RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 DCAF5Q96JK2 942 aa26.06■■□□□ 1.76
SNRPA1-205ENST00000558036 PCDH11XQ9BZA7 1347 aa26.06■■□□□ 1.76
SNRPA1-205ENST00000558036 PCDH11YQ9BZA8 1340 aa26.06■■□□□ 1.76
SNRPA1-205ENST00000558036 VIRMAQ69YN4 1812 aaKnown RBP26.06■■□□□ 1.76
SNRPA1-205ENST00000558036 ADAMTS7Q9UKP4 1686 aa26.06■■□□□ 1.76
SNRPA1-205ENST00000558036 MVPQ14764 893 aaKnown RBP26.06■■□□□ 1.76
SNRPA1-205ENST00000558036 TMEM57Q8N5G2 664 aa26.05■■□□□ 1.76
SNRPA1-205ENST00000558036 SLC52A2Q9HAB3 445 aa26.05■■□□□ 1.76
SNRPA1-205ENST00000558036 SLC4A2P04920 1241 aa26.05■■□□□ 1.76
SNRPA1-205ENST00000558036 PLCH1Q4KWH8 1693 aa26.04■■□□□ 1.76
SNRPA1-205ENST00000558036 MS4A1P11836 297 aa26.04■■□□□ 1.76
SNRPA1-205ENST00000558036 ITPRIPQ8IWB1 547 aa26.04■■□□□ 1.76
SNRPA1-205ENST00000558036 JCADQ9P266 1359 aa26.04■■□□□ 1.76
SNRPA1-205ENST00000558036 SLC39A6Q13433 755 aa26.03■■□□□ 1.76
SNRPA1-205ENST00000558036 KDM3BQ7LBC6 1761 aa26.03■■□□□ 1.76
SNRPA1-205ENST00000558036 HSP90AB1P08238 724 aaKnown RBP26.02■■□□□ 1.76
SNRPA1-205ENST00000558036 ARHGAP45Q92619 1136 aa26.02■■□□□ 1.76
SNRPA1-205ENST00000558036 SCN11AQ9UI33 1791 aa26.01■■□□□ 1.76
SNRPA1-205ENST00000558036 G2E3Q7L622 706 aa26■■□□□ 1.75
SNRPA1-205ENST00000558036 SIPA1L3O60292 1781 aaPredicted RBP26■■□□□ 1.75
SNRPA1-205ENST00000558036 EIF2S2P20042 333 aaKnown RBP25.99■■□□□ 1.75
SNRPA1-205ENST00000558036 HSPA1LP34931 641 aa25.99■■□□□ 1.75
SNRPA1-205ENST00000558036 C8orf37Q96NL8 207 aa25.99■■□□□ 1.75
SNRPA1-205ENST00000558036 CABP4P57796 275 aa25.99■■□□□ 1.75
SNRPA1-205ENST00000558036 HDGFL1Q5TGJ6 251 aa25.99■■□□□ 1.75
SNRPA1-205ENST00000558036 CCDC30Q5VVM6 783 aa25.99■■□□□ 1.75
SNRPA1-205ENST00000558036 PELP1Q8IZL8 1130 aaKnown RBP25.98■■□□□ 1.75
SNRPA1-205ENST00000558036 STK31Q9BXU1 1019 aa25.98■■□□□ 1.75
SNRPA1-205ENST00000558036 PRAMEF22A3QJZ6 481 aa25.97■■□□□ 1.75
SNRPA1-205ENST00000558036 ZNF790Q6PG37 636 aa25.97■■□□□ 1.75
SNRPA1-205ENST00000558036 DISP2A7MBM2 1401 aa25.97■■□□□ 1.75
SNRPA1-205ENST00000558036 SHANK3Q9BYB0 1731 aa25.97■■□□□ 1.75
SNRPA1-205ENST00000558036 API5Q9BZZ5 524 aaKnown RBP25.96■■□□□ 1.75
SNRPA1-205ENST00000558036 NRAPQ86VF7 1730 aa25.96■■□□□ 1.75
SNRPA1-205ENST00000558036 ABCC4O15439 1325 aa25.96■■□□□ 1.75
SNRPA1-205ENST00000558036 SPATA31A1Q5TZJ5 1347 aa25.96■■□□□ 1.75
SNRPA1-205ENST00000558036 DDX19BQ9UMR2 479 aa25.96■■□□□ 1.75
SNRPA1-205ENST00000558036 CCDC9Q9Y3X0 531 aaKnown RBP25.96■■□□□ 1.75
SNRPA1-205ENST00000558036 SLIT2O94813 1529 aa25.95■■□□□ 1.75
SNRPA1-205ENST00000558036 MRC1P22897 1456 aa25.95■■□□□ 1.75
SNRPA1-205ENST00000558036 SOS1Q07889 1333 aaPredicted RBP25.95■■□□□ 1.75
SNRPA1-205ENST00000558036 RGS12O14924 1447 aa25.95■■□□□ 1.74
SNRPA1-205ENST00000558036 NGLY1Q96IV0 654 aa25.95■■□□□ 1.74
SNRPA1-205ENST00000558036 GIGYF1O75420 1035 aaPredicted RBP25.94■■□□□ 1.74
SNRPA1-205ENST00000558036 NKX1-1Q15270 411 aaPredicted RBP25.94■■□□□ 1.74
SNRPA1-205ENST00000558036 PCDHB15Q9Y5E8 787 aa25.94■■□□□ 1.74
SNRPA1-205ENST00000558036 HEG1Q9ULI3 1381 aa25.93■■□□□ 1.74
SNRPA1-205ENST00000558036 LRP6O75581 1613 aa25.93■■□□□ 1.74
SNRPA1-205ENST00000558036 PTPRCP08575 1304 aa25.92■■□□□ 1.74
SNRPA1-205ENST00000558036 KDM2BQ8NHM5 1336 aa25.92■■□□□ 1.74
SNRPA1-205ENST00000558036 HOXB7P09629 217 aa25.92■■□□□ 1.74
SNRPA1-205ENST00000558036 ZNF496Q96IT1 587 aaPredicted RBP25.91■■□□□ 1.74
SNRPA1-205ENST00000558036 CHPF2Q9P2E5 772 aa25.91■■□□□ 1.74
SNRPA1-205ENST00000558036 F6X3S4 739 aa25.91■■□□□ 1.74
SNRPA1-205ENST00000558036 IGHDP01880 384 aa25.91■■□□□ 1.74
SNRPA1-205ENST00000558036 FLIIQ13045 1269 aa25.91■■□□□ 1.74
SNRPA1-205ENST00000558036 SPATA31A5Q5VU36 1347 aa25.91■■□□□ 1.74
SNRPA1-205ENST00000558036 SPATA31A7Q8IWB4 1347 aa25.91■■□□□ 1.74
SNRPA1-205ENST00000558036 ANXA1P04083 346 aa25.9■■□□□ 1.74
SNRPA1-205ENST00000558036 TTC5Q8N0Z6 440 aa25.9■■□□□ 1.74
SNRPA1-205ENST00000558036 ERVV-2B6SEH9 535 aa25.9■■□□□ 1.74
SNRPA1-205ENST00000558036 UNC5CLQ8IV45 518 aa25.9■■□□□ 1.74
SNRPA1-205ENST00000558036 PHAXQ9H814 394 aaKnown RBP25.9■■□□□ 1.74
SNRPA1-205ENST00000558036 SPATA31A6Q5VVP1 1343 aa25.89■■□□□ 1.74
SNRPA1-205ENST00000558036 EXOC5O00471 708 aa25.89■■□□□ 1.74
SNRPA1-205ENST00000558036 SKAP1Q86WV1 359 aa25.89■■□□□ 1.74
SNRPA1-205ENST00000558036 ZBTB40Q9NUA8 1239 aa25.88■■□□□ 1.73
SNRPA1-205ENST00000558036 FKBP5Q13451 457 aaPredicted RBP25.88■■□□□ 1.73
SNRPA1-205ENST00000558036 AAMPQ13685 434 aa25.88■■□□□ 1.73
SNRPA1-205ENST00000558036 NWD2Q9ULI1 1742 aa25.88■■□□□ 1.73
SNRPA1-205ENST00000558036 BCL9LQ86UU0 1499 aa25.88■■□□□ 1.73
SNRPA1-205ENST00000558036 CENPQQ7L2Z9 268 aaPredicted RBP25.87■■□□□ 1.73
SNRPA1-205ENST00000558036 ZBTB7BO15156 539 aaPredicted RBP25.87■■□□□ 1.73
SNRPA1-205ENST00000558036 SLC4A10Q6U841 1118 aa25.87■■□□□ 1.73
SNRPA1-205ENST00000558036 THRAP3Q9Y2W1 955 aaKnown RBP25.87■■□□□ 1.73
SNRPA1-205ENST00000558036 PROSER3Q2NL68 480 aa25.85■■□□□ 1.73
SNRPA1-205ENST00000558036 TOGARAM1Q9Y4F4 1720 aa25.85■■□□□ 1.73
SNRPA1-205ENST00000558036 INTS3Q68E01 1043 aaKnown RBP25.84■■□□□ 1.73
SNRPA1-205ENST00000558036 C1orf115Q9H7X2 142 aa25.84■■□□□ 1.73
SNRPA1-205ENST00000558036 TNS2Q63HR2 1409 aa25.84■■□□□ 1.73
SNRPA1-205ENST00000558036 DDB1Q16531 1140 aa25.84■■□□□ 1.73
SNRPA1-205ENST00000558036 FNBP4Q8N3X1 1017 aaPredicted RBP25.84■■□□□ 1.73
SNRPA1-205ENST00000558036 FMNL2Q96PY5 1086 aa25.84■■□□□ 1.73
SNRPA1-205ENST00000558036 WNK3Q9BYP7 1800 aa25.83■■□□□ 1.73
SNRPA1-205ENST00000558036 CDCA7Q9BWT1 371 aaPredicted RBP25.82■■□□□ 1.72
SNRPA1-205ENST00000558036 TMOD3Q9NYL9 352 aa25.82■■□□□ 1.72
SNRPA1-205ENST00000558036 DBF4Q9UBU7 674 aaPredicted RBP25.82■■□□□ 1.72
SNRPA1-205ENST00000558036 FAM98CQ17RN3 349 aaKnown RBP25.82■■□□□ 1.72
SNRPA1-205ENST00000558036 MEX3CQ5U5Q3 659 aaKnown RBP25.82■■□□□ 1.72
SNRPA1-205ENST00000558036 USP21Q9UK80 565 aa25.82■■□□□ 1.72
SNRPA1-205ENST00000558036 USP16Q9Y5T5 823 aa25.81■■□□□ 1.72
SNRPA1-205ENST00000558036 C5P01031 1676 aa25.81■■□□□ 1.72
SNRPA1-205ENST00000558036 PTCD1O75127 700 aaKnown RBP25.81■■□□□ 1.72
SNRPA1-205ENST00000558036 SNRPA1P09661 255 aaKnown RBP25.81■■□□□ 1.72
SNRPA1-205ENST00000558036 VPS72Q15906 364 aa25.8■■□□□ 1.72
SNRPA1-205ENST00000558036 BARGINQ6ZT62 677 aa25.8■■□□□ 1.72
SNRPA1-205ENST00000558036 PIGBQ92521 554 aa25.8■■□□□ 1.72
SNRPA1-205ENST00000558036 CHMP4AQ9BY43 222 aa25.8■■□□□ 1.72
SNRPA1-205ENST00000558036 PIP4K2AP48426 406 aaPredicted RBP25.78■■□□□ 1.72
SNRPA1-205ENST00000558036 PDIA6Q15084 440 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms