RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 TRPM1Q7Z4N2 1603 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 NUP188Q5SRE5 1749 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 PEAK1Q9H792 1746 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 MFSD10Q14728 455 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
VRK1-206ENST00000557222 SPON1Q9HCB6 807 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 LHX6Q9UPM6 363 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 AXIN2Q9Y2T1 843 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 RGPD3A6NKT7 1758 aaPredicted RBP12.38□□□□□ -0.43
VRK1-206ENST00000557222 COL18A1P39060 1754 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 RGPD4Q7Z3J3 1758 aa12.38□□□□□ -0.43
VRK1-206ENST00000557222 CPSF1Q10570 1443 aaKnown RBP12.37□□□□□ -0.43
VRK1-206ENST00000557222 KCNQ2O43526 872 aa12.37□□□□□ -0.43
VRK1-206ENST00000557222 ROCK2O75116 1388 aaKnown RBP12.37□□□□□ -0.43
VRK1-206ENST00000557222 SBNO2Q9Y2G9 1366 aa12.36□□□□□ -0.43
VRK1-206ENST00000557222 ZBTB7CA1YPR0 619 aa12.36□□□□□ -0.43
VRK1-206ENST00000557222 TBC1D12O60347 775 aa12.36□□□□□ -0.43
VRK1-206ENST00000557222 OXER1Q8TDS5 423 aa12.36□□□□□ -0.43
VRK1-206ENST00000557222 ABCC6O95255 1503 aa12.36□□□□□ -0.43
VRK1-206ENST00000557222 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
VRK1-206ENST00000557222 CCDC7Q96M83 1385 aa12.35□□□□□ -0.43
VRK1-206ENST00000557222 NINLQ9Y2I6 1382 aa12.35□□□□□ -0.43
VRK1-206ENST00000557222 SPNS2Q8IVW8 549 aa12.35□□□□□ -0.43
VRK1-206ENST00000557222 MARCH10Q8NA82 808 aaPredicted RBP12.35□□□□□ -0.43
VRK1-206ENST00000557222 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
VRK1-206ENST00000557222 LRRC37A3O60309 1634 aa12.34□□□□□ -0.43
VRK1-206ENST00000557222 USP31Q70CQ4 1352 aa12.34□□□□□ -0.43
VRK1-206ENST00000557222 EXOC5O00471 708 aa12.34□□□□□ -0.43
VRK1-206ENST00000557222 PAXIP1Q6ZW49 1069 aaPredicted RBP12.34□□□□□ -0.43
VRK1-206ENST00000557222 CFAP44Q96MT7 982 aa12.34□□□□□ -0.43
VRK1-206ENST00000557222 PPP1R1BQ9UD71 204 aaPredicted RBP12.34□□□□□ -0.43
VRK1-206ENST00000557222 KTN1Q86UP2 1357 aaKnown RBP12.33□□□□□ -0.44
VRK1-206ENST00000557222 CSB-PGBD3P0DP91 1061 aa12.33□□□□□ -0.44
VRK1-206ENST00000557222 PUS7Q96PZ0 661 aaKnown RBP12.33□□□□□ -0.44
VRK1-206ENST00000557222 SIN3AQ96ST3 1273 aa12.33□□□□□ -0.44
VRK1-206ENST00000557222 AKAP12Q02952 1782 aa12.33□□□□□ -0.44
VRK1-206ENST00000557222 NFAT5O94916 1531 aa12.32□□□□□ -0.44
VRK1-206ENST00000557222 WNK3Q9BYP7 1800 aa12.31□□□□□ -0.44
VRK1-206ENST00000557222 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
VRK1-206ENST00000557222 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
VRK1-206ENST00000557222 SLC24A1O60721 1099 aa12.29□□□□□ -0.44
VRK1-206ENST00000557222 YY1P25490 414 aa12.29□□□□□ -0.44
VRK1-206ENST00000557222 TXNRD1Q16881 649 aa12.29□□□□□ -0.44
VRK1-206ENST00000557222 PTF1AQ7RTS3 328 aa12.29□□□□□ -0.44
VRK1-206ENST00000557222 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
VRK1-206ENST00000557222 TNS2Q63HR2 1409 aa12.28□□□□□ -0.44
VRK1-206ENST00000557222 SLC15A2Q16348 729 aa12.28□□□□□ -0.44
VRK1-206ENST00000557222 HDGFL2Q7Z4V5 671 aaPredicted RBP12.28□□□□□ -0.44
VRK1-206ENST00000557222 CARD11Q9BXL7 1154 aa12.28□□□□□ -0.44
VRK1-206ENST00000557222 STK32BQ9NY57 414 aa12.28□□□□□ -0.44
VRK1-206ENST00000557222 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
VRK1-206ENST00000557222 RGPD5Q99666 1765 aa12.28□□□□□ -0.44
VRK1-206ENST00000557222 IL2RBP14784 551 aa12.27□□□□□ -0.45
VRK1-206ENST00000557222 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.45
VRK1-206ENST00000557222 CASZ1Q86V15 1759 aa12.27□□□□□ -0.45
VRK1-206ENST00000557222 EDC4Q6P2E9 1401 aaKnown RBP12.27□□□□□ -0.45
VRK1-206ENST00000557222 MMRN1Q13201 1228 aa12.26□□□□□ -0.45
VRK1-206ENST00000557222 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■□□□□ 9.4
VRK1-206ENST00000557222 CD163L1Q9NR16 1453 aa12.26□□□□□ -0.45
VRK1-206ENST00000557222 PTGER2P43116 358 aa12.25□□□□□ -0.45
VRK1-206ENST00000557222 NME9Q86XW9 330 aa12.25□□□□□ -0.45
VRK1-206ENST00000557222 MTFR1LQ9H019 292 aa12.25□□□□□ -0.45
VRK1-206ENST00000557222 EMILIN3Q9NT22 766 aa12.25□□□□□ -0.45
VRK1-206ENST00000557222 NLRP2Q9NX02 1062 aa12.25□□□□□ -0.45
VRK1-206ENST00000557222 POTEEQ6S8J3 1075 aa12.24□□□□□ -0.45
VRK1-206ENST00000557222 TMC1Q8TDI8 760 aa12.24□□□□□ -0.45
VRK1-206ENST00000557222 ANKRD24Q8TF21 1146 aa12.24□□□□□ -0.45
VRK1-206ENST00000557222 SLC12A5Q9H2X9 1139 aa12.24□□□□□ -0.45
VRK1-206ENST00000557222 ZBTB7AO95365 584 aa12.23□□□□□ -0.45
VRK1-206ENST00000557222 IP6K1Q92551 441 aa12.23□□□□□ -0.45
VRK1-206ENST00000557222 NHSQ6T4R5 1651 aa12.22□□□□□ -0.45
VRK1-206ENST00000557222 PBX2P40425 430 aa12.22□□□□□ -0.45
VRK1-206ENST00000557222 PDGFDQ9GZP0 370 aaPredicted RBP12.22□□□□□ -0.45
VRK1-206ENST00000557222 UTRNP46939 3433 aa12.22□□□□□ -0.45
VRK1-206ENST00000557222 A0A1W2PP64 1363 aa12.21□□□□□ -0.45
VRK1-206ENST00000557222 MAP3K9P80192 1104 aa12.21□□□□□ -0.45
VRK1-206ENST00000557222 CAMK2BQ13554 666 aa12.21□□□□□ -0.45
VRK1-206ENST00000557222 SLC27A3Q5K4L6 730 aa12.21□□□□□ -0.45
VRK1-206ENST00000557222 MAP3K5Q99683 1374 aa12.2□□□□□ -0.46
VRK1-206ENST00000557222 EVI5O60447 810 aa12.2□□□□□ -0.46
VRK1-206ENST00000557222 SLC16A10Q8TF71 515 aa12.2□□□□□ -0.46
VRK1-206ENST00000557222 ACSBG1Q96GR2 724 aa12.2□□□□□ -0.46
VRK1-206ENST00000557222 SYT17Q9BSW7 474 aa12.2□□□□□ -0.46
VRK1-206ENST00000557222 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
VRK1-206ENST00000557222 LTN1O94822 1766 aa12.2□□□□□ -0.46
VRK1-206ENST00000557222 TONSLQ96HA7 1378 aa12.19□□□□□ -0.46
VRK1-206ENST00000557222 LSM11P83369 360 aaKnown RBP eCLIP12.19□□□□□ -0.461e-6■■■■■ 28.9
VRK1-206ENST00000557222 PPP4R3BQ5MIZ7 849 aa12.19□□□□□ -0.46
VRK1-206ENST00000557222 COG3Q96JB2 828 aa12.19□□□□□ -0.46
VRK1-206ENST00000557222 TESK2Q96S53 571 aa12.19□□□□□ -0.46
VRK1-206ENST00000557222 FHDC1Q9C0D6 1143 aaPredicted RBP12.19□□□□□ -0.46
VRK1-206ENST00000557222 HMGB2P26583 209 aaKnown RBP12.18□□□□□ -0.46
VRK1-206ENST00000557222 ANKRD13DQ6ZTN6 518 aa12.18□□□□□ -0.46
VRK1-206ENST00000557222 ARXQ96QS3 562 aa12.18□□□□□ -0.46
VRK1-206ENST00000557222 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
VRK1-206ENST00000557222 MYOM1P52179 1685 aa12.17□□□□□ -0.46
VRK1-206ENST00000557222 FAM208AQ9UK61 1670 aaKnown RBP12.17□□□□□ -0.46
VRK1-206ENST00000557222 BTAF1O14981 1849 aa12.16□□□□□ -0.46
VRK1-206ENST00000557222 CGNL1Q0VF96 1302 aa12.16□□□□□ -0.46
VRK1-206ENST00000557222 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms