RNA–Protein interactions for RNA: ENST00000558376.5

RABGGTA-204, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-204ENST00000558376 ANKRD26Q9UPS8 1709 aa15.37■□□□□ 0.05
RABGGTA-204ENST00000558376 ATG3Q9NT62 314 aa15.36■□□□□ 0.05
RABGGTA-204ENST00000558376 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.36■□□□□ 0.051e-7■□□□□ 10.6
RABGGTA-204ENST00000558376 TMOD3Q9NYL9 352 aa15.36■□□□□ 0.05
RABGGTA-204ENST00000558376 GNPATO15228 680 aa15.35■□□□□ 0.05
RABGGTA-204ENST00000558376 PHKG2P15735 406 aa15.35■□□□□ 0.05
RABGGTA-204ENST00000558376 POLKQ9UBT6 870 aa15.35■□□□□ 0.05
RABGGTA-204ENST00000558376 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
RABGGTA-204ENST00000558376 HSPA6P17066 643 aa15.34■□□□□ 0.05
RABGGTA-204ENST00000558376 IFNL2Q8IZJ0 200 aa15.34■□□□□ 0.05
RABGGTA-204ENST00000558376 DDX10Q13206 875 aaKnown RBP15.33■□□□□ 0.05
RABGGTA-204ENST00000558376 MMP10P09238 476 aa15.33■□□□□ 0.04
RABGGTA-204ENST00000558376 SLC4A9Q96Q91 983 aa15.33■□□□□ 0.04
RABGGTA-204ENST00000558376 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.04
RABGGTA-204ENST00000558376 KIAA1551Q9HCM1 1747 aa15.32■□□□□ 0.04
RABGGTA-204ENST00000558376 N4BP2Q86UW6 1770 aaPredicted RBP15.32■□□□□ 0.04
RABGGTA-204ENST00000558376 KIF3CO14782 793 aa15.32■□□□□ 0.04
RABGGTA-204ENST00000558376 EIF4A2Q14240 407 aaKnown RBP15.31■□□□□ 0.04
RABGGTA-204ENST00000558376 CICQ96RK0 1608 aaPredicted RBP15.3■□□□□ 0.04
RABGGTA-204ENST00000558376 PXDNLA1KZ92 1463 aa15.3■□□□□ 0.04
RABGGTA-204ENST00000558376 KDRP35968 1356 aa15.3■□□□□ 0.04
RABGGTA-204ENST00000558376 MYH14Q7Z406 1995 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-204ENST00000558376 A0A0G2JLW4 131 aa15.29■□□□□ 0.04
RABGGTA-204ENST00000558376 TNNT2P45379 298 aaPredicted RBP15.29■□□□□ 0.04
RABGGTA-204ENST00000558376 TRAPPC3LQ5T215 181 aa15.29■□□□□ 0.04
RABGGTA-204ENST00000558376 MIER1Q8N108 512 aa15.29■□□□□ 0.04
RABGGTA-204ENST00000558376 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
RABGGTA-204ENST00000558376 ARHGEF1Q92888 912 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-204ENST00000558376 RBM42Q9BTD8 480 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-204ENST00000558376 ERVV-2B6SEH9 535 aa15.27■□□□□ 0.04
RABGGTA-204ENST00000558376 TGFB2P61812 414 aa15.27■□□□□ 0.04
RABGGTA-204ENST00000558376 RC3H1Q5TC82 1133 aaKnown RBP15.27■□□□□ 0.04
RABGGTA-204ENST00000558376 NLGN1Q8N2Q7 840 aa15.27■□□□□ 0.04
RABGGTA-204ENST00000558376 ZNF831Q5JPB2 1677 aa15.27■□□□□ 0.03
RABGGTA-204ENST00000558376 BCS1LQ9Y276 419 aa15.27■□□□□ 0.03
RABGGTA-204ENST00000558376 COL5A3P25940 1745 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-204ENST00000558376 GYS1P13807 737 aa15.26■□□□□ 0.03
RABGGTA-204ENST00000558376 DPEP1P16444 411 aa15.26■□□□□ 0.03
RABGGTA-204ENST00000558376 C10orf71Q711Q0 1435 aa15.26■□□□□ 0.03
RABGGTA-204ENST00000558376 RPS6KA4O75676 772 aa15.25■□□□□ 0.03
RABGGTA-204ENST00000558376 ARHGAP27Q6ZUM4 889 aa15.25■□□□□ 0.03
RABGGTA-204ENST00000558376 POLR3GLQ9BT43 218 aa15.25■□□□□ 0.03
RABGGTA-204ENST00000558376 BRCA1P38398 1863 aaKnown RBP15.25■□□□□ 0.03
RABGGTA-204ENST00000558376 C4AP0C0L4 1744 aa15.25■□□□□ 0.03
RABGGTA-204ENST00000558376 CNTNAP4Q9C0A0 1308 aa15.25■□□□□ 0.03
RABGGTA-204ENST00000558376 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
RABGGTA-204ENST00000558376 KDM6AO15550 1401 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-204ENST00000558376 ADRA2BP18089 450 aa15.24■□□□□ 0.03
RABGGTA-204ENST00000558376 PLEKHO1Q53GL0 409 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-204ENST00000558376 KCNA3P22001 575 aa15.23■□□□□ 0.03
RABGGTA-204ENST00000558376 RFC4P35249 363 aa15.23■□□□□ 0.03
RABGGTA-204ENST00000558376 ZNF530Q6P9A1 599 aaPredicted RBP15.23■□□□□ 0.03
RABGGTA-204ENST00000558376 CCDC87Q9NVE4 849 aa15.23■□□□□ 0.03
RABGGTA-204ENST00000558376 PLEKHG2Q9H7P9 1386 aa15.23■□□□□ 0.03
RABGGTA-204ENST00000558376 FCHSD2O94868 740 aa15.23■□□□□ 0.03
RABGGTA-204ENST00000558376 HSP90AB1P08238 724 aaKnown RBP15.23■□□□□ 0.03
RABGGTA-204ENST00000558376 CABP4P57796 275 aa15.22■□□□□ 0.03
RABGGTA-204ENST00000558376 AEBP1Q8IUX7 1158 aa15.22■□□□□ 0.03
RABGGTA-204ENST00000558376 NMRK2Q9NPI5 230 aa15.22■□□□□ 0.03
RABGGTA-204ENST00000558376 PARP3Q9Y6F1 533 aa15.22■□□□□ 0.03
RABGGTA-204ENST00000558376 DNAJC5GQ8N7S2 189 aa15.21■□□□□ 0.03
RABGGTA-204ENST00000558376 SRP68Q9UHB9 627 aaKnown RBP15.21■□□□□ 0.03
RABGGTA-204ENST00000558376 ARFGEF1Q9Y6D6 1849 aa15.21■□□□□ 0.02
RABGGTA-204ENST00000558376 PTCD1O75127 700 aaKnown RBP15.2■□□□□ 0.02
RABGGTA-204ENST00000558376 TOMM70O94826 608 aa15.2■□□□□ 0.02
RABGGTA-204ENST00000558376 KIF7Q2M1P5 1343 aa15.2■□□□□ 0.02
RABGGTA-204ENST00000558376 MTHFSP49914 203 aa15.2■□□□□ 0.02
RABGGTA-204ENST00000558376 APLP1P51693 650 aa15.2■□□□□ 0.02
RABGGTA-204ENST00000558376 AMOTQ4VCS5 1084 aa15.2■□□□□ 0.02
RABGGTA-204ENST00000558376 PANK3Q9H999 370 aa15.2■□□□□ 0.02
RABGGTA-204ENST00000558376 CRKLP46109 303 aaKnown RBP15.19■□□□□ 0.02
RABGGTA-204ENST00000558376 FKBP8Q14318 412 aa15.19■□□□□ 0.02
RABGGTA-204ENST00000558376 C9orf131Q5VYM1 1079 aa15.19■□□□□ 0.02
RABGGTA-204ENST00000558376 NFATC2IPQ8NCF5 419 aa15.19■□□□□ 0.02
RABGGTA-204ENST00000558376 DDR1Q08345 913 aa15.18■□□□□ 0.02
RABGGTA-204ENST00000558376 TJP1Q07157 1748 aa15.17■□□□□ 0.02
RABGGTA-204ENST00000558376 INTS5Q6P9B9 1019 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-204ENST00000558376 PIM2Q9P1W9 311 aa15.17■□□□□ 0.02
RABGGTA-204ENST00000558376 USP42Q9H9J4 1324 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-204ENST00000558376 SBF1O95248 1867 aa15.17■□□□□ 0.02
RABGGTA-204ENST00000558376 C1orf141Q5JVX7 400 aa15.16■□□□□ 0.02
RABGGTA-204ENST00000558376 SCN11AQ9UI33 1791 aa15.16■□□□□ 0.02
RABGGTA-204ENST00000558376 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
RABGGTA-204ENST00000558376 CHRNA5P30532 468 aa15.16■□□□□ 0.02
RABGGTA-204ENST00000558376 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
RABGGTA-204ENST00000558376 TM4SF1P30408 202 aa15.15■□□□□ 0.02
RABGGTA-204ENST00000558376 DALRD3Q5D0E6 543 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-204ENST00000558376 MORC1Q86VD1 984 aa15.14■□□□□ 0.01
RABGGTA-204ENST00000558376 RBM46Q8TBY0 533 aaKnown RBP15.14■□□□□ 0.01
RABGGTA-204ENST00000558376 IL13P35225 146 aa15.14■□□□□ 0.01
RABGGTA-204ENST00000558376 HTRA3P83110 453 aa15.14■□□□□ 0.01
RABGGTA-204ENST00000558376 DNAJC10Q8IXB1 793 aa15.14■□□□□ 0.01
RABGGTA-204ENST00000558376 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
RABGGTA-204ENST00000558376 WDR90Q96KV7 1748 aa15.13■□□□□ 0.01
RABGGTA-204ENST00000558376 KCPQ6ZWJ8 1503 aa15.13■□□□□ 0.01
RABGGTA-204ENST00000558376 LGR6Q9HBX8 967 aa15.12■□□□□ 0.01
RABGGTA-204ENST00000558376 RNF181Q9P0P0 153 aa15.12■□□□□ 0.01
RABGGTA-204ENST00000558376 AFDNP55196 1824 aaKnown RBP15.12■□□□□ 0.01
RABGGTA-204ENST00000558376 USPL1Q5W0Q7 1092 aa15.12■□□□□ 0.01
RABGGTA-204ENST00000558376 RRAGCQ9HB90 399 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms