RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 TJP1Q07157 1748 aa19.3■□□□□ 0.68
SNX6-210ENST00000557341 AEBP1Q8IUX7 1158 aa19.29■□□□□ 0.68
SNX6-210ENST00000557341 DCAF5Q96JK2 942 aa19.29■□□□□ 0.68
SNX6-210ENST00000557341 MYH14Q7Z406 1995 aaKnown RBP19.28■□□□□ 0.68
SNX6-210ENST00000557341 ERVV-2B6SEH9 535 aa19.28■□□□□ 0.68
SNX6-210ENST00000557341 LINC00116Q8NCU8 138 aa19.28■□□□□ 0.68
SNX6-210ENST00000557341 ATG3Q9NT62 314 aa19.28■□□□□ 0.68
SNX6-210ENST00000557341 KIF13BQ9NQT8 1826 aa19.28■□□□□ 0.68
SNX6-210ENST00000557341 ADAMTS7Q9UKP4 1686 aa19.27■□□□□ 0.68
SNX6-210ENST00000557341 PHF14O94880 888 aa19.27■□□□□ 0.68
SNX6-210ENST00000557341 SSFA2P28290 1259 aa19.27■□□□□ 0.68
SNX6-210ENST00000557341 ATP6V1AP38606 617 aa19.27■□□□□ 0.68
SNX6-210ENST00000557341 C1orf141Q5JVX7 400 aa19.27■□□□□ 0.68
SNX6-210ENST00000557341 SULT6B1Q6IMI4 303 aa19.27■□□□□ 0.68
SNX6-210ENST00000557341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.26■□□□□ 0.67
SNX6-210ENST00000557341 IL13P35225 146 aa19.26■□□□□ 0.67
SNX6-210ENST00000557341 GPR162Q16538 588 aa19.26■□□□□ 0.67
SNX6-210ENST00000557341 AMIGO3Q86WK7 504 aa19.26■□□□□ 0.67
SNX6-210ENST00000557341 NLGN2Q8NFZ4 835 aa19.26■□□□□ 0.67
SNX6-210ENST00000557341 ITPK1Q13572 414 aa19.25■□□□□ 0.67
SNX6-210ENST00000557341 MRC1P22897 1456 aa19.24■□□□□ 0.67
SNX6-210ENST00000557341 GNPATO15228 680 aa19.24■□□□□ 0.67
SNX6-210ENST00000557341 PER1O15534 1290 aaPredicted RBP19.24■□□□□ 0.67
SNX6-210ENST00000557341 MTHFSP49914 203 aa19.24■□□□□ 0.67
SNX6-210ENST00000557341 NPC1L1Q9UHC9 1359 aa19.23■□□□□ 0.67
SNX6-210ENST00000557341 CABP4P57796 275 aa19.23■□□□□ 0.67
SNX6-210ENST00000557341 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
SNX6-210ENST00000557341 UBR2Q8IWV8 1755 aa19.23■□□□□ 0.67
SNX6-210ENST00000557341 COL3A1P02461 1466 aaPredicted RBP19.22■□□□□ 0.67
SNX6-210ENST00000557341 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
SNX6-210ENST00000557341 SMIM5Q71RC9 77 aa19.21■□□□□ 0.67
SNX6-210ENST00000557341 RBM42Q9BTD8 480 aaKnown RBP19.21■□□□□ 0.67
SNX6-210ENST00000557341 KIAA1551Q9HCM1 1747 aa19.21■□□□□ 0.67
SNX6-210ENST00000557341 SIPA1L3O60292 1781 aaPredicted RBP19.21■□□□□ 0.67
SNX6-210ENST00000557341 N4BP2Q86UW6 1770 aaPredicted RBP19.2■□□□□ 0.66
SNX6-210ENST00000557341 CD2APQ9Y5K6 639 aa19.2■□□□□ 0.66
SNX6-210ENST00000557341 ZNF784Q8NCA9 323 aaPredicted RBP19.19■□□□□ 0.66
SNX6-210ENST00000557341 SLC4A9Q96Q91 983 aa19.19■□□□□ 0.66
SNX6-210ENST00000557341 BRCA1P38398 1863 aaKnown RBP19.19■□□□□ 0.66
SNX6-210ENST00000557341 CNTNAP4Q9C0A0 1308 aa19.19■□□□□ 0.66
SNX6-210ENST00000557341 DIAPH1O60610 1272 aaKnown RBP19.18■□□□□ 0.66
SNX6-210ENST00000557341 AKAP4Q5JQC9 854 aa19.18■□□□□ 0.66
SNX6-210ENST00000557341 RTCBQ9Y3I0 505 aaKnown RBP19.18■□□□□ 0.66
SNX6-210ENST00000557341 HMOX1P09601 288 aa19.17■□□□□ 0.66
SNX6-210ENST00000557341 ADRA2BP18089 450 aa19.16■□□□□ 0.66
SNX6-210ENST00000557341 RC3H1Q5TC82 1133 aaKnown RBP19.16■□□□□ 0.66
SNX6-210ENST00000557341 NFATC2IPQ8NCF5 419 aa19.16■□□□□ 0.66
SNX6-210ENST00000557341 GRIN3BO60391 1043 aa19.15■□□□□ 0.66
SNX6-210ENST00000557341 YBX3P16989 372 aaKnown RBP eCLIP19.15■□□□□ 0.665e-10■■□□□ 13
SNX6-210ENST00000557341 KCPQ6ZWJ8 1503 aa19.15■□□□□ 0.66
SNX6-210ENST00000557341 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
SNX6-210ENST00000557341 TRAPPC3LQ5T215 181 aa19.14■□□□□ 0.65
SNX6-210ENST00000557341 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
SNX6-210ENST00000557341 SLC52A2Q9HAB3 445 aa19.13■□□□□ 0.65
SNX6-210ENST00000557341 MMP10P09238 476 aa19.12■□□□□ 0.65
SNX6-210ENST00000557341 ARFGEF1Q9Y6D6 1849 aa19.11■□□□□ 0.65
SNX6-210ENST00000557341 RPS6KA4O75676 772 aa19.11■□□□□ 0.65
SNX6-210ENST00000557341 C10orf71Q711Q0 1435 aa19.1■□□□□ 0.65
SNX6-210ENST00000557341 AFDNP55196 1824 aaKnown RBP19.1■□□□□ 0.65
SNX6-210ENST00000557341 RNMTO43148 476 aaKnown RBP19.1■□□□□ 0.65
SNX6-210ENST00000557341 RFC4P35249 363 aa19.1■□□□□ 0.65
SNX6-210ENST00000557341 CRKLP46109 303 aaKnown RBP19.1■□□□□ 0.65
SNX6-210ENST00000557341 MTHFSDQ2M296 383 aaKnown RBP19.1■□□□□ 0.65
SNX6-210ENST00000557341 ARHGEF1Q92888 912 aaKnown RBP19.1■□□□□ 0.65
SNX6-210ENST00000557341 PXDNLA1KZ92 1463 aa19.09■□□□□ 0.65
SNX6-210ENST00000557341 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
SNX6-210ENST00000557341 NLGN1Q8N2Q7 840 aa19.09■□□□□ 0.65
SNX6-210ENST00000557341 LGR6Q9HBX8 967 aa19.09■□□□□ 0.65
SNX6-210ENST00000557341 GYS1P13807 737 aa19.08■□□□□ 0.64
SNX6-210ENST00000557341 DLG5Q8TDM6 1919 aa19.06■□□□□ 0.64
SNX6-210ENST00000557341 SCN7AQ01118 1682 aa19.06■□□□□ 0.64
SNX6-210ENST00000557341 CFAP53Q96M91 514 aa19.06■□□□□ 0.64
SNX6-210ENST00000557341 DLEC1Q9Y238 1755 aa19.06■□□□□ 0.64
SNX6-210ENST00000557341 USP42Q9H9J4 1324 aaKnown RBP19.05■□□□□ 0.64
SNX6-210ENST00000557341 GAS2L2Q8NHY3 880 aa19.05■□□□□ 0.64
SNX6-210ENST00000557341 NRXN2Q9P2S2 1712 aa19.05■□□□□ 0.64
SNX6-210ENST00000557341 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
SNX6-210ENST00000557341 DNAJC10Q8IXB1 793 aa19.04■□□□□ 0.64
SNX6-210ENST00000557341 CCDC87Q9NVE4 849 aa19.04■□□□□ 0.64
SNX6-210ENST00000557341 WWC3Q9ULE0 1092 aa19.04■□□□□ 0.64
SNX6-210ENST00000557341 INTS5Q6P9B9 1019 aaKnown RBP19.03■□□□□ 0.64
SNX6-210ENST00000557341 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
SNX6-210ENST00000557341 ATP10DQ9P241 1426 aa19.02■□□□□ 0.64
SNX6-210ENST00000557341 GNAT3A8MTJ3 354 aa19.02■□□□□ 0.64
SNX6-210ENST00000557341 TGFB2P61812 414 aa19.02■□□□□ 0.64
SNX6-210ENST00000557341 ADCY9O60503 1353 aa19.02■□□□□ 0.64
SNX6-210ENST00000557341 COL15A1P39059 1388 aa19.02■□□□□ 0.64
SNX6-210ENST00000557341 SOS1Q07889 1333 aaPredicted RBP19.01■□□□□ 0.63
SNX6-210ENST00000557341 BCORQ6W2J9 1755 aa19.01■□□□□ 0.63
SNX6-210ENST00000557341 CYP19A1P11511 503 aaPredicted RBP19.01■□□□□ 0.63
SNX6-210ENST00000557341 TEFQ10587 303 aa19.01■□□□□ 0.63
SNX6-210ENST00000557341 TTC5Q8N0Z6 440 aa19.01■□□□□ 0.63
SNX6-210ENST00000557341 VSIG10Q8N0Z9 540 aa19.01■□□□□ 0.63
SNX6-210ENST00000557341 SRP68Q9UHB9 627 aaKnown RBP19.01■□□□□ 0.63
SNX6-210ENST00000557341 GIGYF1O75420 1035 aaPredicted RBP19■□□□□ 0.63
SNX6-210ENST00000557341 NUDCQ9Y266 331 aa19■□□□□ 0.63
SNX6-210ENST00000557341 LAMB4A4D0S4 1761 aa18.99■□□□□ 0.63
SNX6-210ENST00000557341 PPP2R1AP30153 589 aa18.99■□□□□ 0.63
SNX6-210ENST00000557341 PRKAR2BP31323 418 aa18.99■□□□□ 0.63
SNX6-210ENST00000557341 FKBP8Q14318 412 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms