RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 CHMP4AQ9BY43 222 aa28.62■■■□□ 2.17
PBX1-218ENST00000560469 HSP90AB1P08238 724 aaKnown RBP28.61■■■□□ 2.17
PBX1-218ENST00000560469 TSHZ2Q9NRE2 1034 aa28.61■■■□□ 2.17
PBX1-218ENST00000560469 HOXB7P09629 217 aa28.61■■■□□ 2.17
PBX1-218ENST00000560469 EIF4A1P60842 406 aaKnown RBP28.61■■■□□ 2.17
PBX1-218ENST00000560469 STK31Q9BXU1 1019 aa28.61■■■□□ 2.17
PBX1-218ENST00000560469 STRN4Q9NRL3 753 aa28.61■■■□□ 2.17
PBX1-218ENST00000560469 SLC4A2P04920 1241 aa28.6■■■□□ 2.17
PBX1-218ENST00000560469 LARP1Q6PKG0 1096 aaKnown RBP28.59■■■□□ 2.17
PBX1-218ENST00000560469 DCAF5Q96JK2 942 aa28.58■■■□□ 2.17
PBX1-218ENST00000560469 KDM6AO15550 1401 aaPredicted RBP28.58■■■□□ 2.17
PBX1-218ENST00000560469 BTG4Q9NY30 223 aa28.58■■■□□ 2.16
PBX1-218ENST00000560469 CACNA1FO60840 1977 aa28.58■■■□□ 2.16
PBX1-218ENST00000560469 IL2RBP14784 551 aa28.57■■■□□ 2.16
PBX1-218ENST00000560469 PIP4K2BP78356 416 aa28.57■■■□□ 2.16
PBX1-218ENST00000560469 PCDHB15Q9Y5E8 787 aa28.57■■■□□ 2.16
PBX1-218ENST00000560469 CYP27B1O15528 508 aa28.56■■■□□ 2.16
PBX1-218ENST00000560469 ZCRB1Q8TBF4 217 aaKnown RBP28.56■■■□□ 2.16
PBX1-218ENST00000560469 SLC52A2Q9HAB3 445 aa28.55■■■□□ 2.16
PBX1-218ENST00000560469 ZBTB40Q9NUA8 1239 aa28.55■■■□□ 2.16
PBX1-218ENST00000560469 PCDH11XQ9BZA7 1347 aa28.55■■■□□ 2.16
PBX1-218ENST00000560469 PCDH11YQ9BZA8 1340 aa28.55■■■□□ 2.16
PBX1-218ENST00000560469 IGHDP01880 384 aa28.54■■■□□ 2.16
PBX1-218ENST00000560469 RWDD1Q9H446 243 aaPredicted RBP28.54■■■□□ 2.16
PBX1-218ENST00000560469 MRC1P22897 1456 aa28.54■■■□□ 2.16
PBX1-218ENST00000560469 RGS12O14924 1447 aa28.53■■■□□ 2.16
PBX1-218ENST00000560469 UBAP1LF5GYI3 381 aa28.53■■■□□ 2.16
PBX1-218ENST00000560469 AEBP2Q6ZN18 517 aaPredicted RBP28.53■■■□□ 2.16
PBX1-218ENST00000560469 HDGFL1Q5TGJ6 251 aa28.52■■■□□ 2.16
PBX1-218ENST00000560469 INTS3Q68E01 1043 aaKnown RBP28.52■■■□□ 2.16
PBX1-218ENST00000560469 ZBTB7BO15156 539 aaPredicted RBP28.51■■■□□ 2.16
PBX1-218ENST00000560469 KCNQ3O43525 872 aa28.51■■■□□ 2.16
PBX1-218ENST00000560469 HEG1Q9ULI3 1381 aa28.5■■■□□ 2.15
PBX1-218ENST00000560469 G2E3Q7L622 706 aa28.48■■■□□ 2.15
PBX1-218ENST00000560469 NFATC2IPQ8NCF5 419 aa28.47■■■□□ 2.15
PBX1-218ENST00000560469 FLIIQ13045 1269 aa28.46■■■□□ 2.15
PBX1-218ENST00000560469 HDAC1Q13547 482 aaPredicted RBP28.46■■■□□ 2.15
PBX1-218ENST00000560469 NKX1-1Q15270 411 aaPredicted RBP28.46■■■□□ 2.15
PBX1-218ENST00000560469 NECTIN2Q92692 538 aa28.46■■■□□ 2.15
PBX1-218ENST00000560469 PLCH1Q4KWH8 1693 aa28.46■■■□□ 2.15
PBX1-218ENST00000560469 GIGYF1O75420 1035 aaPredicted RBP28.45■■■□□ 2.15
PBX1-218ENST00000560469 ZNF790Q6PG37 636 aa28.45■■■□□ 2.15
PBX1-218ENST00000560469 SHANK3Q9BYB0 1731 aa28.45■■■□□ 2.15
PBX1-218ENST00000560469 CABP4P57796 275 aa28.44■■■□□ 2.14
PBX1-218ENST00000560469 EIF2S2P20042 333 aaKnown RBP28.43■■■□□ 2.14
PBX1-218ENST00000560469 ERVV-2B6SEH9 535 aa28.42■■■□□ 2.14
PBX1-218ENST00000560469 CCT4P50991 539 aaKnown RBP28.42■■■□□ 2.14
PBX1-218ENST00000560469 USP35Q9P2H5 1018 aa28.42■■■□□ 2.14
PBX1-218ENST00000560469 FKBP5Q13451 457 aaPredicted RBP28.42■■■□□ 2.14
PBX1-218ENST00000560469 ADAMTS2O95450 1211 aa28.41■■■□□ 2.14
PBX1-218ENST00000560469 DISP2A7MBM2 1401 aa28.41■■■□□ 2.14
PBX1-218ENST00000560469 NRAPQ86VF7 1730 aa28.4■■■□□ 2.14
PBX1-218ENST00000560469 TTC5Q8N0Z6 440 aa28.39■■■□□ 2.14
PBX1-218ENST00000560469 DBF4Q9UBU7 674 aaPredicted RBP28.39■■■□□ 2.14
PBX1-218ENST00000560469 PXDNLA1KZ92 1463 aa28.39■■■□□ 2.13
PBX1-218ENST00000560469 SLC39A6Q13433 755 aa28.38■■■□□ 2.13
PBX1-218ENST00000560469 DDX54Q8TDD1 881 aaKnown RBP28.38■■■□□ 2.13
PBX1-218ENST00000560469 CHPF2Q9P2E5 772 aa28.38■■■□□ 2.13
PBX1-218ENST00000560469 NWD2Q9ULI1 1742 aa28.37■■■□□ 2.13
PBX1-218ENST00000560469 NUTM2BA6NNL0 878 aaPredicted RBP28.37■■■□□ 2.13
PBX1-218ENST00000560469 NUTM2EB1AL46 878 aaPredicted RBP28.37■■■□□ 2.13
PBX1-218ENST00000560469 NUTM2AQ8IVF1 878 aaPredicted RBP28.37■■■□□ 2.13
PBX1-218ENST00000560469 CERKQ8TCT0 537 aa28.37■■■□□ 2.13
PBX1-218ENST00000560469 F6X3S4 739 aa28.36■■■□□ 2.13
PBX1-218ENST00000560469 SLC4A10Q6U841 1118 aa28.36■■■□□ 2.13
PBX1-218ENST00000560469 JCADQ9P266 1359 aa28.36■■■□□ 2.13
PBX1-218ENST00000560469 N4BP2Q86UW6 1770 aaPredicted RBP28.36■■■□□ 2.13
PBX1-218ENST00000560469 WNK3Q9BYP7 1800 aa28.36■■■□□ 2.13
PBX1-218ENST00000560469 FMNL2Q96PY5 1086 aa28.35■■■□□ 2.13
PBX1-218ENST00000560469 PHAXQ9H814 394 aaKnown RBP28.35■■■□□ 2.13
PBX1-218ENST00000560469 CDCA7Q9BWT1 371 aaPredicted RBP28.34■■■□□ 2.13
PBX1-218ENST00000560469 THRAP3Q9Y2W1 955 aaKnown RBP28.34■■■□□ 2.13
PBX1-218ENST00000560469 SKAP1Q86WV1 359 aa28.33■■■□□ 2.13
PBX1-218ENST00000560469 ZNF496Q96IT1 587 aaPredicted RBP28.33■■■□□ 2.13
PBX1-218ENST00000560469 SNRPA1P09661 255 aaKnown RBP28.32■■■□□ 2.12
PBX1-218ENST00000560469 C5P01031 1676 aa28.32■■■□□ 2.12
PBX1-218ENST00000560469 SLIT2O94813 1529 aa28.32■■■□□ 2.12
PBX1-218ENST00000560469 SMC5Q8IY18 1101 aa28.32■■■□□ 2.12
PBX1-218ENST00000560469 HYPKQ9NX55 129 aa28.32■■■□□ 2.12
PBX1-218ENST00000560469 RBM19Q9Y4C8 960 aaKnown RBP28.32■■■□□ 2.12
PBX1-218ENST00000560469 C1orf115Q9H7X2 142 aa28.31■■■□□ 2.12
PBX1-218ENST00000560469 SPATA31A1Q5TZJ5 1347 aa28.3■■■□□ 2.12
PBX1-218ENST00000560469 PRAMEF22A3QJZ6 481 aa28.3■■■□□ 2.12
PBX1-218ENST00000560469 DDX21Q9NR30 783 aaKnown RBP eCLIP28.3■■■□□ 2.12
PBX1-218ENST00000560469 PDZRN3Q9UPQ7 1066 aa28.3■■■□□ 2.12
PBX1-218ENST00000560469 EXOC5O00471 708 aa28.29■■■□□ 2.12
PBX1-218ENST00000560469 PAPPAQ13219 1627 aa28.29■■■□□ 2.12
PBX1-218ENST00000560469 RGS3P49796 1198 aa28.29■■■□□ 2.12
PBX1-218ENST00000560469 RPAP2Q8IXW5 612 aaPredicted RBP28.28■■■□□ 2.12
PBX1-218ENST00000560469 MEIS3Q99687 375 aa28.28■■■□□ 2.12
PBX1-218ENST00000560469 UBR2Q8IWV8 1755 aa28.27■■■□□ 2.12
PBX1-218ENST00000560469 TOGARAM1Q9Y4F4 1720 aa28.27■■■□□ 2.12
PBX1-218ENST00000560469 GCC1Q96CN9 775 aa28.27■■■□□ 2.12
PBX1-218ENST00000560469 TNS2Q63HR2 1409 aa28.26■■■□□ 2.12
PBX1-218ENST00000560469 LRP6O75581 1613 aa28.26■■■□□ 2.11
PBX1-218ENST00000560469 GNAI3P08754 354 aa28.26■■■□□ 2.11
PBX1-218ENST00000560469 LAMB4A4D0S4 1761 aa28.25■■■□□ 2.11
PBX1-218ENST00000560469 SPATA31A5Q5VU36 1347 aa28.25■■■□□ 2.11
PBX1-218ENST00000560469 SPATA31A7Q8IWB4 1347 aa28.25■■■□□ 2.11
PBX1-218ENST00000560469 ANXA1P04083 346 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms