RNA–Protein interactions for RNA: ENST00000560234.1

PCLAF-208, Transcript of PCNA clamp associated factor, humanhuman

TSL 2

Gene PCLAF, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCLAF-208ENST00000560234 IGSF1Q8N6C5 1336 aa13.21□□□□□ -0.29
PCLAF-208ENST00000560234 KCNQ2O43526 872 aa13.21□□□□□ -0.29
PCLAF-208ENST00000560234 HMOX1P09601 288 aa13.21□□□□□ -0.29
PCLAF-208ENST00000560234 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
PCLAF-208ENST00000560234 PCDH11XQ9BZA7 1347 aa13.2□□□□□ -0.3
PCLAF-208ENST00000560234 PCDH11YQ9BZA8 1340 aa13.2□□□□□ -0.3
PCLAF-208ENST00000560234 PARP4Q9UKK3 1724 aaKnown RBP13.2□□□□□ -0.3
PCLAF-208ENST00000560234 EZH2Q15910 746 aaKnown RBP13.19□□□□□ -0.3
PCLAF-208ENST00000560234 PLEKHO1Q53GL0 409 aaPredicted RBP13.19□□□□□ -0.3
PCLAF-208ENST00000560234 CYP27B1O15528 508 aa13.18□□□□□ -0.3
PCLAF-208ENST00000560234 PRIM1P49642 420 aaKnown RBP13.18□□□□□ -0.3
PCLAF-208ENST00000560234 RALBP1Q15311 655 aa13.18□□□□□ -0.3
PCLAF-208ENST00000560234 TRIM35Q9UPQ4 493 aa13.18□□□□□ -0.3
PCLAF-208ENST00000560234 NUDCQ9Y266 331 aa13.18□□□□□ -0.3
PCLAF-208ENST00000560234 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
PCLAF-208ENST00000560234 MAP2P11137 1827 aaKnown RBP13.18□□□□□ -0.3
PCLAF-208ENST00000560234 ZNF530Q6P9A1 599 aaPredicted RBP13.17□□□□□ -0.3
PCLAF-208ENST00000560234 COLQQ9Y215 455 aaPredicted RBP13.17□□□□□ -0.3
PCLAF-208ENST00000560234 U2AF1L5P0DN76 240 aaPredicted RBP13.16□□□□□ -0.3
PCLAF-208ENST00000560234 U2AF1Q01081 240 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCLAF-208ENST00000560234 DCAF8Q5TAQ9 597 aa13.16□□□□□ -0.3
PCLAF-208ENST00000560234 IFNL2Q8IZJ0 200 aa13.16□□□□□ -0.3
PCLAF-208ENST00000560234 CAMKK2Q96RR4 588 aa13.16□□□□□ -0.3
PCLAF-208ENST00000560234 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCLAF-208ENST00000560234 PARD3Q8TEW0 1356 aa13.16□□□□□ -0.3
PCLAF-208ENST00000560234 BCL9O00512 1426 aa13.15□□□□□ -0.3
PCLAF-208ENST00000560234 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
PCLAF-208ENST00000560234 RGPD2P0DJD1 1756 aa13.15□□□□□ -0.3
PCLAF-208ENST00000560234 VASPP50552 380 aaPredicted RBP13.15□□□□□ -0.3
PCLAF-208ENST00000560234 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
PCLAF-208ENST00000560234 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
PCLAF-208ENST00000560234 PHKG2P15735 406 aa13.14□□□□□ -0.31
PCLAF-208ENST00000560234 IER5LQ5T953 404 aa13.14□□□□□ -0.31
PCLAF-208ENST00000560234 MPRIPQ6WCQ1 1025 aa13.14□□□□□ -0.31
PCLAF-208ENST00000560234 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
PCLAF-208ENST00000560234 PLSCR1O15162 318 aa13.12□□□□□ -0.31
PCLAF-208ENST00000560234 SCUBE2Q9NQ36 999 aa13.12□□□□□ -0.31
PCLAF-208ENST00000560234 MYBBP1AQ9BQG0 1328 aaKnown RBP13.12□□□□□ -0.31
PCLAF-208ENST00000560234 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
PCLAF-208ENST00000560234 KDRP35968 1356 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 PSDA5PKW4 1024 aaPredicted RBP13.11□□□□□ -0.31
PCLAF-208ENST00000560234 SEC24BO95487 1268 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
PCLAF-208ENST00000560234 PYGBP11216 843 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
PCLAF-208ENST00000560234 TXNRD1Q16881 649 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 NBPF14Q5TI25 921 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 TMEM106CQ9BVX2 250 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 TMOD3Q9NYL9 352 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 EP400Q96L91 3159 aa13.11□□□□□ -0.31
PCLAF-208ENST00000560234 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
PCLAF-208ENST00000560234 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
PCLAF-208ENST00000560234 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
PCLAF-208ENST00000560234 PRKRIP1Q9H875 184 aaPredicted RBP13.1□□□□□ -0.31
PCLAF-208ENST00000560234 RGPD1P0DJD0 1748 aa13.1□□□□□ -0.31
PCLAF-208ENST00000560234 KCNQ4P56696 695 aa13.09□□□□□ -0.31
PCLAF-208ENST00000560234 CABP4P57796 275 aa13.09□□□□□ -0.31
PCLAF-208ENST00000560234 ANP32CO43423 234 aa13.08□□□□□ -0.32
PCLAF-208ENST00000560234 FCHSD2O94868 740 aa13.08□□□□□ -0.32
PCLAF-208ENST00000560234 NEFMP07197 916 aa13.08□□□□□ -0.32
PCLAF-208ENST00000560234 AKAP4Q5JQC9 854 aa13.08□□□□□ -0.32
PCLAF-208ENST00000560234 PIGBQ92521 554 aa13.08□□□□□ -0.32
PCLAF-208ENST00000560234 RSPH6AQ9H0K4 717 aa13.08□□□□□ -0.32
PCLAF-208ENST00000560234 KLHL34Q8N239 644 aa13.07□□□□□ -0.32
PCLAF-208ENST00000560234 GAS2L2Q8NHY3 880 aa13.07□□□□□ -0.32
PCLAF-208ENST00000560234 PHACTR3Q96KR7 559 aa13.07□□□□□ -0.32
PCLAF-208ENST00000560234 PLEKHG2Q9H7P9 1386 aa13.07□□□□□ -0.32
PCLAF-208ENST00000560234 TNS1Q9HBL0 1735 aaKnown RBP13.06□□□□□ -0.32
PCLAF-208ENST00000560234 ERVV-2B6SEH9 535 aa13.06□□□□□ -0.32
PCLAF-208ENST00000560234 WDR43Q15061 677 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCLAF-208ENST00000560234 SMARCC1Q92922 1105 aaPredicted RBP13.06□□□□□ -0.32
PCLAF-208ENST00000560234 LGR6Q9HBX8 967 aa13.06□□□□□ -0.32
PCLAF-208ENST00000560234 STK32BQ9NY57 414 aa13.06□□□□□ -0.32
PCLAF-208ENST00000560234 CCNL1Q9UK58 526 aaPredicted RBP13.06□□□□□ -0.32
PCLAF-208ENST00000560234 POTEMA6NI47 508 aa13.05□□□□□ -0.32
PCLAF-208ENST00000560234 NFATC2IPQ8NCF5 419 aa13.05□□□□□ -0.32
PCLAF-208ENST00000560234 ASAP1Q9ULH1 1129 aa13.05□□□□□ -0.32
PCLAF-208ENST00000560234 PALLDQ8WX93 1383 aa13.05□□□□□ -0.32
PCLAF-208ENST00000560234 GNAT3A8MTJ3 354 aa13.04□□□□□ -0.32
PCLAF-208ENST00000560234 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
PCLAF-208ENST00000560234 SLC27A3Q5K4L6 730 aa13.04□□□□□ -0.32
PCLAF-208ENST00000560234 POTEGQ6S5H5 508 aa13.04□□□□□ -0.32
PCLAF-208ENST00000560234 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
PCLAF-208ENST00000560234 ANO8Q9HCE9 1232 aaPredicted RBP13.04□□□□□ -0.32
PCLAF-208ENST00000560234 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
PCLAF-208ENST00000560234 NHSQ6T4R5 1651 aa13.04□□□□□ -0.32
PCLAF-208ENST00000560234 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
PCLAF-208ENST00000560234 RTF1Q92541 710 aaKnown RBP13.03□□□□□ -0.32
PCLAF-208ENST00000560234 ATG3Q9NT62 314 aa13.03□□□□□ -0.32
PCLAF-208ENST00000560234 PCDHB8Q9UN66 801 aa13.03□□□□□ -0.32
PCLAF-208ENST00000560234 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
PCLAF-208ENST00000560234 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
PCLAF-208ENST00000560234 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.32
PCLAF-208ENST00000560234 TEFQ10587 303 aa13.02□□□□□ -0.33
PCLAF-208ENST00000560234 GSE1Q14687 1217 aa13.02□□□□□ -0.33
PCLAF-208ENST00000560234 CCDC146Q8IYE0 955 aa13.02□□□□□ -0.33
PCLAF-208ENST00000560234 MAP3K5Q99683 1374 aa13.02□□□□□ -0.33
PCLAF-208ENST00000560234 DOT1LQ8TEK3 1739 aa13.02□□□□□ -0.33
PCLAF-208ENST00000560234 PTCD1O75127 700 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms