RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 TAF1LQ8IZX4 1826 aa12.28□□□□□ -0.44
IDH3A-217ENST00000559889 ERVV-2B6SEH9 535 aa12.28□□□□□ -0.44
IDH3A-217ENST00000559889 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
IDH3A-217ENST00000559889 C4BP0C0L5 1744 aa12.27□□□□□ -0.44
IDH3A-217ENST00000559889 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
IDH3A-217ENST00000559889 ITPK1Q13572 414 aa12.27□□□□□ -0.45
IDH3A-217ENST00000559889 LINC00116Q8NCU8 138 aa12.27□□□□□ -0.45
IDH3A-217ENST00000559889 SMIM5Q71RC9 77 aa12.26□□□□□ -0.45
IDH3A-217ENST00000559889 SLC4A9Q96Q91 983 aa12.26□□□□□ -0.45
IDH3A-217ENST00000559889 HMGB2P26583 209 aaKnown RBP12.26□□□□□ -0.45
IDH3A-217ENST00000559889 POLD1P28340 1107 aa12.25□□□□□ -0.45
IDH3A-217ENST00000559889 COL3A1P02461 1466 aaPredicted RBP12.25□□□□□ -0.45
IDH3A-217ENST00000559889 AK7Q96M32 723 aa12.25□□□□□ -0.45
IDH3A-217ENST00000559889 HMOX1P09601 288 aa12.24□□□□□ -0.45
IDH3A-217ENST00000559889 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
IDH3A-217ENST00000559889 MSL1Q68DK7 614 aa12.24□□□□□ -0.45
IDH3A-217ENST00000559889 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
IDH3A-217ENST00000559889 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
IDH3A-217ENST00000559889 CNGB1Q14028 1251 aaPredicted RBP12.23□□□□□ -0.45
IDH3A-217ENST00000559889 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
IDH3A-217ENST00000559889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
IDH3A-217ENST00000559889 CABP4P57796 275 aa12.23□□□□□ -0.45
IDH3A-217ENST00000559889 UBR3Q6ZT12 1888 aa12.23□□□□□ -0.45
IDH3A-217ENST00000559889 DCAF8L1A6NGE4 600 aa12.22□□□□□ -0.45
IDH3A-217ENST00000559889 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
IDH3A-217ENST00000559889 PHF14O94880 888 aa12.22□□□□□ -0.45
IDH3A-217ENST00000559889 YY1P25490 414 aa12.22□□□□□ -0.45
IDH3A-217ENST00000559889 SSFA2P28290 1259 aa12.22□□□□□ -0.45
IDH3A-217ENST00000559889 AKAP4Q5JQC9 854 aa12.22□□□□□ -0.45
IDH3A-217ENST00000559889 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
IDH3A-217ENST00000559889 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.45
IDH3A-217ENST00000559889 GNPATO15228 680 aa12.21□□□□□ -0.45
IDH3A-217ENST00000559889 MTHFSDQ2M296 383 aaKnown RBP12.21□□□□□ -0.45
IDH3A-217ENST00000559889 LGR6Q9HBX8 967 aa12.21□□□□□ -0.45
IDH3A-217ENST00000559889 CCER2I3L3R5 266 aa12.2□□□□□ -0.46
IDH3A-217ENST00000559889 KLHL34Q8N239 644 aa12.2□□□□□ -0.46
IDH3A-217ENST00000559889 RBM42Q9BTD8 480 aaKnown RBP12.2□□□□□ -0.46
IDH3A-217ENST00000559889 SCN11AQ9UI33 1791 aa12.19□□□□□ -0.46
IDH3A-217ENST00000559889 PTCD1O75127 700 aaKnown RBP12.19□□□□□ -0.46
IDH3A-217ENST00000559889 SLC52A2Q9HAB3 445 aa12.19□□□□□ -0.46
IDH3A-217ENST00000559889 MRC1P22897 1456 aa12.18□□□□□ -0.46
IDH3A-217ENST00000559889 RNMTO43148 476 aaKnown RBP12.18□□□□□ -0.46
IDH3A-217ENST00000559889 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
IDH3A-217ENST00000559889 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
IDH3A-217ENST00000559889 CNTNAP4Q9C0A0 1308 aa12.18□□□□□ -0.46
IDH3A-217ENST00000559889 ADAMTS7Q9UKP4 1686 aa12.18□□□□□ -0.46
IDH3A-217ENST00000559889 U2SURPO15042 1029 aaKnown RBP12.17□□□□□ -0.46
IDH3A-217ENST00000559889 PPP2R1AP30153 589 aa12.17□□□□□ -0.46
IDH3A-217ENST00000559889 RTCBQ9Y3I0 505 aaKnown RBP12.17□□□□□ -0.46
IDH3A-217ENST00000559889 CD2APQ9Y5K6 639 aa12.16□□□□□ -0.46
IDH3A-217ENST00000559889 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
IDH3A-217ENST00000559889 GPR162Q16538 588 aa12.16□□□□□ -0.46
IDH3A-217ENST00000559889 TRAPPC3LQ5T215 181 aa12.16□□□□□ -0.46
IDH3A-217ENST00000559889 ARHGEF1Q92888 912 aaKnown RBP12.16□□□□□ -0.46
IDH3A-217ENST00000559889 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
IDH3A-217ENST00000559889 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
IDH3A-217ENST00000559889 MYH14Q7Z406 1995 aaKnown RBP12.15□□□□□ -0.46
IDH3A-217ENST00000559889 YBX3P16989 372 aaKnown RBP eCLIP12.15□□□□□ -0.46
IDH3A-217ENST00000559889 ADRA2BP18089 450 aa12.15□□□□□ -0.46
IDH3A-217ENST00000559889 SLC39A6Q13433 755 aa12.15□□□□□ -0.46
IDH3A-217ENST00000559889 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
IDH3A-217ENST00000559889 TJP1Q07157 1748 aa12.15□□□□□ -0.47
IDH3A-217ENST00000559889 PHACTR3Q96KR7 559 aa12.14□□□□□ -0.47
IDH3A-217ENST00000559889 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
IDH3A-217ENST00000559889 INTS5Q6P9B9 1019 aaKnown RBP12.14□□□□□ -0.47
IDH3A-217ENST00000559889 IL17REQ8NFR9 667 aa12.14□□□□□ -0.47
IDH3A-217ENST00000559889 MMP10P09238 476 aa12.13□□□□□ -0.47
IDH3A-217ENST00000559889 GYS1P13807 737 aa12.13□□□□□ -0.47
IDH3A-217ENST00000559889 CFAP53Q96M91 514 aa12.13□□□□□ -0.47
IDH3A-217ENST00000559889 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
IDH3A-217ENST00000559889 PELP1Q8IZL8 1130 aaKnown RBP12.13□□□□□ -0.47
IDH3A-217ENST00000559889 GAS2L2Q8NHY3 880 aa12.13□□□□□ -0.47
IDH3A-217ENST00000559889 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
IDH3A-217ENST00000559889 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
IDH3A-217ENST00000559889 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
IDH3A-217ENST00000559889 RFC4P35249 363 aa12.12□□□□□ -0.47
IDH3A-217ENST00000559889 NLGN1Q8N2Q7 840 aa12.12□□□□□ -0.47
IDH3A-217ENST00000559889 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
IDH3A-217ENST00000559889 PRKRIP1Q9H875 184 aaPredicted RBP12.12□□□□□ -0.47
IDH3A-217ENST00000559889 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
IDH3A-217ENST00000559889 C4AP0C0L4 1744 aa12.11□□□□□ -0.47
IDH3A-217ENST00000559889 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
IDH3A-217ENST00000559889 NUDCQ9Y266 331 aa12.11□□□□□ -0.47
IDH3A-217ENST00000559889 U2AF1L5P0DN76 240 aaPredicted RBP12.1□□□□□ -0.47
IDH3A-217ENST00000559889 U2AF1Q01081 240 aaKnown RBP eCLIP12.1□□□□□ -0.47
IDH3A-217ENST00000559889 VSIG10Q8N0Z9 540 aa12.1□□□□□ -0.47
IDH3A-217ENST00000559889 CCDC87Q9NVE4 849 aa12.1□□□□□ -0.47
IDH3A-217ENST00000559889 SRP68Q9UHB9 627 aaKnown RBP12.1□□□□□ -0.47
IDH3A-217ENST00000559889 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
IDH3A-217ENST00000559889 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
IDH3A-217ENST00000559889 CHD4Q14839 1912 aa12.09□□□□□ -0.47
IDH3A-217ENST00000559889 FCHSD2O94868 740 aa12.09□□□□□ -0.47
IDH3A-217ENST00000559889 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
IDH3A-217ENST00000559889 GRIN3BO60391 1043 aa12.09□□□□□ -0.47
IDH3A-217ENST00000559889 FKBP8Q14318 412 aa12.09□□□□□ -0.47
IDH3A-217ENST00000559889 CCDC184Q52MB2 194 aa12.09□□□□□ -0.47
IDH3A-217ENST00000559889 ZNF790Q6PG37 636 aa12.09□□□□□ -0.47
IDH3A-217ENST00000559889 C10orf71Q711Q0 1435 aa12.08□□□□□ -0.48
IDH3A-217ENST00000559889 TEFQ10587 303 aa12.08□□□□□ -0.48
IDH3A-217ENST00000559889 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms