RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
USP3-212ENST00000559276 CEP350Q5VT06 3117 aa8.02□□□□□ -1.13
USP3-212ENST00000559276 ADCY9O60503 1353 aa8.02□□□□□ -1.13
USP3-212ENST00000559276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.02□□□□□ -1.13
USP3-212ENST00000559276 TNNT2P45379 298 aaPredicted RBP8.02□□□□□ -1.13
USP3-212ENST00000559276 FLAD1Q8NFF5 587 aa8.02□□□□□ -1.13
USP3-212ENST00000559276 KDM6AO15550 1401 aaPredicted RBP8.02□□□□□ -1.13
USP3-212ENST00000559276 C4AP0C0L4 1744 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 MYH14Q7Z406 1995 aaKnown RBP8.01□□□□□ -1.13
USP3-212ENST00000559276 PHF14O94880 888 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 HSPA5P11021 654 aaKnown RBP8.01□□□□□ -1.13
USP3-212ENST00000559276 SSFA2P28290 1259 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 IFNL2Q8IZJ0 200 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 AK7Q96M32 723 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 PANK3Q9H999 370 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 TMOD3Q9NYL9 352 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 ADAMTS7Q9UKP4 1686 aa8.01□□□□□ -1.13
USP3-212ENST00000559276 CICQ96RK0 1608 aaPredicted RBP8□□□□□ -1.13
USP3-212ENST00000559276 N4BP2Q86UW6 1770 aaPredicted RBP8□□□□□ -1.13
USP3-212ENST00000559276 SENP3-EIF4A1A0A087X0R7 540 aa8□□□□□ -1.13
USP3-212ENST00000559276 GRIN3BO60391 1043 aa8□□□□□ -1.13
USP3-212ENST00000559276 ATP6V1AP38606 617 aa8□□□□□ -1.13
USP3-212ENST00000559276 AEBP1Q8IUX7 1158 aa8□□□□□ -1.13
USP3-212ENST00000559276 YTHDC1Q96MU7 727 aaKnown RBP8□□□□□ -1.13
USP3-212ENST00000559276 ATP10DQ9P241 1426 aa8□□□□□ -1.13
USP3-212ENST00000559276 TJP1Q07157 1748 aa8□□□□□ -1.13
USP3-212ENST00000559276 BRCA1P38398 1863 aaKnown RBP8□□□□□ -1.13
USP3-212ENST00000559276 GNPATO15228 680 aa7.99□□□□□ -1.13
USP3-212ENST00000559276 WWC3Q9ULE0 1092 aa7.99□□□□□ -1.13
USP3-212ENST00000559276 SCN11AQ9UI33 1791 aa7.99□□□□□ -1.13
USP3-212ENST00000559276 PXDNLA1KZ92 1463 aa7.99□□□□□ -1.13
USP3-212ENST00000559276 ERVV-2B6SEH9 535 aa7.98□□□□□ -1.13
USP3-212ENST00000559276 GIGYF1O75420 1035 aaPredicted RBP7.98□□□□□ -1.13
USP3-212ENST00000559276 EIF4G2P78344 907 aaKnown RBP eCLIP7.98□□□□□ -1.13
USP3-212ENST00000559276 POLR3GLQ9BT43 218 aa7.98□□□□□ -1.13
USP3-212ENST00000559276 VIRMAQ69YN4 1812 aaKnown RBP7.98□□□□□ -1.13
USP3-212ENST00000559276 C10orf71Q711Q0 1435 aa7.97□□□□□ -1.13
USP3-212ENST00000559276 MMP10P09238 476 aa7.97□□□□□ -1.13
USP3-212ENST00000559276 HMGB2P26583 209 aaKnown RBP7.97□□□□□ -1.13
USP3-212ENST00000559276 IL13P35225 146 aa7.97□□□□□ -1.13
USP3-212ENST00000559276 ARHGEF1Q92888 912 aaKnown RBP7.97□□□□□ -1.13
USP3-212ENST00000559276 DCAF5Q96JK2 942 aa7.97□□□□□ -1.13
USP3-212ENST00000559276 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
USP3-212ENST00000559276 CNTNAP4Q9C0A0 1308 aa7.97□□□□□ -1.13
USP3-212ENST00000559276 GYS1P13807 737 aa7.96□□□□□ -1.14
USP3-212ENST00000559276 PLEKHO1Q53GL0 409 aaPredicted RBP7.96□□□□□ -1.14
USP3-212ENST00000559276 RC3H1Q5TC82 1133 aaKnown RBP7.96□□□□□ -1.14
USP3-212ENST00000559276 ZNF530Q6P9A1 599 aaPredicted RBP7.96□□□□□ -1.14
USP3-212ENST00000559276 RPS6KA4O75676 772 aa7.95□□□□□ -1.14
USP3-212ENST00000559276 KCNA3P22001 575 aa7.95□□□□□ -1.14
USP3-212ENST00000559276 AMOTQ4VCS5 1084 aa7.95□□□□□ -1.14
USP3-212ENST00000559276 TRAPPC3LQ5T215 181 aa7.95□□□□□ -1.14
USP3-212ENST00000559276 NFATC2IPQ8NCF5 419 aa7.95□□□□□ -1.14
USP3-212ENST00000559276 RBM42Q9BTD8 480 aaKnown RBP7.95□□□□□ -1.14
USP3-212ENST00000559276 RTCBQ9Y3I0 505 aaKnown RBP7.95□□□□□ -1.14
USP3-212ENST00000559276 MRC1P22897 1456 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 ARFGEF1Q9Y6D6 1849 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 KCPQ6ZWJ8 1503 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 A0A0G2JLW4 131 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 KIF3CO14782 793 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 PER1O15534 1290 aaPredicted RBP7.94□□□□□ -1.14
USP3-212ENST00000559276 HSP90AB1P08238 724 aaKnown RBP7.94□□□□□ -1.14
USP3-212ENST00000559276 ADRA2BP18089 450 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 MTHFSP49914 203 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 CABP4P57796 275 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 SULT6B1Q6IMI4 303 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 INTS5Q6P9B9 1019 aaKnown RBP7.94□□□□□ -1.14
USP3-212ENST00000559276 MORC1Q86VD1 984 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 NLGN1Q8N2Q7 840 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 LGR6Q9HBX8 967 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 KIF7Q2M1P5 1343 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 UBR2Q8IWV8 1755 aa7.94□□□□□ -1.14
USP3-212ENST00000559276 PTCD1O75127 700 aaKnown RBP7.93□□□□□ -1.14
USP3-212ENST00000559276 DPEP1P16444 411 aa7.93□□□□□ -1.14
USP3-212ENST00000559276 CRKLP46109 303 aaKnown RBP7.93□□□□□ -1.14
USP3-212ENST00000559276 TGFB2P61812 414 aa7.93□□□□□ -1.14
USP3-212ENST00000559276 DDR1Q08345 913 aa7.93□□□□□ -1.14
USP3-212ENST00000559276 FKBP8Q14318 412 aa7.93□□□□□ -1.14
USP3-212ENST00000559276 ZNF526Q8TF50 670 aaPredicted RBP7.93□□□□□ -1.14
USP3-212ENST00000559276 GPBP1L1Q9HC44 474 aaPredicted RBP7.93□□□□□ -1.14
USP3-212ENST00000559276 SRP68Q9UHB9 627 aaKnown RBP7.93□□□□□ -1.14
USP3-212ENST00000559276 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
USP3-212ENST00000559276 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
USP3-212ENST00000559276 AFDNP55196 1824 aaKnown RBP7.92□□□□□ -1.14
USP3-212ENST00000559276 DAXXQ9UER7 740 aaPredicted RBP7.92□□□□□ -1.14
USP3-212ENST00000559276 USP42Q9H9J4 1324 aaKnown RBP7.92□□□□□ -1.14
USP3-212ENST00000559276 SIPA1L3O60292 1781 aaPredicted RBP7.92□□□□□ -1.14
USP3-212ENST00000559276 TM4SF1P30408 202 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 RFC4P35249 363 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 AKAP4Q5JQC9 854 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 C1orf141Q5JVX7 400 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 DNAJC10Q8IXB1 793 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 SLC52A2Q9HAB3 445 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 KNSTRNQ9Y448 316 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 SBF1O95248 1867 aa7.91□□□□□ -1.14
USP3-212ENST00000559276 DLEC1Q9Y238 1755 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 SOS1Q07889 1333 aaPredicted RBP7.9□□□□□ -1.14
USP3-212ENST00000559276 CCER2I3L3R5 266 aa7.9□□□□□ -1.14
USP3-212ENST00000559276 POLRMTO00411 1230 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms