RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 TEFQ10587 303 aa18.41■□□□□ 0.54
RABGGTA-209ENST00000559551 ALDH1L2Q3SY69 923 aa18.41■□□□□ 0.54
RABGGTA-209ENST00000559551 CRBNQ96SW2 442 aa18.41■□□□□ 0.54
RABGGTA-209ENST00000559551 ITGB4P16144 1822 aa18.41■□□□□ 0.54
RABGGTA-209ENST00000559551 ERICH6BQ5W0A0 696 aa18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 TSHZ2Q9NRE2 1034 aa18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 CACNA1FO60840 1977 aa18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 NKX1-1Q15270 411 aaPredicted RBP18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 MRPL50Q8N5N7 158 aaKnown RBP18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 FRAT1Q92837 279 aaPredicted RBP18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 DCAF5Q96JK2 942 aa18.4■□□□□ 0.54
RABGGTA-209ENST00000559551 RLBP1P12271 317 aa18.39■□□□□ 0.53
RABGGTA-209ENST00000559551 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
RABGGTA-209ENST00000559551 ZNF428Q96B54 188 aa18.39■□□□□ 0.53
RABGGTA-209ENST00000559551 NGLY1Q96IV0 654 aa18.39■□□□□ 0.53
RABGGTA-209ENST00000559551 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
RABGGTA-209ENST00000559551 GLI3P10071 1580 aa18.39■□□□□ 0.53
RABGGTA-209ENST00000559551 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 BRPF1P55201 1214 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 EIF4A1P60842 406 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 C5P01031 1676 aa18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 NFATC2IPQ8NCF5 419 aa18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 DDX54Q8TDD1 881 aaKnown RBP18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 PANK1Q8TE04 598 aa18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 KAT6BQ8WYB5 2073 aa18.38■□□□□ 0.53
RABGGTA-209ENST00000559551 PAPPAQ13219 1627 aa18.37■□□□□ 0.53
RABGGTA-209ENST00000559551 NOB1Q9ULX3 412 aaKnown RBP18.37■□□□□ 0.53
RABGGTA-209ENST00000559551 HEG1Q9ULI3 1381 aa18.37■□□□□ 0.53
RABGGTA-209ENST00000559551 UBR2Q8IWV8 1755 aa18.37■□□□□ 0.53
RABGGTA-209ENST00000559551 TNS2Q63HR2 1409 aa18.36■□□□□ 0.53
RABGGTA-209ENST00000559551 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-209ENST00000559551 SLC39A6Q13433 755 aa18.35■□□□□ 0.53
RABGGTA-209ENST00000559551 THRAP3Q9Y2W1 955 aaKnown RBP18.35■□□□□ 0.53
RABGGTA-209ENST00000559551 TRIM27P14373 513 aa18.35■□□□□ 0.53
RABGGTA-209ENST00000559551 PDE3AQ14432 1141 aa18.35■□□□□ 0.53
RABGGTA-209ENST00000559551 VPS72Q15906 364 aa18.35■□□□□ 0.53
RABGGTA-209ENST00000559551 ANP32EQ9BTT0 268 aa18.35■□□□□ 0.53
RABGGTA-209ENST00000559551 PPP4R2Q9NY27 417 aa18.34■□□□□ 0.53
RABGGTA-209ENST00000559551 DOT1LQ8TEK3 1739 aa18.34■□□□□ 0.53
RABGGTA-209ENST00000559551 ZKSCAN2Q63HK3 967 aa18.34■□□□□ 0.53
RABGGTA-209ENST00000559551 BARGINQ6ZT62 677 aa18.34■□□□□ 0.53
RABGGTA-209ENST00000559551 CLUAP1Q96AJ1 413 aa18.34■□□□□ 0.53
RABGGTA-209ENST00000559551 USP21Q9UK80 565 aa18.33■□□□□ 0.52
RABGGTA-209ENST00000559551 RGS12O14924 1447 aa18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 PRAMEF22A3QJZ6 481 aa18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 CANXP27824 592 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 KIF16BQ96L93 1317 aa18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 ATF7IPQ6VMQ6 1270 aa18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 COG6Q9Y2V7 657 aa18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 CCDC9Q9Y3X0 531 aaKnown RBP18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 THSD7AQ9UPZ6 1657 aa18.32■□□□□ 0.52
RABGGTA-209ENST00000559551 EXOC5O00471 708 aa18.31■□□□□ 0.52
RABGGTA-209ENST00000559551 CABP4P57796 275 aa18.31■□□□□ 0.52
RABGGTA-209ENST00000559551 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
RABGGTA-209ENST00000559551 AFF2P51816 1311 aa18.31■□□□□ 0.52
RABGGTA-209ENST00000559551 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
RABGGTA-209ENST00000559551 G2E3Q7L622 706 aa18.3■□□□□ 0.52
RABGGTA-209ENST00000559551 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
RABGGTA-209ENST00000559551 CDCA7Q9BWT1 371 aaPredicted RBP18.3■□□□□ 0.52
RABGGTA-209ENST00000559551 KCPQ6ZWJ8 1503 aa18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 GIGYF1O75420 1035 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 FAM98CQ17RN3 349 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 SOS1Q07889 1333 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 MEX3CQ5U5Q3 659 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 DZIP1LQ8IYY4 767 aaKnown RBP18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
RABGGTA-209ENST00000559551 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
RABGGTA-209ENST00000559551 SLC4A2P04920 1241 aa18.28■□□□□ 0.52
RABGGTA-209ENST00000559551 DDB1Q16531 1140 aa18.28■□□□□ 0.52
RABGGTA-209ENST00000559551 ATRNO75882 1429 aa18.27■□□□□ 0.52
RABGGTA-209ENST00000559551 HOXB7P09629 217 aa18.27■□□□□ 0.52
RABGGTA-209ENST00000559551 ARHGAP45Q92619 1136 aa18.27■□□□□ 0.52
RABGGTA-209ENST00000559551 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
RABGGTA-209ENST00000559551 TMEM57Q8N5G2 664 aa18.26■□□□□ 0.51
RABGGTA-209ENST00000559551 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
RABGGTA-209ENST00000559551 EIF2S2P20042 333 aaKnown RBP18.26■□□□□ 0.51
RABGGTA-209ENST00000559551 CCDC30Q5VVM6 783 aa18.26■□□□□ 0.51
RABGGTA-209ENST00000559551 RGS17Q9UGC6 210 aaPredicted RBP18.26■□□□□ 0.51
RABGGTA-209ENST00000559551 ABCC4O15439 1325 aa18.25■□□□□ 0.51
RABGGTA-209ENST00000559551 MVPQ14764 893 aaKnown RBP18.25■□□□□ 0.51
RABGGTA-209ENST00000559551 PIGBQ92521 554 aa18.25■□□□□ 0.51
RABGGTA-209ENST00000559551 N4BP2Q86UW6 1770 aaPredicted RBP18.25■□□□□ 0.51
RABGGTA-209ENST00000559551 BCL9O00512 1426 aa18.24■□□□□ 0.51
RABGGTA-209ENST00000559551 ANXA1P04083 346 aa18.23■□□□□ 0.51
RABGGTA-209ENST00000559551 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
RABGGTA-209ENST00000559551 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
RABGGTA-209ENST00000559551 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
RABGGTA-209ENST00000559551 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
RABGGTA-209ENST00000559551 PHAXQ9H814 394 aaKnown RBP18.22■□□□□ 0.51
RABGGTA-209ENST00000559551 STK31Q9BXU1 1019 aa18.22■□□□□ 0.51
RABGGTA-209ENST00000559551 TMOD3Q9NYL9 352 aa18.22■□□□□ 0.51
RABGGTA-209ENST00000559551 USP16Q9Y5T5 823 aa18.22■□□□□ 0.51
RABGGTA-209ENST00000559551 PDIA6Q15084 440 aa18.21■□□□□ 0.51
RABGGTA-209ENST00000559551 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.51
RABGGTA-209ENST00000559551 ASAP1Q9ULH1 1129 aa18.21■□□□□ 0.51
RABGGTA-209ENST00000559551 SOCS7O14512 581 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms