RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 NPHP4O75161 1426 aaPredicted RBP23.91■■□□□ 1.42
FOXN3-214ENST00000557258 GNAI2P04899 355 aa23.91■■□□□ 1.42
FOXN3-214ENST00000557258 SDSP20132 328 aa23.91■■□□□ 1.42
FOXN3-214ENST00000557258 LRRFIP2Q9Y608 721 aaKnown RBP23.91■■□□□ 1.42
FOXN3-214ENST00000557258 CHPF2Q9P2E5 772 aa23.89■■□□□ 1.41
FOXN3-214ENST00000557258 IL27Q8NEV9 243 aa23.88■■□□□ 1.41
FOXN3-214ENST00000557258 NFAT5O94916 1531 aa23.88■■□□□ 1.41
FOXN3-214ENST00000557258 RGPD2P0DJD1 1756 aa23.88■■□□□ 1.41
FOXN3-214ENST00000557258 HSP90AB1P08238 724 aaKnown RBP23.88■■□□□ 1.41
FOXN3-214ENST00000557258 KCNH5Q8NCM2 988 aa23.87■■□□□ 1.41
FOXN3-214ENST00000557258 ANKRD24Q8TF21 1146 aa23.87■■□□□ 1.41
FOXN3-214ENST00000557258 PRAMEF22A3QJZ6 481 aa23.87■■□□□ 1.41
FOXN3-214ENST00000557258 HMMRO75330 724 aa23.87■■□□□ 1.41
FOXN3-214ENST00000557258 TEFQ10587 303 aa23.87■■□□□ 1.41
FOXN3-214ENST00000557258 KRT28Q7Z3Y7 464 aa23.86■■□□□ 1.41
FOXN3-214ENST00000557258 RTN4Q9NQC3 1192 aaKnown RBP23.86■■□□□ 1.41
FOXN3-214ENST00000557258 BTBD11A6QL63 1104 aa23.86■■□□□ 1.41
FOXN3-214ENST00000557258 GZF1Q9H116 711 aaPredicted RBP23.86■■□□□ 1.41
FOXN3-214ENST00000557258 BRPF3Q9ULD4 1205 aa23.86■■□□□ 1.41
FOXN3-214ENST00000557258 HSP90AA1P07900 732 aaKnown RBP23.85■■□□□ 1.41
FOXN3-214ENST00000557258 EIF4A1P60842 406 aaKnown RBP23.85■■□□□ 1.41
FOXN3-214ENST00000557258 ARHGEF25Q86VW2 580 aa23.85■■□□□ 1.41
FOXN3-214ENST00000557258 USP44Q9H0E7 712 aa23.85■■□□□ 1.41
FOXN3-214ENST00000557258 CABLES1Q8TDN4 633 aa23.84■■□□□ 1.41
FOXN3-214ENST00000557258 IL1RAPL2Q9NP60 686 aa23.84■■□□□ 1.41
FOXN3-214ENST00000557258 LRRC37A3O60309 1634 aa23.84■■□□□ 1.41
FOXN3-214ENST00000557258 PXDNQ92626 1479 aa23.83■■□□□ 1.41
FOXN3-214ENST00000557258 CHMP5Q9NZZ3 219 aa23.82■■□□□ 1.4
FOXN3-214ENST00000557258 CEMIPQ8WUJ3 1361 aa23.81■■□□□ 1.4
FOXN3-214ENST00000557258 PI4KAP2A4QPH2 592 aa23.81■■□□□ 1.4
FOXN3-214ENST00000557258 UBTFL1P0CB47 393 aaPredicted RBP23.81■■□□□ 1.4
FOXN3-214ENST00000557258 PDE1AP54750 535 aa23.81■■□□□ 1.4
FOXN3-214ENST00000557258 PI4KAP1Q8N8J0 262 aa23.81■■□□□ 1.4
FOXN3-214ENST00000557258 NBPF7P0C2Y1 421 aaPredicted RBP23.81■■□□□ 1.4
FOXN3-214ENST00000557258 C1orf141Q5JVX7 400 aa23.81■■□□□ 1.4
FOXN3-214ENST00000557258 FAM208AQ9UK61 1670 aaKnown RBP23.81■■□□□ 1.4
FOXN3-214ENST00000557258 GNAI3P08754 354 aa23.8■■□□□ 1.4
FOXN3-214ENST00000557258 PROSER3Q2NL68 480 aa23.8■■□□□ 1.4
FOXN3-214ENST00000557258 PLEKHO1Q53GL0 409 aaPredicted RBP23.79■■□□□ 1.4
FOXN3-214ENST00000557258 ZNF142P52746 1687 aaPredicted RBP23.79■■□□□ 1.4
FOXN3-214ENST00000557258 ADAMTSL3P82987 1691 aa23.79■■□□□ 1.4
FOXN3-214ENST00000557258 LRRCC1Q9C099 1032 aa23.79■■□□□ 1.4
FOXN3-214ENST00000557258 AKAP4Q5JQC9 854 aa23.78■■□□□ 1.4
FOXN3-214ENST00000557258 MAP4K4O95819 1239 aaPredicted RBP23.77■■□□□ 1.4
FOXN3-214ENST00000557258 MCM4P33991 863 aa23.77■■□□□ 1.4
FOXN3-214ENST00000557258 RILPL2Q969X0 211 aa23.77■■□□□ 1.4
FOXN3-214ENST00000557258 USP26Q9BXU7 913 aa23.77■■□□□ 1.4
FOXN3-214ENST00000557258 RNMTO43148 476 aaKnown RBP23.77■■□□□ 1.4
FOXN3-214ENST00000557258 ATP8B2P98198 1209 aa23.77■■□□□ 1.4
FOXN3-214ENST00000557258 NUTM1Q86Y26 1132 aa23.77■■□□□ 1.4
FOXN3-214ENST00000557258 SNX21Q969T3 373 aa23.77■■□□□ 1.4
FOXN3-214ENST00000557258 TRIM6-TRIM34B2RNG4 842 aa23.77■■□□□ 1.39
FOXN3-214ENST00000557258 CHRNA2Q15822 529 aa23.77■■□□□ 1.39
FOXN3-214ENST00000557258 SRCIN1Q9C0H9 1055 aa23.77■■□□□ 1.39
FOXN3-214ENST00000557258 NLRP2Q9NX02 1062 aa23.77■■□□□ 1.39
FOXN3-214ENST00000557258 HSPA2P54652 639 aa23.76■■□□□ 1.39
FOXN3-214ENST00000557258 SLC39A6Q13433 755 aa23.76■■□□□ 1.39
FOXN3-214ENST00000557258 PPP1R42Q7Z4L9 355 aa23.76■■□□□ 1.39
FOXN3-214ENST00000557258 K7ELQ4 463 aaPredicted RBP23.75■■□□□ 1.39
FOXN3-214ENST00000557258 USP54Q70EL1 1684 aa23.75■■□□□ 1.39
FOXN3-214ENST00000557258 MX1P20591 662 aa23.74■■□□□ 1.39
FOXN3-214ENST00000557258 AIMP1Q12904 312 aaKnown RBP23.74■■□□□ 1.39
FOXN3-214ENST00000557258 UNC5CLQ8IV45 518 aa23.74■■□□□ 1.39
FOXN3-214ENST00000557258 SURF6O75683 361 aaKnown RBP23.74■■□□□ 1.39
FOXN3-214ENST00000557258 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
FOXN3-214ENST00000557258 SRGAP3O43295 1099 aa23.73■■□□□ 1.39
FOXN3-214ENST00000557258 CASC1Q6TDU7 716 aa23.73■■□□□ 1.39
FOXN3-214ENST00000557258 DNAAF4Q8WXU2 420 aa23.73■■□□□ 1.39
FOXN3-214ENST00000557258 C1orf167Q5SNV9 1468 aa23.72■■□□□ 1.39
FOXN3-214ENST00000557258 ATF3P18847 181 aa23.72■■□□□ 1.39
FOXN3-214ENST00000557258 TNPO1Q92973 898 aaKnown RBP23.72■■□□□ 1.39
FOXN3-214ENST00000557258 PIP4K2AP48426 406 aaPredicted RBP23.72■■□□□ 1.39
FOXN3-214ENST00000557258 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
FOXN3-214ENST00000557258 BABAM1Q9NWV8 329 aa23.71■■□□□ 1.39
FOXN3-214ENST00000557258 DDIT3P35638 169 aa23.71■■□□□ 1.39
FOXN3-214ENST00000557258 IBTKQ9P2D0 1353 aaPredicted RBP23.71■■□□□ 1.39
FOXN3-214ENST00000557258 CSB-PGBD3P0DP91 1061 aa23.7■■□□□ 1.39
FOXN3-214ENST00000557258 AMOTQ4VCS5 1084 aa23.7■■□□□ 1.39
FOXN3-214ENST00000557258 BEND3Q5T5X7 828 aa23.7■■□□□ 1.39
FOXN3-214ENST00000557258 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
FOXN3-214ENST00000557258 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
FOXN3-214ENST00000557258 ERBB3P21860 1342 aa23.7■■□□□ 1.38
FOXN3-214ENST00000557258 MAP3K2Q9Y2U5 619 aa23.7■■□□□ 1.38
FOXN3-214ENST00000557258 SOS1Q07889 1333 aaPredicted RBP23.69■■□□□ 1.38
FOXN3-214ENST00000557258 ADCY9O60503 1353 aa23.69■■□□□ 1.38
FOXN3-214ENST00000557258 GIGYF1O75420 1035 aaPredicted RBP23.68■■□□□ 1.38
FOXN3-214ENST00000557258 ERC2O15083 957 aa23.68■■□□□ 1.38
FOXN3-214ENST00000557258 NOL8Q76FK4 1167 aaKnown RBP23.68■■□□□ 1.38
FOXN3-214ENST00000557258 SALL3Q9BXA9 1300 aa23.68■■□□□ 1.38
FOXN3-214ENST00000557258 SSFA2P28290 1259 aa23.67■■□□□ 1.38
FOXN3-214ENST00000557258 IL25Q9H293 177 aa23.67■■□□□ 1.38
FOXN3-214ENST00000557258 TRAK2O60296 914 aa23.67■■□□□ 1.38
FOXN3-214ENST00000557258 MYL6BP14649 208 aa23.67■■□□□ 1.38
FOXN3-214ENST00000557258 RGPD5Q99666 1765 aa23.66■■□□□ 1.38
FOXN3-214ENST00000557258 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
FOXN3-214ENST00000557258 OSBPL3Q9H4L5 887 aa23.66■■□□□ 1.38
FOXN3-214ENST00000557258 NFATC2IPQ8NCF5 419 aa23.66■■□□□ 1.38
FOXN3-214ENST00000557258 SSH3Q8TE77 659 aa23.66■■□□□ 1.38
FOXN3-214ENST00000557258 ANO2Q9NQ90 1003 aa23.66■■□□□ 1.38
FOXN3-214ENST00000557258 DBF4Q9UBU7 674 aaPredicted RBP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms