RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.32
RABGGTA-207ENST00000558936 AKAP4Q5JQC9 854 aa17.02■□□□□ 0.32
RABGGTA-207ENST00000558936 NFATC2IPQ8NCF5 419 aa17.02■□□□□ 0.32
RABGGTA-207ENST00000558936 PNPLA7Q6ZV29 1317 aa17.01■□□□□ 0.31
RABGGTA-207ENST00000558936 ZNF831Q5JPB2 1677 aa17.01■□□□□ 0.31
RABGGTA-207ENST00000558936 RALBP1Q15311 655 aa17.01■□□□□ 0.31
RABGGTA-207ENST00000558936 SLC27A3Q5K4L6 730 aa17.01■□□□□ 0.31
RABGGTA-207ENST00000558936 LINC00116Q8NCU8 138 aa17.01■□□□□ 0.31
RABGGTA-207ENST00000558936 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
RABGGTA-207ENST00000558936 UBR2Q8IWV8 1755 aa17■□□□□ 0.31
RABGGTA-207ENST00000558936 SGIP1Q9BQI5 828 aa17■□□□□ 0.31
RABGGTA-207ENST00000558936 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
RABGGTA-207ENST00000558936 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
RABGGTA-207ENST00000558936 PTGER2P43116 358 aa16.99■□□□□ 0.31
RABGGTA-207ENST00000558936 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
RABGGTA-207ENST00000558936 KCPQ6ZWJ8 1503 aa16.99■□□□□ 0.31
RABGGTA-207ENST00000558936 LOC102724428A0A0B4J2F2 783 aa16.98■□□□□ 0.31
RABGGTA-207ENST00000558936 SIK1P57059 783 aa16.98■□□□□ 0.31
RABGGTA-207ENST00000558936 CICQ96RK0 1608 aaPredicted RBP16.98■□□□□ 0.31
RABGGTA-207ENST00000558936 CEMIPQ8WUJ3 1361 aa16.98■□□□□ 0.31
RABGGTA-207ENST00000558936 MYBBP1AQ9BQG0 1328 aaKnown RBP16.97■□□□□ 0.31
RABGGTA-207ENST00000558936 FCHSD2O94868 740 aa16.97■□□□□ 0.31
RABGGTA-207ENST00000558936 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
RABGGTA-207ENST00000558936 CFAP53Q96M91 514 aa16.97■□□□□ 0.31
RABGGTA-207ENST00000558936 SLC52A2Q9HAB3 445 aa16.97■□□□□ 0.31
RABGGTA-207ENST00000558936 ZBTB7AO95365 584 aa16.96■□□□□ 0.31
RABGGTA-207ENST00000558936 HSP90AB1P08238 724 aaKnown RBP16.96■□□□□ 0.31
RABGGTA-207ENST00000558936 CABP4P57796 275 aa16.96■□□□□ 0.31
RABGGTA-207ENST00000558936 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
RABGGTA-207ENST00000558936 COL23A1Q86Y22 540 aaPredicted RBP16.96■□□□□ 0.31
RABGGTA-207ENST00000558936 STK32BQ9NY57 414 aa16.96■□□□□ 0.31
RABGGTA-207ENST00000558936 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
RABGGTA-207ENST00000558936 KCNQ3O43525 872 aa16.95■□□□□ 0.3
RABGGTA-207ENST00000558936 DCTN1Q14203 1278 aa16.95■□□□□ 0.3
RABGGTA-207ENST00000558936 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-207ENST00000558936 ATF5Q9Y2D1 282 aaPredicted RBP16.94■□□□□ 0.3
RABGGTA-207ENST00000558936 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
RABGGTA-207ENST00000558936 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
RABGGTA-207ENST00000558936 MCM10Q7L590 875 aa16.92■□□□□ 0.3
RABGGTA-207ENST00000558936 NUDCQ9Y266 331 aa16.92■□□□□ 0.3
RABGGTA-207ENST00000558936 PTCD1O75127 700 aaKnown RBP16.91■□□□□ 0.3
RABGGTA-207ENST00000558936 GAS2L2Q8NHY3 880 aa16.91■□□□□ 0.3
RABGGTA-207ENST00000558936 UTRNP46939 3433 aa16.91■□□□□ 0.3
RABGGTA-207ENST00000558936 C4AP0C0L4 1744 aa16.9■□□□□ 0.3
RABGGTA-207ENST00000558936 THUMPD2Q9BTF0 503 aaKnown RBP16.9■□□□□ 0.3
RABGGTA-207ENST00000558936 ADAMTS8Q9UP79 889 aa16.9■□□□□ 0.3
RABGGTA-207ENST00000558936 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
RABGGTA-207ENST00000558936 TFCP2L1Q9NZI6 479 aa16.89■□□□□ 0.29
RABGGTA-207ENST00000558936 INTS5Q6P9B9 1019 aaKnown RBP16.88■□□□□ 0.29
RABGGTA-207ENST00000558936 DNAJC10Q8IXB1 793 aa16.88■□□□□ 0.29
RABGGTA-207ENST00000558936 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
RABGGTA-207ENST00000558936 PRAMEF22A3QJZ6 481 aa16.87■□□□□ 0.29
RABGGTA-207ENST00000558936 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
RABGGTA-207ENST00000558936 ZNF496Q96IT1 587 aaPredicted RBP16.87■□□□□ 0.29
RABGGTA-207ENST00000558936 MTFR1LQ9H019 292 aa16.87■□□□□ 0.29
RABGGTA-207ENST00000558936 SPON1Q9HCB6 807 aa16.87■□□□□ 0.29
RABGGTA-207ENST00000558936 MIS18AQ9NYP9 233 aa16.86■□□□□ 0.29
RABGGTA-207ENST00000558936 GOLGB1Q14789 3259 aaKnown RBP16.86■□□□□ 0.29
RABGGTA-207ENST00000558936 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.85■□□□□ 0.29
RABGGTA-207ENST00000558936 NFE2L2Q16236 605 aa16.85■□□□□ 0.29
RABGGTA-207ENST00000558936 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
RABGGTA-207ENST00000558936 CNTNAP4Q9C0A0 1308 aa16.85■□□□□ 0.29
RABGGTA-207ENST00000558936 CYP19A1P11511 503 aaPredicted RBP16.84■□□□□ 0.29
RABGGTA-207ENST00000558936 TRIM35Q9UPQ4 493 aa16.84■□□□□ 0.29
RABGGTA-207ENST00000558936 PHF14O94880 888 aa16.83■□□□□ 0.28
RABGGTA-207ENST00000558936 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-207ENST00000558936 CRKLP46109 303 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-207ENST00000558936 RC3H1Q5TC82 1133 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-207ENST00000558936 MSL1Q68DK7 614 aa16.83■□□□□ 0.28
RABGGTA-207ENST00000558936 RRP7AQ9Y3A4 280 aaKnown RBP16.83■□□□□ 0.28
RABGGTA-207ENST00000558936 GNPATO15228 680 aa16.82■□□□□ 0.28
RABGGTA-207ENST00000558936 HTATSF1O43719 755 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-207ENST00000558936 ARHGEF1Q92888 912 aaKnown RBP16.82■□□□□ 0.28
RABGGTA-207ENST00000558936 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
RABGGTA-207ENST00000558936 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
RABGGTA-207ENST00000558936 SSFA2P28290 1259 aa16.81■□□□□ 0.28
RABGGTA-207ENST00000558936 PNISRQ8TF01 805 aaKnown RBP16.81■□□□□ 0.28
RABGGTA-207ENST00000558936 SLC16A10Q8TF71 515 aa16.81■□□□□ 0.28
RABGGTA-207ENST00000558936 AK7Q96M32 723 aa16.81■□□□□ 0.28
RABGGTA-207ENST00000558936 ZBTB1Q9Y2K1 713 aa16.81■□□□□ 0.28
RABGGTA-207ENST00000558936 SENP3-EIF4A1A0A087X0R7 540 aa16.8■□□□□ 0.28
RABGGTA-207ENST00000558936 USP16Q9Y5T5 823 aa16.8■□□□□ 0.28
RABGGTA-207ENST00000558936 KIAA1551Q9HCM1 1747 aa16.79■□□□□ 0.28
RABGGTA-207ENST00000558936 BTBD11A6QL63 1104 aa16.79■□□□□ 0.28
RABGGTA-207ENST00000558936 HMGB2P26583 209 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-207ENST00000558936 TEFQ10587 303 aa16.79■□□□□ 0.28
RABGGTA-207ENST00000558936 SRP68Q9UHB9 627 aaKnown RBP16.79■□□□□ 0.28
RABGGTA-207ENST00000558936 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-207ENST00000558936 RIPK4P57078 832 aa16.78■□□□□ 0.28
RABGGTA-207ENST00000558936 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
RABGGTA-207ENST00000558936 FHDC1Q9C0D6 1143 aaPredicted RBP16.78■□□□□ 0.28
RABGGTA-207ENST00000558936 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
RABGGTA-207ENST00000558936 GYS1P13807 737 aa16.77■□□□□ 0.28
RABGGTA-207ENST00000558936 PIP4K2AP48426 406 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-207ENST00000558936 TAF7Q15545 349 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-207ENST00000558936 RUNDC1Q96C34 613 aa16.77■□□□□ 0.28
RABGGTA-207ENST00000558936 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
RABGGTA-207ENST00000558936 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.28
RABGGTA-207ENST00000558936 A1BGP04217 495 aa16.76■□□□□ 0.27
RABGGTA-207ENST00000558936 ARXQ96QS3 562 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms