RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 BLMP54132 1417 aaPredicted RBP7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 SOCS7O14512 581 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 HOXA2O43364 376 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 GUCA2AQ02747 115 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 PDE4CQ08493 712 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 TRIM32Q13049 653 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 L1TD1Q5T7N2 865 aaKnown RBP7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 RCAN3Q9UKA8 241 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 BRPF3Q9ULD4 1205 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 ADGRL2O95490 1459 aa7.73□□□□□ -1.17
SNRPA1-209ENST00000560307 USP47Q96K76 1375 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 USP46P62068 366 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 CTDSPL2Q05D32 466 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 VAC14Q08AM6 782 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 WASHC4Q2M389 1173 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 NBPF8Q3BBV2 869 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 HELBQ8NG08 1087 aaPredicted RBP7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 FRAT1Q92837 279 aaPredicted RBP7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 HLA-CQ95604 372 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 WDR62O43379 1518 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 KDM5DQ9BY66 1539 aa7.72□□□□□ -1.17
SNRPA1-209ENST00000560307 POLA1P09884 1462 aaPredicted RBP7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 PZPP20742 1482 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 IGHA1P01876 353 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 CSB-PGBD3P0DP91 1061 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 GCGRP47871 477 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 EXOC6Q8TAG9 804 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 TMC1Q8TDI8 760 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 PBXIP1Q96AQ6 731 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 PKNOX2Q96KN3 472 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 GJD4Q96KN9 370 aaPredicted RBP7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 TOPBP1Q92547 1522 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 CEP170Q5SW79 1584 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 EIF3AQ14152 1382 aaKnown RBP7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 ZMYM3Q14202 1370 aa7.71□□□□□ -1.18
SNRPA1-209ENST00000560307 KIAA1107Q9UPP5 1409 aa7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 EPRSP07814 1512 aaKnown RBP7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 C6orf229H3BNL8 230 aa7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 ALDH1A1P00352 501 aa7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 MTMR2Q13614 643 aa7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 CENPQQ7L2Z9 268 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 KDM2BQ8NHM5 1336 aa7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 PARD3Q8TEW0 1356 aa7.7□□□□□ -1.18
SNRPA1-209ENST00000560307 FANCD2Q9BXW9 1451 aa7.69□□□□□ -1.18
SNRPA1-209ENST00000560307 LAMC3Q9Y6N6 1575 aa7.69□□□□□ -1.18
SNRPA1-209ENST00000560307 CAPN5O15484 640 aaPredicted RBP7.69□□□□□ -1.18
SNRPA1-209ENST00000560307 ADAMTS19Q8TE59 1207 aa7.69□□□□□ -1.18
SNRPA1-209ENST00000560307 LRRN4Q8WUT4 740 aa7.69□□□□□ -1.18
SNRPA1-209ENST00000560307 PCDHGC3Q9UN70 934 aa7.69□□□□□ -1.18
SNRPA1-209ENST00000560307 ADCY10Q96PN6 1610 aa7.69□□□□□ -1.18
SNRPA1-209ENST00000560307 MFAP1P55081 439 aaKnown RBP7.68□□□□□ -1.18
SNRPA1-209ENST00000560307 PSMG3-AS1Q96PY0 264 aa7.68□□□□□ -1.18
SNRPA1-209ENST00000560307 DNMT3AQ9Y6K1 912 aaPredicted RBP7.68□□□□□ -1.18
SNRPA1-209ENST00000560307 ABCC5O15440 1437 aa7.68□□□□□ -1.18
SNRPA1-209ENST00000560307 RRP9O43818 475 aaKnown RBP7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 EIF5BO60841 1220 aaKnown RBP7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 VSIG8P0DPA2 414 aa7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 NLRP13Q86W25 1043 aa7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 THAP11Q96EK4 314 aa7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 PPP1R12CQ9BZL4 782 aa7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 MTMR7Q9Y216 660 aa7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 ZNF608Q9ULD9 1512 aaPredicted RBP7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 TRPM1Q7Z4N2 1603 aa7.67□□□□□ -1.18
SNRPA1-209ENST00000560307 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 LMOD1P29536 600 aaPredicted RBP7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 GRIPAP1Q4V328 841 aa7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 CDCA8Q53HL2 280 aa7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 CFAP70Q5T0N1 1121 aa7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 RRP7BPQ9NSQ0 103 aa7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 ADAMTS8Q9UP79 889 aa7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 IQGAP2Q13576 1575 aa7.66□□□□□ -1.18
SNRPA1-209ENST00000560307 CARNS1A5YM72 827 aa7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 CFAP99D6REC4 459 aa7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 PLXNC1O60486 1568 aa7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 MORN1Q5T089 497 aa7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 RC3H1Q5TC82 1133 aaKnown RBP7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 ZFP42Q96MM3 310 aa7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 EIF2AK4Q9P2K8 1649 aaKnown RBP7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 ISY1Q9ULR0 285 aaKnown RBP7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 SHANK2Q9UPX8 1470 aa7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 NINLQ9Y2I6 1382 aa7.65□□□□□ -1.18
SNRPA1-209ENST00000560307 CAMSAP2Q08AD1 1489 aa7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 PALM3A6NDB9 673 aaPredicted RBP7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 PATL2C9JE40 543 aaKnown RBP7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 IRS1P35568 1242 aa7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 C8orf34Q49A92 452 aa7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 FOXD4L5Q5VV16 416 aaPredicted RBP7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 EPS8L1Q8TE68 723 aa7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 FOXD4L4Q8WXT5 416 aaPredicted RBP7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 KRTAP9-2Q9BYQ4 174 aa7.64□□□□□ -1.19
SNRPA1-209ENST00000560307 EIF4G3O43432 1585 aaKnown RBP7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 COL17A1Q9UMD9 1497 aaPredicted RBP7.63□□□□□ -1.19
SNRPA1-209ENST00000560307 RAD54L2Q9Y4B4 1467 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms