□□ 0.49
PSME1-208ENST00000561059 MRC1P22897 1456 aa18.1■□□□□ 0.49
PSME1-208ENST00000561059 SOS1Q07889 1333 aaPredicted RBP18.1■□□□□ 0.49
PSME1-208ENST00000561059 ZBTB1Q9Y2K1 713 aa18.1■□□□□ 0.49
PSME1-208ENST00000561059 KCPQ6ZWJ8 1503 aa18.09■□□□□ 0.49
PSME1-208ENST00000561059 ZPR1O75312 459 aa18.09■□□□□ 0.49
PSME1-208ENST00000561059 COL3A1P02461 1466 aaPredicted RBP18.08■□□□□ 0.49
PSME1-208ENST00000561059 POLRMTO00411 1230 aaKnown RBP18.08■□□□□ 0.48
PSME1-208ENST00000561059 ADAMTS7Q9UKP4 1686 aa18.07■□□□□ 0.48
PSME1-208ENST00000561059 KIF3CO14782 793 aa18.07■□□□□ 0.48
PSME1-208ENST00000561059 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
PSME1-208ENST00000561059 TM4SF1P30408 202 aa18.07■□□□□ 0.48
PSME1-208ENST00000561059 COL15A1P39059 1388 aa18.06■□□□□ 0.48
PSME1-208ENST00000561059 PIM2Q9P1W9 311 aa18.06■□□□□ 0.48
PSME1-208ENST00000561059 NFIXQ14938 502 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms