RNA–Protein interactions for RNA: ENST00000558604.1

ACAN-204, Transcript of aggrecan, humanhuman

TSL 2

Gene ACAN, Length 749 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-204ENST00000558604 PHF14O94880 888 aa20.06■□□□□ 0.8
ACAN-204ENST00000558604 CABP4P57796 275 aa20.06■□□□□ 0.8
ACAN-204ENST00000558604 MSL1Q68DK7 614 aa20.06■□□□□ 0.8
ACAN-204ENST00000558604 MAP3K5Q99683 1374 aa20.06■□□□□ 0.8
ACAN-204ENST00000558604 DIAPH1O60610 1272 aaKnown RBP20.05■□□□□ 0.8
ACAN-204ENST00000558604 ATP6V1AP38606 617 aa20.05■□□□□ 0.8
ACAN-204ENST00000558604 HMOX1P09601 288 aa20.04■□□□□ 0.8
ACAN-204ENST00000558604 ATG3Q9NT62 314 aa20.04■□□□□ 0.8
ACAN-204ENST00000558604 SCN11AQ9UI33 1791 aa20.03■□□□□ 0.8
ACAN-204ENST00000558604 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
ACAN-204ENST00000558604 LINC00116Q8NCU8 138 aa20.03■□□□□ 0.8
ACAN-204ENST00000558604 RBM42Q9BTD8 480 aaKnown RBP20.03■□□□□ 0.8
ACAN-204ENST00000558604 GNPATO15228 680 aa20.02■□□□□ 0.8
ACAN-204ENST00000558604 YY1P25490 414 aa20.02■□□□□ 0.8
ACAN-204ENST00000558604 ZNF831Q5JPB2 1677 aa20.01■□□□□ 0.79
ACAN-204ENST00000558604 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.01■□□□□ 0.79
ACAN-204ENST00000558604 ITPK1Q13572 414 aa20.01■□□□□ 0.79
ACAN-204ENST00000558604 VIRMAQ69YN4 1812 aaKnown RBP20.01■□□□□ 0.79
ACAN-204ENST00000558604 COL3A1P02461 1466 aaPredicted RBP20■□□□□ 0.79
ACAN-204ENST00000558604 COL5A3P25940 1745 aaPredicted RBP20■□□□□ 0.79
ACAN-204ENST00000558604 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
ACAN-204ENST00000558604 SSFA2P28290 1259 aa20■□□□□ 0.79
ACAN-204ENST00000558604 AKAP4Q5JQC9 854 aa19.99■□□□□ 0.79
ACAN-204ENST00000558604 PELP1Q8IZL8 1130 aaKnown RBP19.98■□□□□ 0.79
ACAN-204ENST00000558604 CFAP53Q96M91 514 aa19.98■□□□□ 0.79
ACAN-204ENST00000558604 AMIGO3Q86WK7 504 aa19.97■□□□□ 0.79
ACAN-204ENST00000558604 NFATC2IPQ8NCF5 419 aa19.97■□□□□ 0.79
ACAN-204ENST00000558604 PTCD1O75127 700 aaKnown RBP19.96■□□□□ 0.79
ACAN-204ENST00000558604 GPR162Q16538 588 aa19.96■□□□□ 0.79
ACAN-204ENST00000558604 SMIM5Q71RC9 77 aa19.96■□□□□ 0.79
ACAN-204ENST00000558604 MRC1P22897 1456 aa19.95■□□□□ 0.78
ACAN-204ENST00000558604 NLGN2Q8NFZ4 835 aa19.94■□□□□ 0.78
ACAN-204ENST00000558604 RTCBQ9Y3I0 505 aaKnown RBP19.94■□□□□ 0.78
ACAN-204ENST00000558604 TJP1Q07157 1748 aa19.93■□□□□ 0.78
ACAN-204ENST00000558604 MTHFSDQ2M296 383 aaKnown RBP19.93■□□□□ 0.78
ACAN-204ENST00000558604 SLC52A2Q9HAB3 445 aa19.93■□□□□ 0.78
ACAN-204ENST00000558604 CNTNAP4Q9C0A0 1308 aa19.93■□□□□ 0.78
ACAN-204ENST00000558604 CHD4Q14839 1912 aa19.92■□□□□ 0.78
ACAN-204ENST00000558604 CICQ96RK0 1608 aaPredicted RBP19.92■□□□□ 0.78
ACAN-204ENST00000558604 SLC4A9Q96Q91 983 aa19.92■□□□□ 0.78
ACAN-204ENST00000558604 ADAMTS7Q9UKP4 1686 aa19.91■□□□□ 0.78
ACAN-204ENST00000558604 RNMTO43148 476 aaKnown RBP19.91■□□□□ 0.78
ACAN-204ENST00000558604 TRAPPC3LQ5T215 181 aa19.91■□□□□ 0.78
ACAN-204ENST00000558604 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
ACAN-204ENST00000558604 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
ACAN-204ENST00000558604 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
ACAN-204ENST00000558604 PPP2R1AP30153 589 aa19.89■□□□□ 0.77
ACAN-204ENST00000558604 RC3H1Q5TC82 1133 aaKnown RBP19.89■□□□□ 0.77
ACAN-204ENST00000558604 GAS2L2Q8NHY3 880 aa19.89■□□□□ 0.77
ACAN-204ENST00000558604 CD2APQ9Y5K6 639 aa19.89■□□□□ 0.77
ACAN-204ENST00000558604 RFC4P35249 363 aa19.88■□□□□ 0.77
ACAN-204ENST00000558604 MYH14Q7Z406 1995 aaKnown RBP19.87■□□□□ 0.77
ACAN-204ENST00000558604 CRKLP46109 303 aaKnown RBP19.87■□□□□ 0.77
ACAN-204ENST00000558604 RPS6KA4O75676 772 aa19.86■□□□□ 0.77
ACAN-204ENST00000558604 MMP10P09238 476 aa19.86■□□□□ 0.77
ACAN-204ENST00000558604 PRKAR2BP31323 418 aa19.86■□□□□ 0.77
ACAN-204ENST00000558604 SLC39A6Q13433 755 aa19.86■□□□□ 0.77
ACAN-204ENST00000558604 KCPQ6ZWJ8 1503 aa19.86■□□□□ 0.77
ACAN-204ENST00000558604 GNAT3A8MTJ3 354 aa19.85■□□□□ 0.77
ACAN-204ENST00000558604 U2AF1L5P0DN76 240 aaPredicted RBP19.85■□□□□ 0.77
ACAN-204ENST00000558604 U2AF1Q01081 240 aaKnown RBP eCLIP19.85■□□□□ 0.77
ACAN-204ENST00000558604 TEFQ10587 303 aa19.85■□□□□ 0.77
ACAN-204ENST00000558604 TTC5Q8N0Z6 440 aa19.85■□□□□ 0.77
ACAN-204ENST00000558604 ARHGEF1Q92888 912 aaKnown RBP19.85■□□□□ 0.77
ACAN-204ENST00000558604 UBR2Q8IWV8 1755 aa19.85■□□□□ 0.77
ACAN-204ENST00000558604 DNAJC10Q8IXB1 793 aa19.83■□□□□ 0.77
ACAN-204ENST00000558604 NLGN1Q8N2Q7 840 aa19.83■□□□□ 0.77
ACAN-204ENST00000558604 SIPA1L3O60292 1781 aaPredicted RBP19.83■□□□□ 0.76
ACAN-204ENST00000558604 GRIN3BO60391 1043 aa19.82■□□□□ 0.76
ACAN-204ENST00000558604 RSPH6AQ9H0K4 717 aa19.82■□□□□ 0.76
ACAN-204ENST00000558604 CCDC87Q9NVE4 849 aa19.82■□□□□ 0.76
ACAN-204ENST00000558604 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
ACAN-204ENST00000558604 GYS1P13807 737 aa19.8■□□□□ 0.76
ACAN-204ENST00000558604 WWC3Q9ULE0 1092 aa19.8■□□□□ 0.76
ACAN-204ENST00000558604 USP42Q9H9J4 1324 aaKnown RBP19.79■□□□□ 0.76
ACAN-204ENST00000558604 KIF13BQ9NQT8 1826 aa19.79■□□□□ 0.76
ACAN-204ENST00000558604 PHACTR3Q96KR7 559 aa19.79■□□□□ 0.76
ACAN-204ENST00000558604 PARP3Q9Y6F1 533 aa19.79■□□□□ 0.76
ACAN-204ENST00000558604 NEFMP07197 916 aa19.78■□□□□ 0.76
ACAN-204ENST00000558604 INTS5Q6P9B9 1019 aaKnown RBP19.78■□□□□ 0.76
ACAN-204ENST00000558604 ZNF784Q8NCA9 323 aaPredicted RBP19.78■□□□□ 0.76
ACAN-204ENST00000558604 RTF1Q92541 710 aaKnown RBP19.78■□□□□ 0.76
ACAN-204ENST00000558604 SRP68Q9UHB9 627 aaKnown RBP19.78■□□□□ 0.76
ACAN-204ENST00000558604 C10orf71Q711Q0 1435 aa19.77■□□□□ 0.76
ACAN-204ENST00000558604 ZPR1O75312 459 aa19.77■□□□□ 0.76
ACAN-204ENST00000558604 FCHSD2O94868 740 aa19.77■□□□□ 0.76
ACAN-204ENST00000558604 CYP19A1P11511 503 aaPredicted RBP19.77■□□□□ 0.76
ACAN-204ENST00000558604 VSIG10Q8N0Z9 540 aa19.77■□□□□ 0.76
ACAN-204ENST00000558604 IL17REQ8NFR9 667 aa19.77■□□□□ 0.76
ACAN-204ENST00000558604 COL15A1P39059 1388 aa19.77■□□□□ 0.76
ACAN-204ENST00000558604 N4BP2Q86UW6 1770 aaPredicted RBP19.76■□□□□ 0.75
ACAN-204ENST00000558604 SOS1Q07889 1333 aaPredicted RBP19.76■□□□□ 0.75
ACAN-204ENST00000558604 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
ACAN-204ENST00000558604 CEMIPQ8WUJ3 1361 aa19.75■□□□□ 0.75
ACAN-204ENST00000558604 STARD3NLO95772 234 aa19.75■□□□□ 0.75
ACAN-204ENST00000558604 ZNF790Q6PG37 636 aa19.75■□□□□ 0.75
ACAN-204ENST00000558604 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
ACAN-204ENST00000558604 KIAA1551Q9HCM1 1747 aa19.73■□□□□ 0.75
ACAN-204ENST00000558604 UTRNP46939 3433 aa19.73■□□□□ 0.75
ACAN-204ENST00000558604 HEG1Q9ULI3 1381 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms