RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 IL13P35225 146 aa19.89■□□□□ 0.77
TPM1-228ENST00000560975 YEATS2Q9ULM3 1422 aa19.89■□□□□ 0.77
TPM1-228ENST00000560975 AP5Z1O43299 807 aa19.89■□□□□ 0.77
TPM1-228ENST00000560975 LMOD3Q0VAK6 560 aa19.89■□□□□ 0.77
TPM1-228ENST00000560975 CHAF1AQ13111 956 aaPredicted RBP19.89■□□□□ 0.77
TPM1-228ENST00000560975 ZRANB1Q9UGI0 708 aa19.89■□□□□ 0.77
TPM1-228ENST00000560975 HMMRO75330 724 aa19.88■□□□□ 0.77
TPM1-228ENST00000560975 KCNF1Q9H3M0 494 aa19.88■□□□□ 0.77
TPM1-228ENST00000560975 ANKRD26Q9UPS8 1709 aa19.87■□□□□ 0.77
TPM1-228ENST00000560975 F6X3S4 739 aa19.87■□□□□ 0.77
TPM1-228ENST00000560975 ABCC3O15438 1527 aa19.87■□□□□ 0.77
TPM1-228ENST00000560975 KIAA1524Q8TCG1 905 aa19.87■□□□□ 0.77
TPM1-228ENST00000560975 RGS12O14924 1447 aa19.87■□□□□ 0.77
TPM1-228ENST00000560975 CHMLP26374 656 aa19.86■□□□□ 0.77
TPM1-228ENST00000560975 DIAPH3Q9NSV4 1193 aa19.86■□□□□ 0.77
TPM1-228ENST00000560975 LMTK2Q8IWU2 1503 aa19.86■□□□□ 0.77
TPM1-228ENST00000560975 KIF20AO95235 890 aa19.86■□□□□ 0.77
TPM1-228ENST00000560975 OSBPL3Q9H4L5 887 aa19.86■□□□□ 0.77
TPM1-228ENST00000560975 ARAP3Q8WWN8 1544 aa19.86■□□□□ 0.77
TPM1-228ENST00000560975 LETM1O95202 739 aaPredicted RBP19.85■□□□□ 0.77
TPM1-228ENST00000560975 RRS1Q15050 365 aaKnown RBP19.85■□□□□ 0.77
TPM1-228ENST00000560975 YTHDC2Q9H6S0 1430 aaKnown RBP19.85■□□□□ 0.77
TPM1-228ENST00000560975 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
TPM1-228ENST00000560975 CDC42BPGQ6DT37 1551 aa19.85■□□□□ 0.77
TPM1-228ENST00000560975 BCL11BQ9C0K0 894 aaPredicted RBP19.85■□□□□ 0.77
TPM1-228ENST00000560975 MCM10Q7L590 875 aa19.84■□□□□ 0.77
TPM1-228ENST00000560975 UNC5CLQ8IV45 518 aa19.84■□□□□ 0.77
TPM1-228ENST00000560975 ANAPC15P60006 121 aa19.84■□□□□ 0.77
TPM1-228ENST00000560975 NME9Q86XW9 330 aa19.84■□□□□ 0.77
TPM1-228ENST00000560975 IL25Q9H293 177 aa19.84■□□□□ 0.77
TPM1-228ENST00000560975 RPAP1Q9BWH6 1393 aaPredicted RBP19.83■□□□□ 0.77
TPM1-228ENST00000560975 UBE2HP62256 183 aa19.83■□□□□ 0.77
TPM1-228ENST00000560975 IDI1Q13907 227 aa19.83■□□□□ 0.76
TPM1-228ENST00000560975 ZSCAN22P10073 491 aaPredicted RBP19.82■□□□□ 0.76
TPM1-228ENST00000560975 MIS18AQ9NYP9 233 aa19.82■□□□□ 0.76
TPM1-228ENST00000560975 KIDINS220Q9ULH0 1771 aa19.82■□□□□ 0.76
TPM1-228ENST00000560975 G2E3Q7L622 706 aa19.82■□□□□ 0.76
TPM1-228ENST00000560975 ANKRD7Q92527 254 aa19.82■□□□□ 0.76
TPM1-228ENST00000560975 NEXMIFQ5QGS0 1516 aa19.81■□□□□ 0.76
TPM1-228ENST00000560975 MAP2P11137 1827 aaKnown RBP19.81■□□□□ 0.76
TPM1-228ENST00000560975 MAP4K4O95819 1239 aaPredicted RBP19.81■□□□□ 0.76
TPM1-228ENST00000560975 ZNF771Q7L3S4 317 aaPredicted RBP19.81■□□□□ 0.76
TPM1-228ENST00000560975 AEBP1Q8IUX7 1158 aa19.81■□□□□ 0.76
TPM1-228ENST00000560975 TMEM87AQ8NBN3 555 aa19.81■□□□□ 0.76
TPM1-228ENST00000560975 LRRCC1Q9C099 1032 aa19.81■□□□□ 0.76
TPM1-228ENST00000560975 ABCA9Q8IUA7 1624 aa19.81■□□□□ 0.76
TPM1-228ENST00000560975 CHMP3Q9Y3E7 222 aa19.81■□□□□ 0.76
TPM1-228ENST00000560975 SYT1P21579 422 aa19.8■□□□□ 0.76
TPM1-228ENST00000560975 PTGS1P23219 599 aa19.8■□□□□ 0.76
TPM1-228ENST00000560975 DLG5Q8TDM6 1919 aa19.8■□□□□ 0.76
TPM1-228ENST00000560975 STX6O43752 255 aa19.8■□□□□ 0.76
TPM1-228ENST00000560975 PTPRMP28827 1452 aa19.8■□□□□ 0.76
TPM1-228ENST00000560975 UHRF1BP1LA0JNW5 1464 aa19.79■□□□□ 0.76
TPM1-228ENST00000560975 PTPRCP08575 1304 aa19.79■□□□□ 0.76
TPM1-228ENST00000560975 FUCA2Q9BTY2 467 aa19.79■□□□□ 0.76
TPM1-228ENST00000560975 KIF20BQ96Q89 1820 aa19.78■□□□□ 0.76
TPM1-228ENST00000560975 DNM1Q05193 864 aaKnown RBP19.78■□□□□ 0.76
TPM1-228ENST00000560975 F13A1P00488 732 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 FGD1P98174 961 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 NAA30Q147X3 362 aaPredicted RBP19.77■□□□□ 0.76
TPM1-228ENST00000560975 WAPLQ7Z5K2 1190 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 C16orf45Q96MC5 204 aaPredicted RBP19.77■□□□□ 0.76
TPM1-228ENST00000560975 SALL3Q9BXA9 1300 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 PNMA6EA0A0J9YXQ4 647 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 GOLGA6L6A8MZA4 724 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 GNAI2P04899 355 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 CPA1P15085 419 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 SMC3Q9UQE7 1217 aa19.77■□□□□ 0.76
TPM1-228ENST00000560975 CTIFO43310 598 aaKnown RBP19.77■□□□□ 0.75
TPM1-228ENST00000560975 NCBP1Q09161 790 aaKnown RBP19.77■□□□□ 0.75
TPM1-228ENST00000560975 IL1RAPL2Q9NP60 686 aa19.77■□□□□ 0.75
TPM1-228ENST00000560975 AK2P54819 239 aa19.76■□□□□ 0.75
TPM1-228ENST00000560975 SULT6B1Q6IMI4 303 aa19.76■□□□□ 0.75
TPM1-228ENST00000560975 CGNQ9P2M7 1197 aaKnown RBP19.76■□□□□ 0.75
TPM1-228ENST00000560975 CHL1O00533 1208 aa19.76■□□□□ 0.75
TPM1-228ENST00000560975 HAP1P54257 671 aaPredicted RBP19.76■□□□□ 0.75
TPM1-228ENST00000560975 LRMPQ12912 555 aa19.76■□□□□ 0.75
TPM1-228ENST00000560975 BBXQ8WY36 941 aaPredicted RBP19.76■□□□□ 0.75
TPM1-228ENST00000560975 DRC7Q8IY82 874 aa19.75■□□□□ 0.75
TPM1-228ENST00000560975 HSPA4P34932 840 aa19.75■□□□□ 0.75
TPM1-228ENST00000560975 CPSF1Q10570 1443 aaKnown RBP19.74■□□□□ 0.75
TPM1-228ENST00000560975 CAMK4Q16566 473 aa19.74■□□□□ 0.75
TPM1-228ENST00000560975 NUTM1Q86Y26 1132 aa19.74■□□□□ 0.75
TPM1-228ENST00000560975 TPM3P06753 285 aa19.74■□□□□ 0.75
TPM1-228ENST00000560975 CCDC186Q7Z3E2 898 aa19.74■□□□□ 0.75
TPM1-228ENST00000560975 RUFY3Q7L099 469 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 OGFRQ9NZT2 677 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 KIAA0232Q92628 1395 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 LARGE1O95461 756 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 LUZP1Q86V48 1076 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 SNX14Q9Y5W7 946 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 POGZQ7Z3K3 1410 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
TPM1-228ENST00000560975 CCDC192P0DO97 292 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 CCDC83Q8IWF9 413 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 RASEFQ8IZ41 740 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 NRBP1Q9UHY1 535 aa19.73■□□□□ 0.75
TPM1-228ENST00000560975 CCT4P50991 539 aaKnown RBP19.72■□□□□ 0.75
TPM1-228ENST00000560975 FEZ1Q99689 392 aa19.72■□□□□ 0.75
TPM1-228ENST00000560975 SIGLEC1Q9BZZ2 1709 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms