RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
RORA-207ENST00000558234 CDCA7LQ96GN5 454 aa15.14■□□□□ 0.01
RORA-207ENST00000558234 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
RORA-207ENST00000558234 KRT27Q7Z3Y8 459 aa15.13■□□□□ 0.01
RORA-207ENST00000558234 GNAT3A8MTJ3 354 aa15.13■□□□□ 0.01
RORA-207ENST00000558234 IL16Q14005 1332 aa15.13■□□□□ 0.01
RORA-207ENST00000558234 LGR6Q9HBX8 967 aa15.13■□□□□ 0.01
RORA-207ENST00000558234 APAF1O14727 1248 aa15.12■□□□□ 0.01
RORA-207ENST00000558234 ZNF530Q6P9A1 599 aaPredicted RBP15.12■□□□□ 0.01
RORA-207ENST00000558234 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
RORA-207ENST00000558234 SCN7AQ01118 1682 aa15.11■□□□□ 0.01
RORA-207ENST00000558234 PTF1AQ7RTS3 328 aa15.11■□□□□ 0.01
RORA-207ENST00000558234 BABAM1Q9NWV8 329 aa15.11■□□□□ 0.01
RORA-207ENST00000558234 SLC52A2Q9HAB3 445 aa15.11■□□□□ 0.01
RORA-207ENST00000558234 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
RORA-207ENST00000558234 ILDR2Q71H61 639 aa15.1■□□□□ 0.01
RORA-207ENST00000558234 SUPT16HQ9Y5B9 1047 aaKnown RBP15.09■□□□□ 0.01
RORA-207ENST00000558234 WDR63Q8IWG1 891 aa15.08■□□□□ 0
RORA-207ENST00000558234 CCDC9Q9Y3X0 531 aaKnown RBP15.08■□□□□ 0
RORA-207ENST00000558234 CHL1O00533 1208 aa15.08■□□□□ 0
RORA-207ENST00000558234 RIPK4P57078 832 aa15.08■□□□□ 0
RORA-207ENST00000558234 FAM196AQ6ZSG2 479 aa15.08■□□□□ 0
RORA-207ENST00000558234 BCL11BQ9C0K0 894 aaPredicted RBP15.08■□□□□ 0
RORA-207ENST00000558234 PIGBQ92521 554 aa15.07■□□□□ 0
RORA-207ENST00000558234 ANKRD36CQ5JPF3 1778 aa15.07■□□□□ 0
RORA-207ENST00000558234 MAPK8IP3Q9UPT6 1336 aa15.07■□□□□ 0
RORA-207ENST00000558234 MPRIPQ6WCQ1 1025 aa15.06■□□□□ 0
RORA-207ENST00000558234 MCM10Q7L590 875 aa15.06■□□□□ 0
RORA-207ENST00000558234 KCNQ2O43526 872 aa15.06■□□□□ 0
RORA-207ENST00000558234 DCTN1Q14203 1278 aa15.05■□□□□ -0
RORA-207ENST00000558234 SLC4A9Q96Q91 983 aa15.05■□□□□ -0
RORA-207ENST00000558234 IFT57Q9NWB7 429 aa15.05■□□□□ -0
RORA-207ENST00000558234 RRP7AQ9Y3A4 280 aaKnown RBP15.05■□□□□ -0
RORA-207ENST00000558234 ARFGEF2Q9Y6D5 1785 aa15.05■□□□□ -0
RORA-207ENST00000558234 LMOD3Q0VAK6 560 aa15.04■□□□□ -0
RORA-207ENST00000558234 ATG3Q9NT62 314 aa15.04■□□□□ -0
RORA-207ENST00000558234 C1orf141Q5JVX7 400 aa15.04■□□□□ -0
RORA-207ENST00000558234 DDX54Q8TDD1 881 aaKnown RBP15.04■□□□□ -0
RORA-207ENST00000558234 SENP3-EIF4A1A0A087X0R7 540 aa15.03■□□□□ -0
RORA-207ENST00000558234 GOLGA2Q08379 1002 aa15.03■□□□□ -0
RORA-207ENST00000558234 FAM182BQ5T319 152 aa15.03■□□□□ -0
RORA-207ENST00000558234 CFAP44Q96MT7 982 aa15.03■□□□□ -0
RORA-207ENST00000558234 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
RORA-207ENST00000558234 NRXN2Q9P2S2 1712 aa15.03■□□□□ -0
RORA-207ENST00000558234 PLSCR1O15162 318 aa15.02■□□□□ -0
RORA-207ENST00000558234 ERICH6BQ5W0A0 696 aa15.02■□□□□ -0
RORA-207ENST00000558234 PROM2Q8N271 834 aa15.02□□□□□ -0.01
RORA-207ENST00000558234 PRIM1P49642 420 aaKnown RBP15.01□□□□□ -0.01
RORA-207ENST00000558234 NFATC2IPQ8NCF5 419 aa15.01□□□□□ -0.01
RORA-207ENST00000558234 E9PSI1 815 aa15.01□□□□□ -0.01
RORA-207ENST00000558234 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
RORA-207ENST00000558234 CAMKK2Q96RR4 588 aa15□□□□□ -0.01
RORA-207ENST00000558234 PALLDQ8WX93 1383 aa15□□□□□ -0.01
RORA-207ENST00000558234 LRP10Q7Z4F1 713 aa15□□□□□ -0.01
RORA-207ENST00000558234 MBIPQ9NS73 344 aa14.99□□□□□ -0.01
RORA-207ENST00000558234 KCNQ3O43525 872 aa14.99□□□□□ -0.01
RORA-207ENST00000558234 EIF4A1P60842 406 aaKnown RBP14.99□□□□□ -0.01
RORA-207ENST00000558234 VSIG10Q8N0Z9 540 aa14.99□□□□□ -0.01
RORA-207ENST00000558234 FANCIQ9NVI1 1328 aa14.99□□□□□ -0.01
RORA-207ENST00000558234 ZNF790Q6PG37 636 aa14.98□□□□□ -0.01
RORA-207ENST00000558234 CCDC125Q86Z20 511 aa14.98□□□□□ -0.01
RORA-207ENST00000558234 UPF1Q92900 1129 aaKnown RBP eCLIP14.98□□□□□ -0.01
RORA-207ENST00000558234 NUP98P52948 1817 aa14.98□□□□□ -0.01
RORA-207ENST00000558234 LAMB2P55268 1798 aa14.98□□□□□ -0.01
RORA-207ENST00000558234 ASAP1Q9ULH1 1129 aa14.98□□□□□ -0.01
RORA-207ENST00000558234 SOS1Q07889 1333 aaPredicted RBP14.98□□□□□ -0.01
RORA-207ENST00000558234 KIF13BQ9NQT8 1826 aa14.97□□□□□ -0.01
RORA-207ENST00000558234 KIAA1551Q9HCM1 1747 aa14.96□□□□□ -0.01
RORA-207ENST00000558234 RRP1P56182 461 aaKnown RBP14.96□□□□□ -0.01
RORA-207ENST00000558234 ACSBG1Q96GR2 724 aa14.96□□□□□ -0.01
RORA-207ENST00000558234 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
RORA-207ENST00000558234 RCAN3Q9UKA8 241 aa14.96□□□□□ -0.01
RORA-207ENST00000558234 LRRC4BQ9NT99 713 aa14.96□□□□□ -0.01
RORA-207ENST00000558234 CABP4P57796 275 aa14.95□□□□□ -0.02
RORA-207ENST00000558234 TRIM37O94972 964 aa14.95□□□□□ -0.02
RORA-207ENST00000558234 HOXB7P09629 217 aa14.95□□□□□ -0.02
RORA-207ENST00000558234 GNAI1P63096 354 aa14.94□□□□□ -0.02
RORA-207ENST00000558234 CALD1Q05682 793 aaKnown RBP14.94□□□□□ -0.02
RORA-207ENST00000558234 SALL2Q9Y467 1007 aaPredicted RBP14.94□□□□□ -0.02
RORA-207ENST00000558234 ITPK1Q13572 414 aa14.94□□□□□ -0.02
RORA-207ENST00000558234 RTF1Q92541 710 aaKnown RBP14.94□□□□□ -0.02
RORA-207ENST00000558234 BTBD11A6QL63 1104 aa14.94□□□□□ -0.02
RORA-207ENST00000558234 ZNF496Q96IT1 587 aaPredicted RBP14.94□□□□□ -0.02
RORA-207ENST00000558234 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
RORA-207ENST00000558234 PDIA6Q15084 440 aa14.93□□□□□ -0.02
RORA-207ENST00000558234 CNTNAP4Q9C0A0 1308 aa14.93□□□□□ -0.02
RORA-207ENST00000558234 NEFMP07197 916 aa14.93□□□□□ -0.02
RORA-207ENST00000558234 SLC27A3Q5K4L6 730 aa14.93□□□□□ -0.02
RORA-207ENST00000558234 AKT1S1Q96B36 256 aa14.93□□□□□ -0.02
RORA-207ENST00000558234 BRPF1P55201 1214 aaPredicted RBP14.92□□□□□ -0.02
RORA-207ENST00000558234 FKBP8Q14318 412 aa14.92□□□□□ -0.02
RORA-207ENST00000558234 SLC39A6Q13433 755 aa14.92□□□□□ -0.02
RORA-207ENST00000558234 SMARCC1Q92922 1105 aaPredicted RBP14.92□□□□□ -0.02
RORA-207ENST00000558234 IBTKQ9P2D0 1353 aaPredicted RBP14.92□□□□□ -0.02
RORA-207ENST00000558234 AFDNP55196 1824 aaKnown RBP14.91□□□□□ -0.02
RORA-207ENST00000558234 NEUROD2Q15784 382 aa14.91□□□□□ -0.02
RORA-207ENST00000558234 MIS18AQ9NYP9 233 aa14.91□□□□□ -0.02
RORA-207ENST00000558234 PRAMEF22A3QJZ6 481 aa14.91□□□□□ -0.02
RORA-207ENST00000558234 C8orf58Q8NAV2 365 aa14.91□□□□□ -0.02
RORA-207ENST00000558234 LINC00116Q8NCU8 138 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms