RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 CHIC2Q9UKJ5 165 aa12.09□□□□□ -0.47
SCG3-203ENST00000558709 ADGRL2O95490 1459 aa12.08□□□□□ -0.47
SCG3-203ENST00000558709 PNPLA6Q8IY17 1366 aa12.08□□□□□ -0.48
SCG3-203ENST00000558709 RBM6P78332 1123 aaKnown RBP12.08□□□□□ -0.48
SCG3-203ENST00000558709 NUTM1Q86Y26 1132 aa12.08□□□□□ -0.48
SCG3-203ENST00000558709 FAM160A2Q8N612 972 aaPredicted RBP12.08□□□□□ -0.48
SCG3-203ENST00000558709 BRWD3Q6RI45 1802 aa12.08□□□□□ -0.48
SCG3-203ENST00000558709 ATAD2Q6PL18 1390 aa12.07□□□□□ -0.48
SCG3-203ENST00000558709 S1PR4O95977 384 aa12.07□□□□□ -0.48
SCG3-203ENST00000558709 GUCA2AQ02747 115 aa12.07□□□□□ -0.48
SCG3-203ENST00000558709 QTRT2Q9H974 415 aaKnown RBP12.07□□□□□ -0.48
SCG3-203ENST00000558709 SPHKAPQ2M3C7 1700 aa12.06□□□□□ -0.48
SCG3-203ENST00000558709 RNF223E7ERA6 249 aa12.06□□□□□ -0.48
SCG3-203ENST00000558709 FMNL1O95466 1100 aaPredicted RBP12.06□□□□□ -0.48
SCG3-203ENST00000558709 COL22A1Q8NFW1 1626 aaPredicted RBP12.06□□□□□ -0.48
SCG3-203ENST00000558709 GGCXP38435 758 aa12.05□□□□□ -0.48
SCG3-203ENST00000558709 Q3C1V9 767 aa12.05□□□□□ -0.48
SCG3-203ENST00000558709 MSS51Q4VC12 460 aa12.05□□□□□ -0.48
SCG3-203ENST00000558709 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
SCG3-203ENST00000558709 SLC6A16Q9GZN6 736 aa12.05□□□□□ -0.48
SCG3-203ENST00000558709 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.04□□□□□ -0.48
SCG3-203ENST00000558709 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
SCG3-203ENST00000558709 DDX17Q92841 729 aaKnown RBP12.04□□□□□ -0.48
SCG3-203ENST00000558709 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
SCG3-203ENST00000558709 PCDHGC3Q9UN70 934 aa12.04□□□□□ -0.48
SCG3-203ENST00000558709 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
SCG3-203ENST00000558709 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
SCG3-203ENST00000558709 EMID1Q96A84 441 aaPredicted RBP12.03□□□□□ -0.48
SCG3-203ENST00000558709 LRRC59Q96AG4 307 aaKnown RBP12.03□□□□□ -0.48
SCG3-203ENST00000558709 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
SCG3-203ENST00000558709 LRP5O75197 1615 aa12.03□□□□□ -0.48
SCG3-203ENST00000558709 ADGRL3Q9HAR2 1447 aa12.03□□□□□ -0.48
SCG3-203ENST00000558709 ANKRD50Q9ULJ7 1429 aa12.03□□□□□ -0.48
SCG3-203ENST00000558709 GJA5P36382 358 aa12.02□□□□□ -0.49
SCG3-203ENST00000558709 ANKLE1Q8NAG6 615 aa12.02□□□□□ -0.49
SCG3-203ENST00000558709 NGLY1Q96IV0 654 aa12.02□□□□□ -0.49
SCG3-203ENST00000558709 KIF1BO60333 1816 aa12.02□□□□□ -0.49
SCG3-203ENST00000558709 ADAMTS2O95450 1211 aa12.01□□□□□ -0.49
SCG3-203ENST00000558709 FDX1P10109 184 aa12.01□□□□□ -0.49
SCG3-203ENST00000558709 NDUFV2P19404 249 aa12.01□□□□□ -0.49
SCG3-203ENST00000558709 KDM4CQ9H3R0 1056 aa12.01□□□□□ -0.49
SCG3-203ENST00000558709 PRDM9Q9NQV7 894 aa12.01□□□□□ -0.49
SCG3-203ENST00000558709 PPEF1O14829 653 aaPredicted RBP12□□□□□ -0.49
SCG3-203ENST00000558709 DIXDC1Q155Q3 683 aa12□□□□□ -0.49
SCG3-203ENST00000558709 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
SCG3-203ENST00000558709 USB1Q9BQ65 265 aaKnown RBP11.99□□□□□ -0.49
SCG3-203ENST00000558709 ATRNO75882 1429 aa11.99□□□□□ -0.49
SCG3-203ENST00000558709 PTCH1Q13635 1447 aa11.98□□□□□ -0.49
SCG3-203ENST00000558709 SPTLC1O15269 473 aa11.98□□□□□ -0.49
SCG3-203ENST00000558709 MMP16P51512 607 aa11.98□□□□□ -0.49
SCG3-203ENST00000558709 USP21Q9UK80 565 aa11.98□□□□□ -0.49
SCG3-203ENST00000558709 C1orf167Q5SNV9 1468 aa11.97□□□□□ -0.49
SCG3-203ENST00000558709 METP08581 1390 aa11.97□□□□□ -0.49
SCG3-203ENST00000558709 PLA2G2CQ5R387 149 aa11.97□□□□□ -0.49
SCG3-203ENST00000558709 MYSM1Q5VVJ2 828 aa11.97□□□□□ -0.49
SCG3-203ENST00000558709 SYMPKQ92797 1274 aaKnown RBP11.97□□□□□ -0.49
SCG3-203ENST00000558709 TRPC5Q9UL62 973 aaPredicted RBP11.97□□□□□ -0.49
SCG3-203ENST00000558709 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
SCG3-203ENST00000558709 PRKD2Q9BZL6 878 aa11.96□□□□□ -0.49
SCG3-203ENST00000558709 CLTCL1P53675 1640 aa11.96□□□□□ -0.5
SCG3-203ENST00000558709 GLI3P10071 1580 aa11.96□□□□□ -0.5
SCG3-203ENST00000558709 NEXMIFQ5QGS0 1516 aa11.96□□□□□ -0.5
SCG3-203ENST00000558709 DXOO77932 396 aaKnown RBP11.95□□□□□ -0.5
SCG3-203ENST00000558709 RETREG3Q86VR2 466 aa11.95□□□□□ -0.5
SCG3-203ENST00000558709 MYOM2P54296 1465 aa11.95□□□□□ -0.5
SCG3-203ENST00000558709 FAM117AQ9C073 453 aa11.94□□□□□ -0.5
SCG3-203ENST00000558709 PLCH1Q4KWH8 1693 aa11.94□□□□□ -0.5
SCG3-203ENST00000558709 SOS2Q07890 1332 aaPredicted RBP11.93□□□□□ -0.5
SCG3-203ENST00000558709 PLEKHG3A1L390 1219 aa11.93□□□□□ -0.5
SCG3-203ENST00000558709 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
SCG3-203ENST00000558709 FNBP4Q8N3X1 1017 aaPredicted RBP11.93□□□□□ -0.5
SCG3-203ENST00000558709 PCDHB15Q9Y5E8 787 aa11.93□□□□□ -0.5
SCG3-203ENST00000558709 BCL9LQ86UU0 1499 aa11.93□□□□□ -0.5
SCG3-203ENST00000558709 LIAT1Q6ZQX7 453 aa11.92□□□□□ -0.5
SCG3-203ENST00000558709 RIC3Q7Z5B4 369 aa11.92□□□□□ -0.5
SCG3-203ENST00000558709 CCDC125Q86Z20 511 aa11.92□□□□□ -0.5
SCG3-203ENST00000558709 LIMD1Q9UGP4 676 aa11.92□□□□□ -0.5
SCG3-203ENST00000558709 FCF1Q9Y324 198 aaKnown RBP11.92□□□□□ -0.5
SCG3-203ENST00000558709 RGPD8O14715 1765 aaPredicted RBP11.92□□□□□ -0.5
SCG3-203ENST00000558709 PPLO60437 1756 aa11.92□□□□□ -0.5
SCG3-203ENST00000558709 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
SCG3-203ENST00000558709 BRPF1P55201 1214 aaPredicted RBP11.91□□□□□ -0.5
SCG3-203ENST00000558709 FAM50AQ14320 339 aaKnown RBP11.91□□□□□ -0.5
SCG3-203ENST00000558709 BLMP54132 1417 aaPredicted RBP11.91□□□□□ -0.5
SCG3-203ENST00000558709 PXDNQ92626 1479 aa11.9□□□□□ -0.5
SCG3-203ENST00000558709 USP32Q8NFA0 1604 aa11.9□□□□□ -0.5
SCG3-203ENST00000558709 CDC42BPGQ6DT37 1551 aa11.9□□□□□ -0.5
SCG3-203ENST00000558709 DDRGK1Q96HY6 314 aa11.9□□□□□ -0.5
SCG3-203ENST00000558709 ORAI2Q96SN7 254 aa11.9□□□□□ -0.5
SCG3-203ENST00000558709 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
SCG3-203ENST00000558709 LOC105371045A0A1W2PR82 267 aa11.89□□□□□ -0.51
SCG3-203ENST00000558709 C6orf229H3BNL8 230 aa11.89□□□□□ -0.51
SCG3-203ENST00000558709 JUNDP17535 347 aa11.89□□□□□ -0.51
SCG3-203ENST00000558709 MTMR2Q13614 643 aa11.89□□□□□ -0.51
SCG3-203ENST00000558709 PRPF38BQ5VTL8 546 aaKnown RBP11.89□□□□□ -0.51
SCG3-203ENST00000558709 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
SCG3-203ENST00000558709 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
SCG3-203ENST00000558709 SLC19A1P41440 591 aa11.88□□□□□ -0.51
SCG3-203ENST00000558709 ZNF326Q5BKZ1 582 aaKnown RBP11.88□□□□□ -0.51
SCG3-203ENST00000558709 SPDYE5A6NIY4 337 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms