RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ERVV-2B6SEH9 535 aa21.22■□□□□ 0.99
TUBB3-214ENST00000557490 GRIN3BO60391 1043 aa21.22■□□□□ 0.99
TUBB3-214ENST00000557490 U2AF1L5P0DN76 240 aaPredicted RBP21.22■□□□□ 0.99
TUBB3-214ENST00000557490 U2AF1Q01081 240 aaKnown RBP eCLIP21.22■□□□□ 0.99
TUBB3-214ENST00000557490 GPBP1L1Q9HC44 474 aaPredicted RBP21.22■□□□□ 0.99
TUBB3-214ENST00000557490 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
TUBB3-214ENST00000557490 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
TUBB3-214ENST00000557490 SLC16A10Q8TF71 515 aa21.21■□□□□ 0.99
TUBB3-214ENST00000557490 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
TUBB3-214ENST00000557490 CCNL1Q9UK58 526 aaPredicted RBP21.21■□□□□ 0.99
TUBB3-214ENST00000557490 TOGARAM1Q9Y4F4 1720 aa21.21■□□□□ 0.99
TUBB3-214ENST00000557490 CABP4P57796 275 aa21.2■□□□□ 0.98
TUBB3-214ENST00000557490 MTHFSDQ2M296 383 aaKnown RBP21.2■□□□□ 0.98
TUBB3-214ENST00000557490 PALLDQ8WX93 1383 aa21.2■□□□□ 0.98
TUBB3-214ENST00000557490 HMGB2P26583 209 aaKnown RBP21.19■□□□□ 0.98
TUBB3-214ENST00000557490 TUBGCP6Q96RT7 1819 aa21.19■□□□□ 0.98
TUBB3-214ENST00000557490 KCNQ4P56696 695 aa21.18■□□□□ 0.98
TUBB3-214ENST00000557490 ADCY9O60503 1353 aa21.18■□□□□ 0.98
TUBB3-214ENST00000557490 KDM6AO15550 1401 aaPredicted RBP21.18■□□□□ 0.98
TUBB3-214ENST00000557490 PRKAR2BP31323 418 aa21.17■□□□□ 0.98
TUBB3-214ENST00000557490 GAS2L2Q8NHY3 880 aa21.17■□□□□ 0.98
TUBB3-214ENST00000557490 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
TUBB3-214ENST00000557490 RSPH6AQ9H0K4 717 aa21.17■□□□□ 0.98
TUBB3-214ENST00000557490 PNPLA7Q6ZV29 1317 aa21.16■□□□□ 0.98
TUBB3-214ENST00000557490 MYBBP1AQ9BQG0 1328 aaKnown RBP21.16■□□□□ 0.98
TUBB3-214ENST00000557490 FCHSD2O94868 740 aa21.16■□□□□ 0.98
TUBB3-214ENST00000557490 ASAP1Q9ULH1 1129 aa21.16■□□□□ 0.98
TUBB3-214ENST00000557490 ITGB4P16144 1822 aa21.15■□□□□ 0.98
TUBB3-214ENST00000557490 ZNF526Q8TF50 670 aaPredicted RBP21.15■□□□□ 0.98
TUBB3-214ENST00000557490 ATG3Q9NT62 314 aa21.14■□□□□ 0.97
TUBB3-214ENST00000557490 LY75O60449 1722 aa21.14■□□□□ 0.97
TUBB3-214ENST00000557490 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
TUBB3-214ENST00000557490 NFATC2IPQ8NCF5 419 aa21.13■□□□□ 0.97
TUBB3-214ENST00000557490 LOC102724428A0A0B4J2F2 783 aa21.12■□□□□ 0.97
TUBB3-214ENST00000557490 SIK1P57059 783 aa21.12■□□□□ 0.97
TUBB3-214ENST00000557490 PHACTR3Q96KR7 559 aa21.12■□□□□ 0.97
TUBB3-214ENST00000557490 PRKRIP1Q9H875 184 aaPredicted RBP21.12■□□□□ 0.97
TUBB3-214ENST00000557490 LGR6Q9HBX8 967 aa21.12■□□□□ 0.97
TUBB3-214ENST00000557490 TFCP2L1Q9NZI6 479 aa21.12■□□□□ 0.97
TUBB3-214ENST00000557490 GNAT3A8MTJ3 354 aa21.11■□□□□ 0.97
TUBB3-214ENST00000557490 NEFMP07197 916 aa21.11■□□□□ 0.97
TUBB3-214ENST00000557490 SLC52A2Q9HAB3 445 aa21.1■□□□□ 0.97
TUBB3-214ENST00000557490 PNNQ9H307 717 aaKnown RBP21.09■□□□□ 0.97
TUBB3-214ENST00000557490 ATP6V1AP38606 617 aa21.08■□□□□ 0.97
TUBB3-214ENST00000557490 RBM42Q9BTD8 480 aaKnown RBP21.08■□□□□ 0.97
TUBB3-214ENST00000557490 APLP1P51693 650 aa21.06■□□□□ 0.96
TUBB3-214ENST00000557490 DNAJC5GQ8N7S2 189 aa21.06■□□□□ 0.96
TUBB3-214ENST00000557490 SCN11AQ9UI33 1791 aa21.05■□□□□ 0.96
TUBB3-214ENST00000557490 KIF3CO14782 793 aa21.05■□□□□ 0.96
TUBB3-214ENST00000557490 CAPN15O75808 1086 aa21.05■□□□□ 0.96
TUBB3-214ENST00000557490 TEFQ10587 303 aa21.05■□□□□ 0.96
TUBB3-214ENST00000557490 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
TUBB3-214ENST00000557490 RTF1Q92541 710 aaKnown RBP21.05■□□□□ 0.96
TUBB3-214ENST00000557490 AK7Q96M32 723 aa21.05■□□□□ 0.96
TUBB3-214ENST00000557490 PTCD1O75127 700 aaKnown RBP21.04■□□□□ 0.96
TUBB3-214ENST00000557490 ITPK1Q13572 414 aa21.04■□□□□ 0.96
TUBB3-214ENST00000557490 LINC00116Q8NCU8 138 aa21.04■□□□□ 0.96
TUBB3-214ENST00000557490 MRC1P22897 1456 aa21.04■□□□□ 0.96
TUBB3-214ENST00000557490 MAPK8IP3Q9UPT6 1336 aa21.04■□□□□ 0.96
TUBB3-214ENST00000557490 COL13A1Q5TAT6 717 aaPredicted RBP21.03■□□□□ 0.96
TUBB3-214ENST00000557490 C5P01031 1676 aa21.02■□□□□ 0.96
TUBB3-214ENST00000557490 MSH5O43196 834 aa21.02■□□□□ 0.96
TUBB3-214ENST00000557490 WDR43Q15061 677 aaKnown RBP eCLIP21.02■□□□□ 0.96
TUBB3-214ENST00000557490 FLAD1Q8NFF5 587 aa21.02■□□□□ 0.96
TUBB3-214ENST00000557490 PLEKHF1Q96S99 279 aa21.02■□□□□ 0.96
TUBB3-214ENST00000557490 HTATSF1O43719 755 aaKnown RBP21.01■□□□□ 0.95
TUBB3-214ENST00000557490 SLC4A9Q96Q91 983 aa21.01■□□□□ 0.95
TUBB3-214ENST00000557490 ADAMTS7Q9UKP4 1686 aa21.01■□□□□ 0.95
TUBB3-214ENST00000557490 SLC39A6Q13433 755 aa21■□□□□ 0.95
TUBB3-214ENST00000557490 CEMIPQ8WUJ3 1361 aa20.99■□□□□ 0.95
TUBB3-214ENST00000557490 C4BP0C0L5 1744 aa20.99■□□□□ 0.95
TUBB3-214ENST00000557490 COL23A1Q86Y22 540 aaPredicted RBP20.99■□□□□ 0.95
TUBB3-214ENST00000557490 TTC5Q8N0Z6 440 aa20.99■□□□□ 0.95
TUBB3-214ENST00000557490 GNPATO15228 680 aa20.98■□□□□ 0.95
TUBB3-214ENST00000557490 ANP32CO43423 234 aa20.98■□□□□ 0.95
TUBB3-214ENST00000557490 NFE2L2Q16236 605 aa20.98■□□□□ 0.95
TUBB3-214ENST00000557490 MCM10Q7L590 875 aa20.98■□□□□ 0.95
TUBB3-214ENST00000557490 CD2APQ9Y5K6 639 aa20.98■□□□□ 0.95
TUBB3-214ENST00000557490 PCNTO95613 3336 aa20.98■□□□□ 0.95
TUBB3-214ENST00000557490 TAF1LQ8IZX4 1826 aa20.97■□□□□ 0.95
TUBB3-214ENST00000557490 PHF14O94880 888 aa20.97■□□□□ 0.95
TUBB3-214ENST00000557490 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
TUBB3-214ENST00000557490 MSL1Q68DK7 614 aa20.97■□□□□ 0.95
TUBB3-214ENST00000557490 WDR90Q96KV7 1748 aa20.97■□□□□ 0.95
TUBB3-214ENST00000557490 SSFA2P28290 1259 aa20.96■□□□□ 0.95
TUBB3-214ENST00000557490 CNTNAP4Q9C0A0 1308 aa20.96■□□□□ 0.95
TUBB3-214ENST00000557490 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.95■□□□□ 0.94
TUBB3-214ENST00000557490 BTBD11A6QL63 1104 aa20.95■□□□□ 0.94
TUBB3-214ENST00000557490 PRELPP51888 382 aa20.95■□□□□ 0.94
TUBB3-214ENST00000557490 DCTN1Q14203 1278 aa20.95■□□□□ 0.94
TUBB3-214ENST00000557490 ZNF831Q5JPB2 1677 aa20.95■□□□□ 0.94
TUBB3-214ENST00000557490 ZNF790Q6PG37 636 aa20.94■□□□□ 0.94
TUBB3-214ENST00000557490 RTCBQ9Y3I0 505 aaKnown RBP20.94■□□□□ 0.94
TUBB3-214ENST00000557490 AMIGO3Q86WK7 504 aa20.93■□□□□ 0.94
TUBB3-214ENST00000557490 DNAJC10Q8IXB1 793 aa20.93■□□□□ 0.94
TUBB3-214ENST00000557490 VSIG10Q8N0Z9 540 aa20.93■□□□□ 0.94
TUBB3-214ENST00000557490 ADAMTS8Q9UP79 889 aa20.93■□□□□ 0.94
TUBB3-214ENST00000557490 VIRMAQ69YN4 1812 aaKnown RBP20.92■□□□□ 0.94
TUBB3-214ENST00000557490 CRKLP46109 303 aaKnown RBP20.92■□□□□ 0.94
TUBB3-214ENST00000557490 SMIM5Q71RC9 77 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms