RNA–Protein interactions for RNA: ENST00000557364.5

CHD8-213, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD8, Length 8,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-213ENST00000557364 UHRF1BP1LA0JNW5 1464 aa9.83□□□□□ -0.84
CHD8-213ENST00000557364 NEBLO76041 1014 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 DBF4Q9UBU7 674 aaPredicted RBP9.82□□□□□ -0.84
CHD8-213ENST00000557364 DUOX2Q9NRD8 1548 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 NEK4P51957 841 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 PANK1Q8TE04 598 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 RAPGEF6Q8TEU7 1601 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 BIVM-ERCC5R4GMW8 1640 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 POLD1P28340 1107 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 MATR3P43243 847 aaKnown RBP eCLIP9.82□□□□□ -0.84
CHD8-213ENST00000557364 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.82□□□□□ -0.84
CHD8-213ENST00000557364 RFC4P35249 363 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 PPFIBP1Q86W92 1011 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 CEP57L1Q8IYX8 460 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 CCDC39Q9UFE4 941 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 KRT28Q7Z3Y7 464 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 CTCFLQ8NI51 663 aaPredicted RBP9.82□□□□□ -0.84
CHD8-213ENST00000557364 NUP133Q8WUM0 1156 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 HDAC9Q9UKV0 1011 aa9.82□□□□□ -0.84
CHD8-213ENST00000557364 TMEM266Q2M3C6 531 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 PDILTQ8N807 584 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 ZNF592Q92610 1267 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 PTPRCP08575 1304 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 ADAMTS2O95450 1211 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 NF2P35240 595 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 ZNF444Q8N0Y2 327 aaPredicted RBP9.81□□□□□ -0.84
CHD8-213ENST00000557364 BCL11BQ9C0K0 894 aaPredicted RBP9.81□□□□□ -0.84
CHD8-213ENST00000557364 CABP5Q9NP86 173 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 UNC13AQ9UPW8 1703 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 MVPQ14764 893 aaKnown RBP9.81□□□□□ -0.84
CHD8-213ENST00000557364 KIF5BP33176 963 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 BICDL1Q6ZP65 573 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 STXBP4Q6ZWJ1 553 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 C16orf71Q8IYS4 520 aaPredicted RBP9.81□□□□□ -0.84
CHD8-213ENST00000557364 NAPBQ9H115 298 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 DEF6Q9H4E7 631 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 ABCF2Q9UG63 623 aa9.81□□□□□ -0.84
CHD8-213ENST00000557364 IDH1O75874 414 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 NYXQ9GZU5 481 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 KDM5BQ9UGL1 1544 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 CDCA7Q9BWT1 371 aaPredicted RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 SIL1Q9H173 461 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 UBAP1LF5GYI3 381 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 CCDC192P0DO97 292 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 EIF2AK4Q9P2K8 1649 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 PAXIP1Q6ZW49 1069 aaPredicted RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 TRMT112Q9UI30 125 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 SCAF11Q99590 1463 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 EZRP15311 586 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 GSE1Q14687 1217 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 EIF4G3O43432 1585 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 GOLGA6L10A6NI86 522 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 NOM1Q5C9Z4 860 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 CAVIN1Q6NZI2 390 aaKnown RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 ZNF397Q8NF99 534 aaPredicted RBP9.8□□□□□ -0.84
CHD8-213ENST00000557364 SCLT1Q96NL6 688 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 PLEKHH1Q9ULM0 1364 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 VPS36Q86VN1 386 aa9.8□□□□□ -0.84
CHD8-213ENST00000557364 SEPT7Q16181 437 aaKnown RBP9.79□□□□□ -0.84
CHD8-213ENST00000557364 AMER1Q5JTC6 1135 aaPredicted RBP9.79□□□□□ -0.84
CHD8-213ENST00000557364 ZHX3Q9H4I2 956 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 ATP2B1P20020 1258 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 FOSBP53539 338 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 PDE4BQ07343 736 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 KIF21AQ7Z4S6 1674 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 BAG4O95429 457 aaKnown RBP9.79□□□□□ -0.84
CHD8-213ENST00000557364 MPRIPQ6WCQ1 1025 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 CETN1Q12798 172 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 RRS1Q15050 365 aaKnown RBP9.79□□□□□ -0.84
CHD8-213ENST00000557364 ME1P48163 572 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 MTERF4Q7Z6M4 381 aaKnown RBP9.79□□□□□ -0.84
CHD8-213ENST00000557364 BICRAQ9NZM4 1560 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 SMTNL1A8MU46 457 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 TMPOP42166 694 aaKnown RBP9.79□□□□□ -0.84
CHD8-213ENST00000557364 TSG101Q99816 390 aa9.79□□□□□ -0.84
CHD8-213ENST00000557364 CCDC152Q4G0S7 254 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 JAKMIP3Q5VZ66 844 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 LRRC27Q9C0I9 530 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 RTN4Q9NQC3 1192 aaKnown RBP9.78□□□□□ -0.84
CHD8-213ENST00000557364 TRIM5Q9C035 493 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 NBPF1Q3BBV0 1214 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 DUSP27Q5VZP5 1158 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 OGFOD1Q8N543 542 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 FEZ1Q99689 392 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 TANGO6Q9C0B7 1094 aa9.78□□□□□ -0.84
CHD8-213ENST00000557364 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.78□□□□□ -0.84
CHD8-213ENST00000557364 CWC25Q9NXE8 425 aaPredicted RBP9.78□□□□□ -0.84
CHD8-213ENST00000557364 PTCD1O75127 700 aaKnown RBP9.77□□□□□ -0.84
CHD8-213ENST00000557364 CCDC191Q8NCU4 936 aa9.77□□□□□ -0.84
CHD8-213ENST00000557364 FOXO3O43524 673 aa9.77□□□□□ -0.84
CHD8-213ENST00000557364 GBP2P32456 591 aaPredicted RBP9.77□□□□□ -0.84
CHD8-213ENST00000557364 DRC1Q96MC2 740 aa9.77□□□□□ -0.84
CHD8-213ENST00000557364 KIF4AO95239 1232 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 CATIPQ7Z7H3 387 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 UQCRFS1P1P0C7P4 283 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 LARP1BQ659C4 914 aaKnown RBP9.77□□□□□ -0.85
CHD8-213ENST00000557364 ANKRD36BQ8N2N9 1353 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 CFAP74Q9C0B2 1584 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 RSPH6AQ9H0K4 717 aa9.77□□□□□ -0.85
CHD8-213ENST00000557364 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms